Hpro002288.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hypena proboscidalis
Gene Symbol
JARID2
Assembly
GCA_905147285.1
Location
LR990126.1:4234576-4245315[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-19 5e-16 60.0 0.0 6 89 778 858 774 858 0.91

Sequence Information

Coding Sequence
ATGGGCAGAAATTCAGTGCTCTCCTTGGACAACAAGCTCCTGATATATAACTCCATTATTAAACCCATATGGACATAtggtatccagctgtggggAGTCGCCAGCAAGAGTAATGTCATGTGCCTGCAAAGGGTACAAAACAACATTCTTAGGAACATTACAAACGCTCCATGGTTCACAAGGAACGGCGAGATCCATGAGACCACAAGGAGGGTGACAGCACAGCGGAAGTTCGCACAAGGTGCGTTCGTACCACCCGCGGCGTCGGCGGCTCCGGCTAGTCCCTTTACCACCGCAGCCGTTGCTACGCCCTCCACCTCCGCCGGCCCCTCCGAACGCAGACACCATCCTGACCTAGGAAATGAAACTAACACATTTAGGAGTCACATGACCGCACCAGTTCTGCTGGATCTAATATCTTTTCCATCAAGCGTAATAGAGCCACAGAATCTTGAGCAAAACAACACTTTGTCTCCAAGACCAAATGTGTCAGATGTGGCAACAGAATATAATGATACCATCAATGAGGAAACTCAACCAATTGTTTTAGTTGAGAGACTGCAGAAAAAGGGTCAAGGAAACAAAAAGTCGAAAAAGAGGAAAGCGAACTCTCAAAAAACACGCAGAGGTGAGACGGAACCGCGTGCTGGCGCTGTGCAACCGCTGGCTAAGAAAAATCGTGGCCGCAGTATAGAAAGGCGCACACATTCAATGCGTTTAAGATGTAGAGATCTTATTCGCCGTCCGTGCAGATTAACACCTGCAGAATTTTCTGTTAAGCGGAACTCTTCTGCTAAACGTAGCAATTGTGCAAAATCTGCACGTGCACGTTATTTGATCGACAGATCGTTCCCACAGCCAGGAGACGAACATGAAGATCACCCTCTCCTAGttgtgcaaataaaaaataaaaaatatcgccGGGtcgaaaaaacaaaattcaccCTAGATGACTGTCGGCCATTGACGTTTTATGCTAAGAAAAAGAAGACTCAAAAGGCTCCAGCGGCTACACCGGCTTCAGCGGCTCCAGCGCCTCCAGCGACTCCAGCGACTCCAGCGACTCCAGCGCCAGCATTCGAATGTCAGCGTCGTGCTGATATACGCATACCCTCTATACATATAGTGTCAACATATACATGCAAAGAAGAGGACATAATAAAATCAGaACTCAATGACGAAACGGCCGCGGCATATGAGGATGAGATTGGTGATGATGCAATtatagttaataatattgtgaacCCTGCTAATGATGCGACTACTGATTCCAATGATGAAGACTATGCTATCAACCCGGAGCAGGCCAGCCAACATTACTCTTCGCTTTCCATTCAAAATTGGATTAACAGTAGTCATCAGTCAGATGCAGGGCCGTCACAATTTGACCAACCAGGGCCATCTCACCTCTCACAACACGCTTCCTCTGCCGGTCAGAAAACCAGTCGCCCGGCAGCGATTCCTGTTAAACACCTTCGTCCGGCAGTGATTCTTGAAAAAAACCTTCGGCCGGCTAcgaataataaacaaaacacctGCCCGGCCGCCAGTTGGGTCTTTTTAAGACAGGTGGTGGAGGCTCCCCCGCACATATACAACAGAATTTGCCGGAAATGTCACATTTGCATAGTCATTGgcaaaattatagttttaagtcaACTCTTAATAGCGCATCAGGAATTCAAAGGTGAACTCGATCGTGTAAACGAAAAGTTATCAAGGTCACCATCGAGAGCTCAATCTGAATGCGGCTACCTGGACGAGACTGAAACTATAATCATCGACCTCATACCCCCACATGATAGGTTCAAAATGAAGCTTATAACAAAACGTGAAAACGACAGAGCGAACCTAAGTGGCAGTCTTGTTCTGAGGTCAGATGTGACAGTAGATACAGATTTTCCTCTACTGCATCAAAAAGAATATCTGGAGACATTAATACTGAACATCACACTAAGTTTAGGCAAACCTCCACCTTCTGATATAGGGGAAGCTCCACCTTCTGTTGTGAATAAGCCTGTTTCGCGACCAACAACTACTGGCGGCACGTCAAGATATGTCGATGACCAGCCTGGACCGAGTCGAGGCAGACGGGACGAAGTAGTTGACATAATGCAAACAATAGAATATTTCCCAACAGTCGAGGAATTTGCCAATCCACTCGCCTAcatcaaaaaaatatgggtGGAAGCTTCTAGATATGGGATCTGCAAGATCATCCCGCCTGAAGGTTTCGTCCCGCCTTGTAGGGCGGATGACGACCTGCGGTTTGGGGTGACTAACCAATACATCACCCGATTGTATAACCGATGGGGCCCTGCTGCCAGGGAAATGGCATGTATTAAAGAATGTCTCAGGCAGCAGAAAATCAACGCTTCCCGACCACCGCAGATTGAGGGCGTCGAAGTAAACCTGCCTAAGCTATACCGCCTCGTGCAGAGCCATGGCGGATTACAATCCGTTATTAACGATAACCTATGGGGTAGAGTGGCCGAGGACATGAAACTGTGCCGGAGCCCATGCAACGAGCGAAAACTGGACCAGATCTATGTCAAGTTTCTTTTACCGTACGATACAATGTCACAAAAAGAGCATTTAGAACTGCTGATGAAAGTAGAGCGTCAATGGCACAGTCAGCATTCGAAGCTGCTGGCGCGCGCCAAAAACCCACTGCACCGCCAGAATCGAATCCTGAACGGGGCCGTCGGGCCAGCGCCGGACGACGACGACGACCCCGACGAAGAACCCGAAGACGTCGTGAAGCGCGGCGCAAATATGAACCTCGCCAAGttcaaaaagGTGGCCAGAAACGTCTTTGACGTTATTTTCAAGAACCGACACTCATCTTCAGTACACATTGAAGATGAGTTCTGGAACTCTCTCGTGACGGGGTCGGACCACATTTGTGTCAACTCGGCCTCCGTAGACACTGGCGTGGAAGGGCACGGCTTCTCAAAGAACCAGAATGATGAATACTGCAGGCACCCTTGGAAcctgaagATGATTAGTAAGAACCCAATGAACATGCTGCGGTCGCTAGGCCCTGTGCTGGGCGTGACCGTGCCGACGCTGCACCTCGGCATGGTATTTTCTACCAGCTGCTGGCACAAGGACCCGCACTCCATCGCGTGGATGGAGTACCTCCACACAGGCACCTCCAAAATCTGGTATAGCATACCAGCGTCGGAGGAAAAAAAATTCCGCGAGGCGGCAGAAACCCTGATCCCCTCTACTTGCCAGAACAAGGCTCTGTGGCTGCCGTCGGACGTCGCAATGATCCCACCGAGTCTGCTGAGGGACCGGAATGTAAAAGTACACCGTGTGGAGCAAAAGCCGGGGGAGTTTATAGTTATCATGCCCAGGGCGTACTCCTCATCAATCAGCACTGGGTACACTGTCTCCGAGAGCGTGTACTTTGCCACAGACAACTGGTTCGATAGCATAATGAACGTATTTCAGGAAATCCGTAAATCCTGCGAGCCCACCACCTTCTCGATTGAACAGCTTCTGATTGCCATCGCAGAGGACGAATCTGCGCCGGCATCAGTTATGACCAAGATTAAACCGGCGTTACAGCAGATCCTTACACAGGAAATGGAATATCGAAGATTATTGACAATGAGCGGCGTACGCCTAGCGAATACGGACCAGACCGAACGTGCAACGACATCCCGGGGCAAGAATCGCAAGCGCGACATAGAAACGCCCATCCCGCCGCCGACGCCAGTGCCGGGCTCGGTGCCGGGGACGTCCTTTGCGCCGCCGCAACCGCCCGTCTACAACGTTCGGGAACATGACGAGTGTGAAATATGTCGCTGCACACTGTTATTGTCAAAAGTGAAAAACATACCGGAGAAGGACTCTGTAGTGTGCCTGGAGCACGCCGTGAAGCTTCTGCGAGTGATGAATAACGACCCGGAGTGGAGCCCCGTGGAAGTCGAGATGTTCCACATGTACGAATCTGCACGGCTGCAAAAGCTGATTGGGGCACTCGACTGGCAGGCAGAGATGGCGGCTTACGCGGCCGGCGACGACGGCGGCTCCTCCGAAGCATGA
Protein Sequence
MGRNSVLSLDNKLLIYNSIIKPIWTYGIQLWGVASKSNVMCLQRVQNNILRNITNAPWFTRNGEIHETTRRVTAQRKFAQGAFVPPAASAAPASPFTTAAVATPSTSAGPSERRHHPDLGNETNTFRSHMTAPVLLDLISFPSSVIEPQNLEQNNTLSPRPNVSDVATEYNDTINEETQPIVLVERLQKKGQGNKKSKKRKANSQKTRRGETEPRAGAVQPLAKKNRGRSIERRTHSMRLRCRDLIRRPCRLTPAEFSVKRNSSAKRSNCAKSARARYLIDRSFPQPGDEHEDHPLLVVQIKNKKYRRVEKTKFTLDDCRPLTFYAKKKKTQKAPAATPASAAPAPPATPATPATPAPAFECQRRADIRIPSIHIVSTYTCKEEDIIKSELNDETAAAYEDEIGDDAIIVNNIVNPANDATTDSNDEDYAINPEQASQHYSSLSIQNWINSSHQSDAGPSQFDQPGPSHLSQHASSAGQKTSRPAAIPVKHLRPAVILEKNLRPATNNKQNTCPAASWVFLRQVVEAPPHIYNRICRKCHICIVIGKIIVLSQLLIAHQEFKGELDRVNEKLSRSPSRAQSECGYLDETETIIIDLIPPHDRFKMKLITKRENDRANLSGSLVLRSDVTVDTDFPLLHQKEYLETLILNITLSLGKPPPSDIGEAPPSVVNKPVSRPTTTGGTSRYVDDQPGPSRGRRDEVVDIMQTIEYFPTVEEFANPLAYIKKIWVEASRYGICKIIPPEGFVPPCRADDDLRFGVTNQYITRLYNRWGPAAREMACIKECLRQQKINASRPPQIEGVEVNLPKLYRLVQSHGGLQSVINDNLWGRVAEDMKLCRSPCNERKLDQIYVKFLLPYDTMSQKEHLELLMKVERQWHSQHSKLLARAKNPLHRQNRILNGAVGPAPDDDDDPDEEPEDVVKRGANMNLAKFKKVARNVFDVIFKNRHSSSVHIEDEFWNSLVTGSDHICVNSASVDTGVEGHGFSKNQNDEYCRHPWNLKMISKNPMNMLRSLGPVLGVTVPTLHLGMVFSTSCWHKDPHSIAWMEYLHTGTSKIWYSIPASEEKKFREAAETLIPSTCQNKALWLPSDVAMIPPSLLRDRNVKVHRVEQKPGEFIVIMPRAYSSSISTGYTVSESVYFATDNWFDSIMNVFQEIRKSCEPTTFSIEQLLIAIAEDESAPASVMTKIKPALQQILTQEMEYRRLLTMSGVRLANTDQTERATTSRGKNRKRDIETPIPPPTPVPGSVPGTSFAPPQPPVYNVREHDECEICRCTLLLSKVKNIPEKDSVVCLEHAVKLLRVMNNDPEWSPVEVEMFHMYESARLQKLIGALDWQAEMAAYAAGDDGGSSEA*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-