Basic Information

Gene Symbol
Xbp1
Assembly
GCA_905147285.1
Location
LR990136.1:3121768-3123341[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.4 1.1e+04 -2.4 0.1 16 25 32 41 30 42 0.73
2 3 2.3e-16 3.4e-13 50.5 8.1 2 52 46 96 46 98 0.97
3 3 2.7e-06 0.0041 18.2 2.0 27 55 85 113 84 118 0.91

Sequence Information

Coding Sequence
ATGAGTACCCCGATCATCATCACTGTGCCGAACAACTACCTGGCGATGGAGGATATGGAGATGGAGTCCAATGTGTTGCTGGACGTCGCATCGCCGGCTCCCTCCAGGAAACGCCGCCTGGACCATCTATCATGGGAGGAAAAAATGCAAAGAAAGAAGCTGAAGAATCGCGTGGCGGCGCAGACGTCGCGTGACAGGAAGAAGGCGAAAATGGATGAAATGGacttaaaaatcaataatttgATTGAGAGGAACGATCGCTTGACGAGTGAAGTAGAGAGCTTAAAGGCTTTGAACGAGCGTTTGTTGAGTGAGAACGCATCGCTTCGCAGCGAGGCGGCGGCGCGGACCGTCGCGGGAGCCCCCAGACCAGCGGAGTCTGATCCTCAGCAGAAGGAAGGGCCCCCGCCGGCGATCCACGCGGCGCGCCTGTTGCTGGCGATGTGTCTCCTCTCGCAGACCTCCTCGCTCACTTCGACTCAGAAGAGTACCTCGACACCCTCCATCAACTTGCAGACTCCCTCCTCAAAGAAATTGATGCAGGTGCTGCAGGAGAGGCTCAAAATgaGCCAGTCAGGGACACTAGAGAATGCCCTCAAGGAACTAAAGTGGTGGGGACCACAACAGAGCACCTGGAATCCAGTGAAAGTGCAGTCATAA
Protein Sequence
MSTPIIITVPNNYLAMEDMEMESNVLLDVASPAPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMDLKINNLIERNDRLTSEVESLKALNERLLSENASLRSEAAARTVAGAPRPAESDPQQKEGPPPAIHAARLLLAMCLLSQTSSLTSTQKSTSTPSINLQTPSSKKLMQVLQERLKMSQSGTLENALKELKWWGPQQSTWNPVKVQS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
-
80% Identity
-