Hcor013006.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hymenopus coronatus
Gene Symbol
-
Assembly
GCA_030762935.1
Location
CM060882.1:139922826-139990519[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 0.45 1.9e+02 5.4 2.3 1 23 68 91 68 91 0.96
2 21 0.15 63 7.0 2.7 1 23 98 121 98 121 0.96
3 21 0.22 96 6.4 0.0 2 23 192 214 192 214 0.97
4 21 0.018 7.7 9.9 0.8 2 23 248 269 247 269 0.97
5 21 2.2 9.3e+02 3.3 0.9 1 23 275 297 275 298 0.95
6 21 0.3 1.3e+02 6.0 2.9 2 23 678 699 677 699 0.96
7 21 0.057 24 8.3 3.3 2 21 713 732 712 733 0.94
8 21 1.4 6.1e+02 3.9 0.2 2 23 1192 1213 1191 1213 0.94
9 21 0.067 29 8.1 1.7 1 23 1221 1243 1221 1243 0.98
10 21 0.072 31 8.0 2.7 1 23 1286 1308 1286 1308 0.96
11 21 0.015 6.4 10.1 5.3 1 23 1315 1337 1315 1337 0.99
12 21 0.43 1.8e+02 5.5 1.3 1 23 1407 1429 1407 1429 0.98
13 21 0.028 12 9.3 1.1 1 23 1451 1473 1451 1473 0.97
14 21 5.5 2.4e+03 2.0 4.8 1 23 1550 1572 1550 1572 0.95
15 21 0.0055 2.3 11.5 1.2 1 23 1578 1600 1578 1600 0.98
16 21 0.03 13 9.1 1.7 1 23 1671 1693 1671 1693 0.97
17 21 0.0037 1.6 12.0 1.1 1 23 1699 1721 1699 1721 0.97
18 21 0.0067 2.9 11.2 2.6 1 23 1804 1826 1804 1826 0.97
19 21 0.00011 0.048 16.8 2.0 1 23 1832 1854 1832 1854 0.99
20 21 0.00069 0.3 14.3 0.7 1 23 1950 1972 1950 1972 0.98
21 21 0.19 82 6.6 2.5 1 23 1982 2004 1982 2004 0.96

Sequence Information

Coding Sequence
ATGTCGTCACCATCGATGGTTCACCGCAGTGGTGATTCTCTAGTCGTACGCAGCGTAGTCAGCGGTAACGCCCTCTTCGAGGACGGCAAGGAAACCACAGCTAGGAAGAAAGAAGAGGAAACGGGAGAGGGAGAGGAAGTTGAGGACGAagaggaagaagaggaggaggattTGCTGCCGCAGTGCAAGATCAAGCGCAACTACAGCTGTCCGCATTGTTCCTACTACACACAGAATCCACGGTCTTACCTATACCATTTGCGAGACGACCATGGCGAGAAGATAAAGGTGTACGAGTGTCCCAGCTGTTTGTACGCTTCCAAGCATAGCCAGAAGTTGCAGCGGCATGTTCACATGGTGCACGTGATAGGCCGCAGGGGGGGAAGCGGAGCTGATAGCGGCGGCAGGAAGAAGACTGCTGCCAACATGGCTGCATCGTGGACAAATAATGTGGAAGCGACCTCGAAATCTTCCATGTTGCCAAAGAAGAAGCAGCCCAAAGGTGGAGGCGAGGATGTTGCTGTGGCAGGTGAAAGGAACGAGGACGTTGGCGGTAATGGCGAAGGCATTCGCGAATGCTCAGTATGTGCATTCACGAGTTCGAATCCAGCGGAGGTCGCCCGGCACGAGCGCACCGCCCATCTTAAGAAGAAGTTTTACCGGTGCTGTAAGTGTAATTATGTCACACATATGAAGGCCaggtacacaaaacatgtaaagtaTCACTCAATGCCAATGATAAAATGCGACCTCTGCGACTTTCGAACGCCATACAAATGGAACTTGGATAGACATTACAAGAATCACACCGGTGATGGAGCATATCGCTGTGCTTTGTGTAATTTCACGGCAGACATCAAGCAGAGTCTTACGGTCCACGAAATGAATCATCACGTCCCCCCGGTTGGGCAGGGAGCTATCGTGGCTGCAGCCGCCGGGGGCGGAGGAGGCGGCGGTGCTCGAAGGCGGAACAAAGTAGGGGCCAGTGATAGTTTGCAACAAGAAGAAATAGACCAGGAGGAGCTGGAACTGCTGAGAATGGAAAGAGAGGATGCTGCAGAGGGTAGTGAACAAGAGGAAGACAAAAATAGAAAGTGGTGGCAGAGGGTATTGTTCTGGGACCTACCCGGTAAGGAACGTACAGCAATAACTCCTGCAGTCATTTTGATGGCGTCTCGCAGGAAAGTCCGCGATGATCTCGGATCCACTTATTTGCAGatgCCAGGCTTGGATACGTCTTTTCCTGGAGGTAAAGTTAATAATAGCAGAAAAGTCATCAGTAATGGCAGTGCCAACACAGTTATTCCATCAACAGTTCGTCAATGCAAAGTGAAAGTCACAGTAAAAAAGGCTAAACATGTTAGCACTCAGGAACAGAATGAACGTCACAATTTTCAAACTGATTTTATCCATCCTGATGACATCATTCACCAtaagaatggaaatgtatataTAAAGACATTAAGATGTAGAATGTGCAATTATAAAGCAGCGTGGGAAGGAGAAATGGCTCGCCATGAAAGCAAAGCACATGGCATTGGGAGACCAAAGCCTGTAGCTTCACATGCAAAGAAGATACCTCGACCTATACCAAATCTTATACCCATACAAAACAAAGGAGTGAACTCTAATAATTCAAATCTTCCCATTTTGCGCATTCCTTCAATTCGTAATCGTGCCCCAAATTCAGTGTTAAAACCCTCAACTCCTCCAGAAAACAGTCTCAGTGAGCAGGACCTAAATGAAATATGTGCCAAGTCATGTCCCAATAGTTCATTGAAGGATTTTGCATCACTTATAGGCGGGGAAGAAGTATTTAGGACTACTGATGAAGATCTCGATGAGCTTAGAAATACTGACACTACAGGAAAGACTTCTCCAGTTAAGGAAGAAGAAACTGCTGCTTCAGAAGAGACTTCAGTAAAACCTGCTTCACCACCACCAATAGaagtttttaaaaagaaaaatgcctCATTCTTTGATAAGTTGAAAGAAAAACTGCTCGTTGGCGCAGGTGAGAGCTGTAATCTTGTTTGTACATATTGTGGACATGAATCAAAGTGCCTCTCAGAACTGGCTCGCCATCAAAAACTGCATCTTGGAGGTACGAGTAGATCTCTTGCATTATCCTCCACACGGTGCCAGCATTGTCGTCAGCGATGTAAAACTAGTGCAGACCTCATGGTTCATTTAAAGTCATGTTCAGAAGCTAACAAAAGTGTTACATCTACAGATCCACcagaggaagaggaagaagaagacgGAGAGCAGGAGAGCAAGGATGATGTGCAGGAAAGCAACAAATACAAAATTGCATTGGAAGAACCTGaagcagaagaggaagaagagggAGAGCTGAAGGCAAATTTAGAAGAAGAACCTCATCCCATGGAAAAcaaagtttttgtgtggaataatcTCCCTGAAGAACAGGGTTCCCCAGATGAAGATCACAGTAGTGAAGGCAGTCTTGTTGGTGTTGAAACTGCTCCAGGTTATGGGGCTGTAACCAATAAAACACCATCTGACGCTGTAGAGGTGGCTCCTCCAGAAGTGGATCCCAAAGTTGCGCTGACTGTAAAGAAGGTATTCAAATGTCCACATTGCTCATTCTGGGCATCAACAGCATCACGCTTCCATGTCCACATTGTAGGGCACTTAAACAAAAAACCATTTGAGTGTTCATTATGTGCATATCGTTCAAACTGGCGCTGGGACATTACAAAGCATATTAGATTGAAATCTGCACGAGATGCTGGCCATGAAAGAGCAAGAGTTTTAATGACAGATGAAACAGGGCGTCGCAACTACTCAAAGTACAACAAATATTTGACACTAATGCGAGTGCATGAACCATCAGCTGAGAGCAGTGGTAGTGGCCGTCGTACAAAATCATTAGAAGGCAGCATGGCTTCTCAACCTGTTAAGCTGCCTGCCCCTCCACGGCTTACTCGAGCTCCTACTCCTGTTCCAAGCAATACACAACCAGTTGGGCCCCTGCGTCCTCCACCACCATTGCGAGCTGCACATCAAGTTGTGTTCCCAGGACCACCACCTTTACATCCTCAGCCACATGTAGGAAAGAAGAGACTAGCGTCAGGTGAACCAGAGAATCTGCCTCAACCAAAGAAACCAAATAGTGATGGCAAGAAAACATTATGGAAATGCAAGAAATGTAACTATAGAGATGCAAGCAGAGAACTAGTGCTGGCTCATGTGAAGGAGCATTATCAACAACgtcagcaacaacagcagcagcaacagcagctgCAGCAGCAGTTACATCAGCAGGATTcacaggaggagcagcagcagtctTTACCACAGTCTGACGAACTTGATGGTGATGATGAGGCAAGTGTCAATTGGGGACAGGCACCATTCCGGTGTGGCCACTGTCTCCAGGTATCGAATTGGAAGCATGTAATACAGCGTCACTGCAGACTTAAACACAGTGGAGATGTAAGAGTTGTAATTGGCCTTAAGGATGGAGGAACAGTGGAGGAAAATTTTACTATGGATGATTCAGAGCATATGCAGGGAGATGATCAAGCAGAGCAGAATACAGCTATAGTATGCGACAAGTGTCCTTACTCAACAGATTCTATGACAGAAATGTCTGCACATAGCAAGCAGCATCTTTCTCGTCCTGGTGCCATTTTCAAGTGCTACTTCTGTCCATTCTATGTGTCACTTAAAAGaGATCTACTCCAACATATGAGGCTACATGGTGTCAATGAACCAGAAGATTACATATCAAAAGCTTTGAATGCTACAAAATCACCAGCCAAAGCAGATAAATCTGAAGAGGGTGGACGACAACACCACAACATTGAAACAAGTCCACACAAACGGTACAAGTGTTTTGGCTGTCCATATGTTAGCAACAGCAAGAGTCAGTTCCTATACCACAAGCAGTTTCATCGTCCACGTACATCACAATTCAAATGTAGTCTCTGCTCTTATAATGTAAGCAGGAGACATCTTCTACATCAGCATTTACGTGTACACGGCATCCTAGTACCCCCTCAAAAAAGTCCTTCCAAATCTGGTATGGGTACCGATGATGGTGATGGCACTGATATAGAGGAAATAACGGAGCTTCCTTCCCTTGCAGCACCATCTTTCTCACAAAACACTTTCCCAGTGCTTGATACACGTCAATTATCTGATATTCCTTTAGTTTGGGTTTCCCGATCTGGCAACTTCTGCAAGATGTTCAAGTGCCGTTACTGCCCACATGTTAATGCTCGCAAGGCTAACATACAGGaacatgaaaaaatgcatcgtgcACGAGATACTGACCACTCATCTGGTGATGGACATAAGGAAGGCACTCAGCAACAACAGTTTCATTGTCCAGATTGCAATTACATATGTAACAATGCAGGGGTTCTTTCTTCACACGCCAAAGTGCATCAGGGGTTATATGGTCAGGTGCACTGCCTTGTGGACACTAGTCGCAGTGATGAAGTTCAGTTGCGAGAACTGCATGCAAGCATAAACCGAGAAGATGATGGAATAGAAATTCGTGAAGCAGAAGAAGAGACAATGGACTTCCAGTTAGAAAGTCCAGCAGAATCTAGTCCAACAAGAGGTACCACTGAAGAAAGTGAAGCTAAGAACATGGAAGACAAGAAAGTTCTTCACTTTTGCAAACATTGCCCTGCAAGGTTTCTTTTTGAGAAAGAGCTGAATATCCATACTCGTTTCCATGAAATTCGACTAGCTTTTAGATGTGATAGTTGCTCCTACACAGCAAGACAAAGGCCACATCTTCTTGCTCATCTCCGAGTGCATACTGATGAATATCAACAGCGGACCAACAGCCTTGTTGATGCTTATTCTGTATCTTCAGCACATCCACGACCAAAAACTGCTATTGTAATTGAAGGTCCTGGAGTTATAGGATCCGTGTGGGTTGTTATTGGTAAGAGTCCTGATGCAAATAAATCATCTGTAAGTGCAGAGGTGACATCAACATCTACTAGTCGATCTGTTGTGAAGCAGTATTCTTGTCATCTTTGCCCAGCAAAGTTTTTCAAAAGCATGGCATTGCAGTACCATATCACCCTTCATGGTGGTTCAGGTCCACATAAATGTCGACAGTGTGACTATGCTGTAAAAACATATGGTAATCTTGTAAAGCATGAAATGATACACAAAAGCACTGCTCCAGAAAGGAAGTCAAAATCTAGTAATGGCGTGAACTTAAATACAATCCCTCTTTCTGGAACAGAACTTTTCCAACACCGAACAGAAGCACAGAAACAAAGTATAGCAGAAAAGAAAAGTCCTCCTGAACCTTTGCCATTGCATGTTGATCCTCAATTTGGCATTTTAATGCATGGCAATCCAGATTTCATTTATCCTACATACTTCAAGAATGGCCGTTTGAAAGAAAAACGTTACAAATGTCACAAATGCCCCTCAGCCTTCGAGAAGCGCGAACAGTATAAAGTGCATCTTTCACTGCATGGCTCAAGGCAACGTTACAGATGTGAAAAGTGTGACTATTCAGTGAAATACTATGCAAACTATATACAGCATATGAGAAAGCATAAGAATAATGAGGAAGCCCAGGAAGCAAGGAAGCTGGAGAGAGGAGACAAGGATGAAACTCATGAAACCAAAGAGGATGATGAAGGTGCAGAGGATTCAAGTGTAATAGATGATGAACCAATTATACCAACTACAAGAACTGTAAAGACAATTGGCAGTACCCATCATGGACCTTTACAACTGTCTACTGCTGATCAGCAGACATTAATTCTAATGCAAAAACGGCAAGAAAATGCTAATTCTAGTGGATTGCAGGATGGTACTAGTTCAGAGGAACGCCGGTCATTCCGCTGTCCACATTGTCCATATACAAGCCCCCGACGTGATGGGGTCGAATCACATATCAAAAGGCACCAGATTGTTTCAGGAGTTTGTGGTGCATTTGTTTGTGCCCACTGTGACTACACTGTCccacaattacattttttgcgtgaaCATAATAAATTACACTTTAATCGCTCTAAAAAACTTCAGCCTGACATTTACATGAAGTTTGATCGTCTTGAATTGTGGGTGACAGACGAGGGTAAAGAAAACCTTACAACTAATGTATCTTTGGAATCCAATGAAGGAAAACGCTTGCTTTTCAAGGATAGTGGTACAGAGATAGACTGTGATGAACGATTTATTCCACCACTTTTACCAGTGGAAGAGATAACAGAGgaagaaaaaatatttgtagaTCCACGTACAGgtgagaaaattaataatattaaacccGAACTTTCACATTTTGAGGTCGGAGGCAACATTAAGCAGTTACCTGAGGAGAACATCGATGATAAGGTATGTGTAGCAGATAATATTCTAGCAGCAGCAGAAGATACCAAATCTGAATCAGAAAGTACTAGCAGTAGTACTTCAAGCTCAAGCAGCAGTAGTTCAAGTAGTAGTtccagcagtagtagcagtaacagcagtggTACCAACTCTAGCAGTAACTCTAGCTCAAGTAGTGGTAGTTCCACTACAAGTACAAGTGGAGAAAGTGACTCTGAAAGTGAAGGAGCTCCAGCAGTGGTTGATGACGCATCATCAACGTGTTCAATGAATTAA
Protein Sequence
MSSPSMVHRSGDSLVVRSVVSGNALFEDGKETTARKKEEETGEGEEVEDEEEEEEEDLLPQCKIKRNYSCPHCSYYTQNPRSYLYHLRDDHGEKIKVYECPSCLYASKHSQKLQRHVHMVHVIGRRGGSGADSGGRKKTAANMAASWTNNVEATSKSSMLPKKKQPKGGGEDVAVAGERNEDVGGNGEGIRECSVCAFTSSNPAEVARHERTAHLKKKFYRCCKCNYVTHMKARYTKHVKYHSMPMIKCDLCDFRTPYKWNLDRHYKNHTGDGAYRCALCNFTADIKQSLTVHEMNHHVPPVGQGAIVAAAAGGGGGGGARRRNKVGASDSLQQEEIDQEELELLRMEREDAAEGSEQEEDKNRKWWQRVLFWDLPGKERTAITPAVILMASRRKVRDDLGSTYLQMPGLDTSFPGGKVNNSRKVISNGSANTVIPSTVRQCKVKVTVKKAKHVSTQEQNERHNFQTDFIHPDDIIHHKNGNVYIKTLRCRMCNYKAAWEGEMARHESKAHGIGRPKPVASHAKKIPRPIPNLIPIQNKGVNSNNSNLPILRIPSIRNRAPNSVLKPSTPPENSLSEQDLNEICAKSCPNSSLKDFASLIGGEEVFRTTDEDLDELRNTDTTGKTSPVKEEETAASEETSVKPASPPPIEVFKKKNASFFDKLKEKLLVGAGESCNLVCTYCGHESKCLSELARHQKLHLGGTSRSLALSSTRCQHCRQRCKTSADLMVHLKSCSEANKSVTSTDPPEEEEEEDGEQESKDDVQESNKYKIALEEPEAEEEEEGELKANLEEEPHPMENKVFVWNNLPEEQGSPDEDHSSEGSLVGVETAPGYGAVTNKTPSDAVEVAPPEVDPKVALTVKKVFKCPHCSFWASTASRFHVHIVGHLNKKPFECSLCAYRSNWRWDITKHIRLKSARDAGHERARVLMTDETGRRNYSKYNKYLTLMRVHEPSAESSGSGRRTKSLEGSMASQPVKLPAPPRLTRAPTPVPSNTQPVGPLRPPPPLRAAHQVVFPGPPPLHPQPHVGKKRLASGEPENLPQPKKPNSDGKKTLWKCKKCNYRDASRELVLAHVKEHYQQRQQQQQQQQQLQQQLHQQDSQEEQQQSLPQSDELDGDDEASVNWGQAPFRCGHCLQVSNWKHVIQRHCRLKHSGDVRVVIGLKDGGTVEENFTMDDSEHMQGDDQAEQNTAIVCDKCPYSTDSMTEMSAHSKQHLSRPGAIFKCYFCPFYVSLKRDLLQHMRLHGVNEPEDYISKALNATKSPAKADKSEEGGRQHHNIETSPHKRYKCFGCPYVSNSKSQFLYHKQFHRPRTSQFKCSLCSYNVSRRHLLHQHLRVHGILVPPQKSPSKSGMGTDDGDGTDIEEITELPSLAAPSFSQNTFPVLDTRQLSDIPLVWVSRSGNFCKMFKCRYCPHVNARKANIQEHEKMHRARDTDHSSGDGHKEGTQQQQFHCPDCNYICNNAGVLSSHAKVHQGLYGQVHCLVDTSRSDEVQLRELHASINREDDGIEIREAEEETMDFQLESPAESSPTRGTTEESEAKNMEDKKVLHFCKHCPARFLFEKELNIHTRFHEIRLAFRCDSCSYTARQRPHLLAHLRVHTDEYQQRTNSLVDAYSVSSAHPRPKTAIVIEGPGVIGSVWVVIGKSPDANKSSVSAEVTSTSTSRSVVKQYSCHLCPAKFFKSMALQYHITLHGGSGPHKCRQCDYAVKTYGNLVKHEMIHKSTAPERKSKSSNGVNLNTIPLSGTELFQHRTEAQKQSIAEKKSPPEPLPLHVDPQFGILMHGNPDFIYPTYFKNGRLKEKRYKCHKCPSAFEKREQYKVHLSLHGSRQRYRCEKCDYSVKYYANYIQHMRKHKNNEEAQEARKLERGDKDETHETKEDDEGAEDSSVIDDEPIIPTTRTVKTIGSTHHGPLQLSTADQQTLILMQKRQENANSSGLQDGTSSEERRSFRCPHCPYTSPRRDGVESHIKRHQIVSGVCGAFVCAHCDYTVPQLHFLREHNKLHFNRSKKLQPDIYMKFDRLELWVTDEGKENLTTNVSLESNEGKRLLFKDSGTEIDCDERFIPPLLPVEEITEEEKIFVDPRTGEKINNIKPELSHFEVGGNIKQLPEENIDDKVCVADNILAAAEDTKSESESTSSSTSSSSSSSSSSSSSSSSSNSSGTNSSSNSSSSSGSSTTSTSGESDSESEGAPAVVDDASSTCSMN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-