Basic Information

Insect: Hymenopus coronatus
Gene Symbol: ush
Assembly: GCA_030762935.1
Location: CM060896.1:145733777-145776564[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.014 6 10.2 0.1 1 20 191 210 191 212 0.94

2 9 7.3e-05 0.031 17.4 1.3 1 23 279 301 279 301 0.98

3 9 0.027 12 9.3 1.0 2 21 336 355 336 356 0.92

4 9 0.26 1.1e+02 6.2 4.6 2 21 780 799 779 800 0.94

5 9 0.0032 1.4 12.2 0.1 1 20 864 883 864 885 0.93

6 9 0.54 2.3e+02 5.2 0.1 2 23 952 973 951 973 0.96

7 9 0.015 6.6 10.1 1.4 1 23 979 1001 979 1001 0.99

8 9 0.015 6.5 10.1 1.8 1 23 1060 1083 1060 1083 0.94

9 9 0.048 21 8.5 0.8 2 21 1228 1247 1227 1248 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.014	6	10.2	0.1	1	20	191	210	191	212	0.94
2	9	7.3e-05	0.031	17.4	1.3	1	23	279	301	279	301	0.98
3	9	0.027	12	9.3	1.0	2	21	336	355	336	356	0.92
4	9	0.26	1.1e+02	6.2	4.6	2	21	780	799	779	800	0.94
5	9	0.0032	1.4	12.2	0.1	1	20	864	883	864	885	0.93
6	9	0.54	2.3e+02	5.2	0.1	2	23	952	973	951	973	0.96
7	9	0.015	6.6	10.1	1.4	1	23	979	1001	979	1001	0.99
8	9	0.015	6.5	10.1	1.8	1	23	1060	1083	1060	1083	0.94
9	9	0.048	21	8.5	0.8	2	21	1228	1247	1227	1248	0.93

Sequence Information

Coding Sequence: ATGACGAGGGCCGTCGAATGGCTGACTATACACTGTCTGAGTTCAGATGGTGAAAACCAGCCAGCCTTGCGCCGTGAAGACGAAGAAGAGTGGGGAAGCGAGGCCGAGGGAGATGCGGGGGCGCCACCAGCAACCTCGCCTGCCGCCTCCAGTGCTGATACCCCCGCCCCCGCTGCAGCTAGTCCAGAAGAACCGAGCTCTGAGGTCCTGCCACCTCCAGCAATCAAGTCATCGCCTCCAGCGTCACCAGTGCAAGGCGCTAGCGAAGGATCGCCTCCCCCACCGCCGCCCCCGAGACTGAGACTGAAGGCGGGGTTAGCGACGGATCCAGCTCTTCGTGCTGCTCCTAGTCCAGTCCTGGCGCCGGCAGCTCCTGCCCCCGCGGTACCTGTACCACCCACCGCTCCTGCTACAGCACCCGGGCTGGAATATCTGGCGTCACTCAATCCAGCCTTCCACACAGCTCTTCCAACAAGTCAGTTCTTCTGTTTACCGCCAGAAGGCGCTGGGACTGTTCCTCAGTCGAGGCTCAAACCCGACTCTTTGGAATCCACACGCCAAGTGCCCGTATATATGTGCAATCCCTGTGGGATACGATACAGCTCACTCAGCACTCTGGAGGCTCACCAGACTTATTATTGTTCTCATCGTACTAGTGGTGCTGGTGCCCCAAATGCTACAAACAATGCAACTGCTGCCGTCGCTGCTACCACCAAAACAGCATCACAAAAAGGTCGTGGTGACAGTGACAGTGAGGATGGCAAGCTGACAACAGGGGGTGAAGAAGGGGATAGTGATGTGGGTGGTGCCAAATCTCAGCGAACAGGAAAGCAATATGCCTGCCCCCACTGCTCCTACAGTGCAGACAAGAAGGTCAGTCTCAATAGGCACATGAGGATGCACTCCACATCTCCACCAGTGCCAACCACAACTGTCAATGGCGCCACTGTAGCCCCTCCCATCCAGACATCCACTTCTGGAGATGCGCTTCACCTAGTCGATCGCTACTGTCAAGACTGTGACATTCGGTTTTCCTCGGTGAAGACGTTTCGAGCGCACAAGATGCACTACTGCAGCACCAGGCATGTGGTGAAGCCACCGTCAGTCAACAAGCCTCCTGGAGGCAGCGGCGAGTCTGTTGCAGGGTCTCCACCCCCAGCTTCCACTTCCCCAAGTACGCCCCCACCACCTCCAAGGCGAGGTACTCCTCCAGCACCCTTCCTCGCTCTACCTACCAACCCCATCCTCCTTGTTCCTTATGCTCTGTTTCAAGGTGCCAGTTTACTGACAGGATCTGCAGCAATGGGACTCCCTGCACCAGATACTGCCTGTCTGTTGCTGCCAAATGGGACTATACAGCCGATGGCACAGGCAGTACATGCTCCTGTACCTCCACCACCTCCGCCACAGCCACCCAAGGAGGACCTGAGGACATCTGGTGACCAGGCTCGTTCATCTGAACAGGTGAAAATGTCAACCTCATCCAGAACAACGCCATCTGCTGCATCATCATCGTcctcttcatcttcatcttcttcaaGAGCTCCACAGACCTCAAGAGAGGACACGGGTTCTGGCGCAGCACCATTAGATTTAAGTGTGAGACGTTCCAGTGGCAGTGAATTGGTGGTAGACTTAGACAATGAGCACGATAATGTGGATGTAGGCGAAGACATAGTTTGTGCGCCATCAATACCAGCCATGTTAATGTCTGCTTCTCCAAGTCCATCTCCTCCAGCATCACCAGCTTCCTCTTCCAACCGACGAGGTACAGGTTCATCACCCCCTTCCAAGAGACTGCGTACAGAATCTTCAGGAGGTAGTAACAGCCCCAGTCCGAAGGCATCATCACCACGTTCTCCACGTAGACTCTCCACCCCAAACGGCATTATCACCAACACCAACCAGCAGCAGCGCAAGGTTCTGGCTGCAGCATTAAGCCAAACACTTCAGGGGCAGGACAGTAACCTTTCTAGTTTACTCCTCGCAGCTGTAGCTGCCACTCAAGGGGATGGAAATGGTGCACCACTCCTCAAATCCCCTCCGGTACCACTTCCATACCCTTCTCCAATACCAGCAGTGGGGAAGCAGGTATTGCCCAACAAGTCTCAGTCTGCCAAAGCTTCTCCTATTGCTCCCCTCATACCTCCCTCACTGTTGTTGCCAAGCCCTAGAGGGACTGCAGCAAACCCTGAGCATCTATTGTCTCCAGCAGCGTTGCTGCCACTGTTAACATCTGAGATGGCGCTGAGGATGGCTACTGAAGCAGCAGCAGTGGCAgcagcaccacctccaccaccaccgccacctcaAGTTCTAGTGAAACAAGGTGTATCAAAGTGCAGGGAGTGCAACATTGTATTCTGCAAACATGAGAACTATATGGCACATAAGAAACACTATTGTTCAGCTCGACTGGAAGGGACAGTTGTAGAGGATTCAGGGACGGGCATGACTAGTCCAGGACACGCTGTCCCTAGTTCTCCTAGCACTTCCAACTGTGGGTCACCTCCCAACAGTATCCCAGGGTCGAAAGAAAGGGCCAGTCCAACCTCTCCTGGTGTGCAAAAACAACCTACGTTGTTGCAGTTTATTTGTGCTGCATGTGGTATCAAGTTTACATCGTTTGACAATTTGACTGCACATCAAGCTTATTATTGTCCAAAACGTGCTGAAGTAATAGCCAAAGCAGACTTGGACAAACCTGGAGTAGTTGCATCTCGCAAATGTATCAAATGCAAGGAGAAAGAATTTGATGATTTGATGATTTCTATTGTGCAGTTGACTTTAGATCCACTGGTACCCCACCAGTGTACAGCTGGTGTCAGTAGTGGTGGAAGTTCTGGAGGTTGGAAATGCCCATGCTGTGATGTAGTCAGTCCTACAGCAAATGCTGCAcaaaggcacatggacacacatagtGGCATAAAGGCATTCCGATGTACCATCTGCCGCTACAAAGGCAACACCTTGCGGGGCATGAGAACACACATTCGCATGCACTTTGAGAAAAAGTCTGCAGACCTTCAGGAGGAGAACTTTATCTCTTGCATCATCAATGAGGAGGCAACTGTGAATCCCCCACAGCCAATGTCGCTGCCACCAGATACTGGTCCTATACCAATGGAAATACAGCCACTCGCTGAAGGTGGCGATGGTGGACGAGTAGAGAAGTTGCACTTTTGTGAACTGTGCAACTAtagctctacttacaaggggaaCGTTGTGAGGCATCAGAAACTAGTGCATGGGAAGTCCGAGGAAGGCTCGTCTTCACCCATGAGCATGGCGGTCAGCCCTCAGGACAGCCGAGGTGAGAGGGAAGGCACCCCAGAAACAGCCATCAAGCAGGAAAGTGCTATCAAACAGGAAGCTCCAGAACAGGTTCCAGTAAAAGAAGAAAGATCTTCACAGGCATTTCATGAGGATGAAGAAGAATATGTGGAAGTGGAAGAAGACCCTCAGACAACAACTACTATCAAGGATGAGCCAGTAATGGTAACAGCTGAAGGTGAGGACATTGCAGTAGGCGACAGTCATTTAGAAGGCTCACGAACCCAGGACTCTGACGTAGGCGGTCAGTTTTACAGGAGTGAGCACGGTGCAGCAGATGAAGGCACGGGGCAAGACCTGCCGGCAGGTGCAGCCAATAATAATGGTGCAAAGAAGTCTGGTTCCAAATACTGTAAGTCATGCGACATATCGTTCAACTATCTGTCAACATTTATAGCACACAAGAAGTTCTACTGCTCAAGCCATATGGGGGAAGGCAATGGGCGGACAGCTGAAACTTCTGTGCTGTAG
Protein Sequence: MTRAVEWLTIHCLSSDGENQPALRREDEEEWGSEAEGDAGAPPATSPAASSADTPAPAAASPEEPSSEVLPPPAIKSSPPASPVQGASEGSPPPPPPPRLRLKAGLATDPALRAAPSPVLAPAAPAPAVPVPPTAPATAPGLEYLASLNPAFHTALPTSQFFCLPPEGAGTVPQSRLKPDSLESTRQVPVYMCNPCGIRYSSLSTLEAHQTYYCSHRTSGAGAPNATNNATAAVAATTKTASQKGRGDSDSEDGKLTTGGEEGDSDVGGAKSQRTGKQYACPHCSYSADKKVSLNRHMRMHSTSPPVPTTTVNGATVAPPIQTSTSGDALHLVDRYCQDCDIRFSSVKTFRAHKMHYCSTRHVVKPPSVNKPPGGSGESVAGSPPPASTSPSTPPPPPRRGTPPAPFLALPTNPILLVPYALFQGASLLTGSAAMGLPAPDTACLLLPNGTIQPMAQAVHAPVPPPPPPQPPKEDLRTSGDQARSSEQVKMSTSSRTTPSAASSSSSSSSSSSRAPQTSREDTGSGAAPLDLSVRRSSGSELVVDLDNEHDNVDVGEDIVCAPSIPAMLMSASPSPSPPASPASSSNRRGTGSSPPSKRLRTESSGGSNSPSPKASSPRSPRRLSTPNGIITNTNQQQRKVLAAALSQTLQGQDSNLSSLLLAAVAATQGDGNGAPLLKSPPVPLPYPSPIPAVGKQVLPNKSQSAKASPIAPLIPPSLLLPSPRGTAANPEHLLSPAALLPLLTSEMALRMATEAAAVAAAPPPPPPPPQVLVKQGVSKCRECNIVFCKHENYMAHKKHYCSARLEGTVVEDSGTGMTSPGHAVPSSPSTSNCGSPPNSIPGSKERASPTSPGVQKQPTLLQFICAACGIKFTSFDNLTAHQAYYCPKRAEVIAKADLDKPGVVASRKCIKCKEKEFDDLMISIVQLTLDPLVPHQCTAGVSSGGSSGGWKCPCCDVVSPTANAAQRHMDTHSGIKAFRCTICRYKGNTLRGMRTHIRMHFEKKSADLQEENFISCIINEEATVNPPQPMSLPPDTGPIPMEIQPLAEGGDGGRVEKLHFCELCNYSSTYKGNVVRHQKLVHGKSEEGSSSPMSMAVSPQDSRGEREGTPETAIKQESAIKQEAPEQVPVKEERSSQAFHEDEEEYVEVEEDPQTTTTIKDEPVMVTAEGEDIAVGDSHLEGSRTQDSDVGGQFYRSEHGAADEGTGQDLPAGAANNNGAKKSGSKYCKSCDISFNYLSTFIAHKKFYCSSHMGEGNGRTAETSVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01411045; iTF_00435124; iTF_00955896;
90% Identity: iTF_01411045;
80% Identity: -