Basic Information

Insect: Hymenopus coronatus
Gene Symbol: TIGD6
Assembly: GCA_030762935.1
Location: CM060883.1:4548419-4567985[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.077 33 7.8 0.7 1 23 453 476 453 476 0.93

2 9 0.0084 3.6 10.9 2.1 3 23 484 505 483 505 0.90

3 9 8.5e-07 0.00036 23.5 1.5 2 23 512 533 511 533 0.98

4 9 1.8e-06 0.00078 22.4 4.3 1 23 539 561 539 561 0.99

5 9 0.00021 0.088 16.0 1.7 1 23 567 589 567 589 0.98

6 9 0.00017 0.074 16.2 0.9 1 23 595 617 595 617 0.98

7 9 1.7e-06 0.00073 22.5 0.5 1 23 623 645 623 645 0.96

8 9 3.4e-05 0.014 18.4 2.6 1 23 651 673 651 673 0.97

9 9 0.00034 0.15 15.3 3.1 1 23 679 701 679 701 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.077	33	7.8	0.7	1	23	453	476	453	476	0.93
2	9	0.0084	3.6	10.9	2.1	3	23	484	505	483	505	0.90
3	9	8.5e-07	0.00036	23.5	1.5	2	23	512	533	511	533	0.98
4	9	1.8e-06	0.00078	22.4	4.3	1	23	539	561	539	561	0.99
5	9	0.00021	0.088	16.0	1.7	1	23	567	589	567	589	0.98
6	9	0.00017	0.074	16.2	0.9	1	23	595	617	595	617	0.98
7	9	1.7e-06	0.00073	22.5	0.5	1	23	623	645	623	645	0.96
8	9	3.4e-05	0.014	18.4	2.6	1	23	651	673	651	673	0.97
9	9	0.00034	0.15	15.3	3.1	1	23	679	701	679	701	0.97

Sequence Information

Coding Sequence: ATGCCAAGAACGTGGAAAAGAACCACAAATCGTGGAAGCTGGTCCGAAGAAACCCTTAAAAATGCTATGAAATTTATTAATGAAGGTAATTCCATTAATGCAGCCAGCAAAAAGTTCTCTATCCCATTTAGTACTCTGCAAGAACGGAGGAAAAAGAATAAGACAACTCAACCACAGCTGGGACGCGGTTGCACGTTTACTAAAGAACAAGAAGCAGCACTTGCCCACAGAATAACACTGTTATCAAACATTTTTTACGGACTGTCTGCACAGGAAGTGCGAAGAATAGCCTTCGAGTTTGCTCATGAAAACAACATAGAGcataggttttctcaaaatgtgcaCATGGCAGGAAAGGATTGGTTTAACGGATTTTTAAAACGAAACCCCACCATAAGTATTAGAAAGCCTGACGCCACAAGCATCaacagaatttttggattcaaCCGAGATGATGTCAAGAAGTATTTTGAGAACTTGGAAGCAgtgttttctcaaacagaatatACACCAGATCGCATCTACAATGCAGATGAAACTGGTATTACAACGGTACAAGAGTCCGGAGCAATAGTCGTCACTAAAAAAGAGGCAGGCTCGGTGACCAGCTGGGAGAGGGGAAAGCTAGTAACTGTGGTGTGTGCTATGAGTGCAGCAGGACATTTTATTCCTCCAATGTTTATTTATCCCCGAAAAAGAATGAGTCCCTTGTTGAAAAAAGATGGCCCACCTTGTGCTATATATGAATGCTCACCAAAAGGTTGGACTAACGAAGAGCTGTTTGTCACTTGGTTGAAGCACTTTATCGACCACTCAAAAGCAAGTCTTACCAATCCTGTACTGTTGATATTGGACAACCACAACAGCCACACAACGTTGCAATCTTATATATTATGCAAAACTAATGGAGTGACTATGATTTCCTTACCACCCCACTATTCACACAGATTACAGCCTTTGGACGTAAGCTTCTATTCCACGTTGAAAGACGATTTTAAAAAGCAATGTGATATATACATGAAGATGCATAGGCTTGAAAAGATCACTCCGTATGATTTGGCTGGTCTGTTTAATCAAGCATATTCAAGAGTAGCAACAGTTGCAGTGGCTGCATCAGGCTTCAGACACACAGGAATACATCCATTCAATCGAAATATCTTAACTGACGATAAATTCTCTGCTACTGACAGAGTAGGTCTTCAAAATGAATCTATTCCAGTTATTCAGAATAATGACGCAGGAGTTGAACACTGCATTACGTCCAATGAGCAAAATCAAGAACCTGGAGGaccaaaagaacctcaagattcCAATAACTCATCGCTGTTCCAAGGAATACTTCCCGCAGAACTGCAGTACAGTTGCTCTACGTGCCGCCGAGGTTTTCACCTAAGGGCTGACTTGCTGATACACACAATCCTGGAGCATGCCGTGGATAACCGGCTGCTGTGCCCCATCTGCAGCAAGTCGTGCTTCTCAAACAGAGGAAGCCTGTTCCGTCACATCCGGGACCACACCGCAGAGCGCTCTGTCCAGTGCAGCATCTGCAGCAAGGTCTTCAAGCGCAAGGAAACGTACATGTTACACATGAGAACCCACACAGGTGAGCTGCCCTTCCAGTGCGACACTTGTGGCAAGTGTTTCTACCACAAAGGCCTCCTGATACAGCACTTGAGGATACACAACGGAGAACACAGTTTCAAGTGTGCCACATGTGGCAAGACCTTCGTCTGCAAGGGAGAACTCAGTAAGCATGCTCGCATCCATTCTGGCATACGGCCTCACAAATGCGATATCTGTGGCAAGGGATTCCTCCGCAAGGAAATGCTGGCCGATCATACCCGTTTGCACACAGGTGTTCGTCCGTTTGTATGTCCCATATGTGGGAAGTGCTTCCCTGGGAAGGGGTATCTGCAGAAACACAGTCTGGTGCATACCGGGGAGAGGCGCCATATGTGTTCGGTGTGCAGCGCACGGTTTGCACGTAAAGGCCATCTGATGAGGCACATGTCGGTCCATTCTGGAGAACGGCCTTTCCGTTGTGACCTTTGTGACAAGGCCTTTCAACACAAGCACCAGGTGGCGAGGCATTTGGTGATGCATGATGAAAACGCGTTTCAGTGTTCAGTCTACGATCATGTTGTGAAGCTTCCTGCCGTAGAGGAGGAAGCAGCAGTTACTAGCGCTCCAGTCTTGCCTGGACTCCGCAGCTAG
Protein Sequence: MPRTWKRTTNRGSWSEETLKNAMKFINEGNSINAASKKFSIPFSTLQERRKKNKTTQPQLGRGCTFTKEQEAALAHRITLLSNIFYGLSAQEVRRIAFEFAHENNIEHRFSQNVHMAGKDWFNGFLKRNPTISIRKPDATSINRIFGFNRDDVKKYFENLEAVFSQTEYTPDRIYNADETGITTVQESGAIVVTKKEAGSVTSWERGKLVTVVCAMSAAGHFIPPMFIYPRKRMSPLLKKDGPPCAIYECSPKGWTNEELFVTWLKHFIDHSKASLTNPVLLILDNHNSHTTLQSYILCKTNGVTMISLPPHYSHRLQPLDVSFYSTLKDDFKKQCDIYMKMHRLEKITPYDLAGLFNQAYSRVATVAVAASGFRHTGIHPFNRNILTDDKFSATDRVGLQNESIPVIQNNDAGVEHCITSNEQNQEPGGPKEPQDSNNSSLFQGILPAELQYSCSTCRRGFHLRADLLIHTILEHAVDNRLLCPICSKSCFSNRGSLFRHIRDHTAERSVQCSICSKVFKRKETYMLHMRTHTGELPFQCDTCGKCFYHKGLLIQHLRIHNGEHSFKCATCGKTFVCKGELSKHARIHSGIRPHKCDICGKGFLRKEMLADHTRLHTGVRPFVCPICGKCFPGKGYLQKHSLVHTGERRHMCSVCSARFARKGHLMRHMSVHSGERPFRCDLCDKAFQHKHQVARHLVMHDENAFQCSVYDHVVKLPAVEEEAAVTSAPVLPGLRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00820887;
90% Identity: iTF_00820887;
80% Identity: iTF_00820887;