Basic Information

Insect: Hymenopus coronatus
Gene Symbol: Prdm15
Assembly: GCA_030762935.1
Location: CM060893.1:1780376-1832752[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 7.3 3.1e+03 1.6 0.3 2 23 542 563 541 563 0.91

2 19 0.011 4.7 10.5 2.6 2 23 577 599 576 599 0.91

3 19 8.4e-05 0.036 17.2 3.3 1 23 808 830 808 830 0.98

4 19 0.54 2.3e+02 5.2 0.5 1 19 834 852 834 854 0.95

5 19 3.8e-06 0.0016 21.4 2.0 2 23 869 890 869 890 0.97

6 19 0.033 14 9.0 1.2 2 22 895 915 894 915 0.94

7 19 0.00014 0.059 16.5 2.3 1 23 923 945 923 945 0.97

8 19 8.2 3.5e+03 1.5 0.1 1 11 949 959 949 969 0.72

9 19 0.17 71 6.8 1.1 2 23 984 1005 984 1005 0.95

10 19 0.054 23 8.3 2.0 1 19 1009 1027 1009 1030 0.86

11 19 0.025 10 9.4 0.5 3 23 1036 1056 1034 1056 0.91

12 19 1.2 5.2e+02 4.1 6.0 1 20 1061 1080 1061 1082 0.93

13 19 0.008 3.4 10.9 0.4 2 23 1113 1134 1112 1134 0.96

14 19 0.0043 1.8 11.8 2.8 1 23 1139 1161 1139 1161 0.97

15 19 0.0013 0.56 13.4 1.8 2 21 1167 1186 1166 1188 0.94

16 19 1.5e-05 0.0065 19.5 0.1 1 23 1194 1216 1194 1216 0.96

17 19 2e-05 0.0087 19.1 2.3 2 23 1225 1246 1224 1246 0.96

18 19 0.00011 0.049 16.8 2.6 1 23 1252 1275 1252 1275 0.97

19 19 0.0032 1.4 12.2 3.0 1 23 1280 1303 1280 1303 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	7.3	3.1e+03	1.6	0.3	2	23	542	563	541	563	0.91
2	19	0.011	4.7	10.5	2.6	2	23	577	599	576	599	0.91
3	19	8.4e-05	0.036	17.2	3.3	1	23	808	830	808	830	0.98
4	19	0.54	2.3e+02	5.2	0.5	1	19	834	852	834	854	0.95
5	19	3.8e-06	0.0016	21.4	2.0	2	23	869	890	869	890	0.97
6	19	0.033	14	9.0	1.2	2	22	895	915	894	915	0.94
7	19	0.00014	0.059	16.5	2.3	1	23	923	945	923	945	0.97
8	19	8.2	3.5e+03	1.5	0.1	1	11	949	959	949	969	0.72
9	19	0.17	71	6.8	1.1	2	23	984	1005	984	1005	0.95
10	19	0.054	23	8.3	2.0	1	19	1009	1027	1009	1030	0.86
11	19	0.025	10	9.4	0.5	3	23	1036	1056	1034	1056	0.91
12	19	1.2	5.2e+02	4.1	6.0	1	20	1061	1080	1061	1082	0.93
13	19	0.008	3.4	10.9	0.4	2	23	1113	1134	1112	1134	0.96
14	19	0.0043	1.8	11.8	2.8	1	23	1139	1161	1139	1161	0.97
15	19	0.0013	0.56	13.4	1.8	2	21	1167	1186	1166	1188	0.94
16	19	1.5e-05	0.0065	19.5	0.1	1	23	1194	1216	1194	1216	0.96
17	19	2e-05	0.0087	19.1	2.3	2	23	1225	1246	1224	1246	0.96
18	19	0.00011	0.049	16.8	2.6	1	23	1252	1275	1252	1275	0.97
19	19	0.0032	1.4	12.2	3.0	1	23	1280	1303	1280	1303	0.96

Sequence Information

Coding Sequence: ATGCGCATGGTAAAGAAACTGTTCCTGGCCGGAGATCCACTTCCCCAGTGCCACTGGGAAGAAGTACCGGGTGTCGAGGTGCCACACCCCAACTTCCTGGTCATGGAAGTGCTGGTACAGATGCAGATAAAGGTGGATGTTGACGTACAAGCTGGTGATGCTGGTGTACAGACAGAATGCAATGAAGTGACACAAGTTACGCAGACAGACGCAGGCCCCCAGAAAGAAGCAGTGGTGATCTCGCTGGACGATACACTTGTTACACAGGATGCAGTGGTGCAAGATTCAAAGGCACCATCAAGAGCCAGGTTAACTTTGCCTGCAAATTTGGAGGTTCAGAACCTTGCAGACAATTCCACCACAGTCATTGCCCGAGCTGCGTTTCCAAGAAATGTGCAGTTTGGTCCATTTGTTGCTAAACACACTCAGATGTTAAATCCTGCAATAAATTTTCCTTTGAAGATATTTGGTAAAACAGAAGAGTCAAGCTATTTCCTGGACACCAGCGATGAGGAAAGTTGCAATTGGATGTGTCTGGTTGCCCCAGCAACATCTTGCAAGGATCAGAACCTCATCTGTTACCAGCATGGCAAGGTGGCGGTTGTGGTCCAATTGGATCCTGTGGGGGCCTCCAGCGCAGCCCAAGGGGCTAAACCCCGAGTGTCGAAGACAAACAATAAGAAGATGAATAAGATTCCGGAGCGGGCTCACCTACTTATGGACCAGAACATATTCTTCACGGTGATGAAGGATATCCAGCCTGGCGAGCAGCTCAAAGTGTGGTACGCCCCATACTACGCTGTCAAGATGGGTGTGCGCCCGATTACCATGGATCTCACAGCTAACGAGGGAGATGAACAGAAATGGCCTAGCAGAAGTGAAACAGCTCAGTGGGTAAACGTGAATGCAAAGCGTCGGTCCCGGGGAAACAATTTAGCGAGTGCACGGAAAGATGAAGTTCTGCTGTCCAATAGTTTTCAGGTGCTGGAAACGAACCCAGCAGCACAAAACCAAGCCGACACAGAAGAAACGGTGCATTCTGAAGATGGAAGCCAGCAGGAAAGCACGCcgagcaaaactaaaaatgtggGTGAACACGTGTTCGAGAAAAGAtcagccataattataggggactcATTAGTACGTCATACTAGTGAATATGTGGACGAAGACATCATAGTGTATTGTTTCCCAGGAGCCAGGCTACAgcatattgaaaagaaactacGGGAAAACAGAGATGACCCGGACAACATAGTTATACACGCGGGCACCAACAACGTATGCAGCGCAGACACGCCTGATGAAATCATGCGAGAAACGTTACAGCTGGTGAAAACCACAAAGGAACTCTTTCCACGAGCCCGGATTTGTGTTAGTGCTATTTTACGCCGCAGAGATGAAGATGATCGCTTCATAGACGCTATAAACTCAGTGCTTGAATGGTTATGCAGTGAACATGACTGCATGTATGTGGATGGAAATGCATGGATTAGAGACTATGACTTGGGTCGTGATGGATTACATTTGAACAGAAGGGGGGTGAGTCGCGAGGTGACAGAGAAGCTGGCGCAGCAACTGCCGGCGAAGCAGTTGGGAGCAAGGCAGGTACCAGACACGTGGCGCTGCAAGCTCTGCTCGACGGAGGAGACAAGCGTGGTGATGTTCGCCAAACATCTCATGACTCACTACAAGCGCTCGCTCACAGTACAGGGAGACAAACTCCTGTCTTGTCACATCTGCCACATGAAGTTTGCTAACGAGAAGATGTTGGTGAAACACAAGGTTGTGAGACACAAAGTGAAAGTTCAGCGTCCAAGACTACTTGAAAATGTGAAAGAGGAAGAAAGAACCGAGGCAGATGAAAcagaggaagaggaagaagaaaatggCATGACAAGCATAGTAATAGCAAATCTAACACCGCAGTTCTCACAAAATGGGGCACAAACTATATTTGTGACGAACACAAATGAGGTGTTTCCAGACGCACTTTCGGCTGACGGCGAGGTTAACGACAGCCAGAACGAGGCTCTGAACGTCCTTCTGGAACAGCTTCAGTCCGAGACTGCATTCACCAGCAGCACCTCGAAAGAAAACAACGAGAATCACAGCAGCAATATCCTTGTTGACGCAGCTGTTATAGAGAACTGCGAAGATATTGGAAATGACTTGTTAACAAAGATAGAGTTacaaacagagagagaaaaaCCTGAACAGCAGGTGCAAGTTGATAACAATGAGTTTCTGAACACATTTCAGTCTTGTAGTGACGAAGTTGTGCAAGAGAGTGCATCACAGAATAACTGTACCAAAGAATCTGGTGTTGACACACAGAACGCCTCACTTCTAAACCTCATGTCCTGCGCAGAGGAATCTAAACCATCCGACGATGACAAGTCGTCAGATATTGGGCCCCCATATAACTGCGACATCTGCAATAAGGAGTTCCACAAGGCAGATTACCTCTACCGACATCTGCGCAAGCACACGGGAGAATTCACGTGTGTATCTTGTCTGGCCGTGTTTGCACGTAAGGAGAGTCTAGTGAACCACTCTTGCTTCGTCGACAACAACAGCCAAGCAGAAAACAAGTCATCTCGCACATGCCCCTACTGCCAGAAGGTTTTCCGTATGAAGAAAATGCTGAAGAGGCACATGGCAAAACACACAGGTGAGTGGAAGTGCAAGAGTTGTGAACGGATATACTCGTCCAGGACGACGCTGGCCGCACACAGATGTACCAGCAAGAAGACGACACAGATGTATCACTGCCAGGTGTGTGGGCGAGAGTTCCTGCGCCAGAGCTACCTCAACAAGCACATGTTGCTGCACAGGGAACTGCATCCCTGTACCACGTGTGGCAGGAAACTGCCAGTTGGTGAAGCTTTTGTCCTGCACCAGGATTACTGTTCTCAGGAGAAGCTGCTGGAGACGGCGAGAGAGGCCACCTGCCCCAACTGCAGTACAACATTTGTGCACGTGTTGACATACAGACAGCATGTTCTGGAGCACACACATCCGTTTCTGTGCCAGCAATGTGGTCGAAGGTTCTCCACCAACGAGAACAAAGTGCTGCACAGCTGCACCAATAAGATGCTGCTATGTGATCTGTGTCTGAAGAGCTTCTCGCACATGTCCGAACTTGTGCAACACAACGCAGCACATGGTGTCCCCCAGTTCCACTGTTACGAGTGTGGCAACAGCTTCCATCACAGCGAAAGCTACATGAACCATGTGTGTAACACGGAAGATGATGATGGTACTAAAGGAGCACGcaagaagagaaagaagaagaccAGTCAGGCGGAAACAAGCAGCAAATCTGGAGGACTTGTTTGTGATGTGTGTGGGGATGTTTACAAGACCATACACAGTCTTAAAGCTCACAGACAACTGCacgGTGAGCGCAGGTTTGAGTGCGAGGTGTGTGGCAAGAGGTTTCACAGGAGAGACATCCTGCAGGAACATCACACCGTACATCAGGCACCACAAATACCTTGTCCCATTTGTAACAAGAAACTGAAGACCAAAAAGTCTCTGGATGTTCACATGCGATGTCACACCGGGGAGAAGCCCTACAGCTGTGGAGAGTGTGGCAAGGAGTTCTTCCAGAAGGGCAACCTGCTGAAGCACGCAGCAGTACACAACCCTCTGGCCAGGAGACTGCTGACGTGTGACCACTGTAACAAGAACTTCACATCACGTGACTATCTGTTGCAGCACATGCTGGAGCACACACAGGGTCGCATTCACCAGTGTGAGCTGTGCGACAAGGGCTTCGTAAAGGAGCACATGCTGAAGGCTCACATTCGACAGTATCATGGTGGAGTGACGTTTGTGTGTCCGTACTGTCACATGTCGGTGAGGTATCGACAGTCGATGCGAAGGCATCTGGAGAAGAGACATTGCGACATGCAGCACGAGTGGGATGTACAAGGTTTCCTGGACAAGCTAGAAGCTGGTGTGTCCACAACCAGTCCAGTCATGGACATCCAGGGAGAAGGTGGAGAGATCTTGCTGACAGTATCGAGGATTCCGCTGGTCGAAGGACAGGAGTGTGAGGAACAGACAGATATTGGCAGTCAGATGGAACTGCAGGTGGAAACAGAAGTCCAAGCAGACGAGGTTCCTGTTGACAATGCCTTCATCTTCAATGGGACTGTTACACAGGAAGACAACATTCTGCTGTATGTGCTGGATACAGGAGACGTCGCTATAGATCCGAGCTACTGCGCTGGAGTTGACTGA
Protein Sequence: MRMVKKLFLAGDPLPQCHWEEVPGVEVPHPNFLVMEVLVQMQIKVDVDVQAGDAGVQTECNEVTQVTQTDAGPQKEAVVISLDDTLVTQDAVVQDSKAPSRARLTLPANLEVQNLADNSTTVIARAAFPRNVQFGPFVAKHTQMLNPAINFPLKIFGKTEESSYFLDTSDEESCNWMCLVAPATSCKDQNLICYQHGKVAVVVQLDPVGASSAAQGAKPRVSKTNNKKMNKIPERAHLLMDQNIFFTVMKDIQPGEQLKVWYAPYYAVKMGVRPITMDLTANEGDEQKWPSRSETAQWVNVNAKRRSRGNNLASARKDEVLLSNSFQVLETNPAAQNQADTEETVHSEDGSQQESTPSKTKNVGEHVFEKRSAIIIGDSLVRHTSEYVDEDIIVYCFPGARLQHIEKKLRENRDDPDNIVIHAGTNNVCSADTPDEIMRETLQLVKTTKELFPRARICVSAILRRRDEDDRFIDAINSVLEWLCSEHDCMYVDGNAWIRDYDLGRDGLHLNRRGVSREVTEKLAQQLPAKQLGARQVPDTWRCKLCSTEETSVVMFAKHLMTHYKRSLTVQGDKLLSCHICHMKFANEKMLVKHKVVRHKVKVQRPRLLENVKEEERTEADETEEEEEENGMTSIVIANLTPQFSQNGAQTIFVTNTNEVFPDALSADGEVNDSQNEALNVLLEQLQSETAFTSSTSKENNENHSSNILVDAAVIENCEDIGNDLLTKIELQTEREKPEQQVQVDNNEFLNTFQSCSDEVVQESASQNNCTKESGVDTQNASLLNLMSCAEESKPSDDDKSSDIGPPYNCDICNKEFHKADYLYRHLRKHTGEFTCVSCLAVFARKESLVNHSCFVDNNSQAENKSSRTCPYCQKVFRMKKMLKRHMAKHTGEWKCKSCERIYSSRTTLAAHRCTSKKTTQMYHCQVCGREFLRQSYLNKHMLLHRELHPCTTCGRKLPVGEAFVLHQDYCSQEKLLETAREATCPNCSTTFVHVLTYRQHVLEHTHPFLCQQCGRRFSTNENKVLHSCTNKMLLCDLCLKSFSHMSELVQHNAAHGVPQFHCYECGNSFHHSESYMNHVCNTEDDDGTKGARKKRKKKTSQAETSSKSGGLVCDVCGDVYKTIHSLKAHRQLHGERRFECEVCGKRFHRRDILQEHHTVHQAPQIPCPICNKKLKTKKSLDVHMRCHTGEKPYSCGECGKEFFQKGNLLKHAAVHNPLARRLLTCDHCNKNFTSRDYLLQHMLEHTQGRIHQCELCDKGFVKEHMLKAHIRQYHGGVTFVCPYCHMSVRYRQSMRRHLEKRHCDMQHEWDVQGFLDKLEAGVSTTSPVMDIQGEGGEILLTVSRIPLVEGQECEEQTDIGSQMELQVETEVQADEVPVDNAFIFNGTVTQEDNILLYVLDTGDVAIDPSYCAGVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -