Basic Information

Insect: Hymenopus coronatus
Gene Symbol: -
Assembly: GCA_030762935.1
Location: CM060896.1:160482674-160491878[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0016 0.68 13.2 0.2 3 23 123 143 122 143 0.97

2 14 2.2e-06 0.00093 22.2 2.1 1 23 172 194 172 194 0.98

3 14 0.0033 1.4 12.2 1.8 1 23 200 222 200 222 0.98

4 14 0.0084 3.6 10.9 1.5 1 23 228 250 228 250 0.94

5 14 1.8e-05 0.0078 19.3 0.5 2 23 257 278 257 278 0.95

6 14 2.3e-05 0.0096 19.0 4.1 1 23 284 306 284 306 0.98

7 14 6.6e-05 0.028 17.5 4.9 1 23 312 334 312 334 0.98

8 14 0.00018 0.075 16.2 3.2 1 23 340 362 340 362 0.96

9 14 8.1e-06 0.0035 20.4 3.1 1 23 368 390 368 390 0.98

10 14 0.00011 0.048 16.8 2.7 1 23 396 418 396 418 0.97

11 14 0.00023 0.098 15.8 3.3 1 23 424 446 424 446 0.96

12 14 9.3e-05 0.04 17.0 0.7 1 23 473 495 473 495 0.94

13 14 1.6e-05 0.0067 19.5 3.7 2 23 502 523 501 523 0.96

14 14 6e-06 0.0026 20.8 2.7 1 22 529 550 529 550 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0016	0.68	13.2	0.2	3	23	123	143	122	143	0.97
2	14	2.2e-06	0.00093	22.2	2.1	1	23	172	194	172	194	0.98
3	14	0.0033	1.4	12.2	1.8	1	23	200	222	200	222	0.98
4	14	0.0084	3.6	10.9	1.5	1	23	228	250	228	250	0.94
5	14	1.8e-05	0.0078	19.3	0.5	2	23	257	278	257	278	0.95
6	14	2.3e-05	0.0096	19.0	4.1	1	23	284	306	284	306	0.98
7	14	6.6e-05	0.028	17.5	4.9	1	23	312	334	312	334	0.98
8	14	0.00018	0.075	16.2	3.2	1	23	340	362	340	362	0.96
9	14	8.1e-06	0.0035	20.4	3.1	1	23	368	390	368	390	0.98
10	14	0.00011	0.048	16.8	2.7	1	23	396	418	396	418	0.97
11	14	0.00023	0.098	15.8	3.3	1	23	424	446	424	446	0.96
12	14	9.3e-05	0.04	17.0	0.7	1	23	473	495	473	495	0.94
13	14	1.6e-05	0.0067	19.5	3.7	2	23	502	523	501	523	0.96
14	14	6e-06	0.0026	20.8	2.7	1	22	529	550	529	550	0.98

Sequence Information

Coding Sequence: ATGGAATGTGAAGTGAAGGCAGAACCTCCTGAAGTAGAAACTGCAAATAATCCTGAGATGCTGGAGGAAAACCTTTTGGAACCTATTGTGGTCTTGTCCACAGATAACACTGAAAAGGACAGCCAATGGAAGAATGCATCTGATGCAACTCATGATAAGTTATTCCTTCCACCATTAAATGAAGGAAACCATAGCAATAACATCACAGAGGAACAATCTACAGAAGCATTACCAAATACTAGTGAAGCTTCAGCTAGTTCTGAGCTTTCAAATAACCACAATGAATCTTTGAGTCCTCTGCAGAGCAAAGAAGAAACCACAGGAGAAGAACAGAGTCAGTCTTCAAATACATCAGCTGAGAACATTTGTAATACTTGCGgagaaacatttacagaaattcaGGACCTTGAAATCCACAAGTCAAAACATTTGGCAAAGGATACTCCAACTAAGCCCCGACAATCAAGACGACGAAGAGTAACTAAACAAACAGTTGAAGATGCGAGCAATATGCACAAATGCAATCTTTGCGATAGAGTATATAAAAACTCTGCATCTCTTCAGAGACACTTGTTGAGCCACTCAAACAATAAACCTTTCAGCTGCGATGTCTGCAGCCAGGAGTTTAAAGAAATGCGCTATTTGAagacacacaaactgacacacacagagaaaaaGAAGCATGTCTGTGAGTTCTGTGGTCAGAGCTTTGTGTCTGTGAAACGATTCGAAAAACACAAAGTGATTCATGCACTTGAACAGACAAATACATGTGATGTTTGTGGCACAAGATTCACAAATGCAGAAGAACTAAAGAAACACAAAGTGTCTCACGTAGGAGAGAAACCATTTTACTGCAGCTTGTGTGGGAAACGGTTCACAACGGTCAACCATTTGAAGTCCCACAAAATCACACACACTGGCGAAGTATCACATACTTGTGAAATCTGTGGTAAGTCATTTACATGGTCCTGTTCCTTTAACAGACACATGCTGACACACACAGGGGAGAAGCGTCATATTTGTGAGGTCTGCGGAAAGGGGTTTATAGAGTCCCACCATCTACGCTCACACAAGTTAATTCACACAGGCGAGAAGCCATATTCTTGCGAGGTTTGTGGGAAGAGGTTCCGCAGACTGAATCATTTGAGTTATCACAGGCAAATTCACACAGGGGAGAAGCCTCATGTATGTAACATCTGTGGTAAAGGTTTCATACAGATACACCAGATGCGGAACCACAAACTGACTCATGCTGGTGAGAAGGAGCATGAATGCACAACATGTGGCAAGAGTTTCCACAGCCTTAACTATCTACGAGCCCATGAAGTGACGCACGTTAACATAGCTGATAAGATGCTTGTTAATGACCAGGTTCAGAAACCTGCTGTATTCCCATACTTTGATGATAATCCATACATTTGCGACGTTTGTGGGAAAAGTTTTACTCAGTCACATATACTGGAGAACCACAAACTGGCACATGTCGTCGAGAAAAATCTCGAGTGTGATACGTGTGGCAAGTGTTTCACTTCAAGTGCATGCCTTAGCTCACACATGCAGTTACATAATAGCATGAAGCCATACCGTTGTCAAACCTGTGGTAAAACTTTTATACACAAACATTACTTTGCAGCACACATACGAACTTGTCTGAATAAGAACTGTGCTATGTCAACCACAAGACTATGA
Protein Sequence: MECEVKAEPPEVETANNPEMLEENLLEPIVVLSTDNTEKDSQWKNASDATHDKLFLPPLNEGNHSNNITEEQSTEALPNTSEASASSELSNNHNESLSPLQSKEETTGEEQSQSSNTSAENICNTCGETFTEIQDLEIHKSKHLAKDTPTKPRQSRRRRVTKQTVEDASNMHKCNLCDRVYKNSASLQRHLLSHSNNKPFSCDVCSQEFKEMRYLKTHKLTHTEKKKHVCEFCGQSFVSVKRFEKHKVIHALEQTNTCDVCGTRFTNAEELKKHKVSHVGEKPFYCSLCGKRFTTVNHLKSHKITHTGEVSHTCEICGKSFTWSCSFNRHMLTHTGEKRHICEVCGKGFIESHHLRSHKLIHTGEKPYSCEVCGKRFRRLNHLSYHRQIHTGEKPHVCNICGKGFIQIHQMRNHKLTHAGEKEHECTTCGKSFHSLNYLRAHEVTHVNIADKMLVNDQVQKPAVFPYFDDNPYICDVCGKSFTQSHILENHKLAHVVEKNLECDTCGKCFTSSACLSSHMQLHNSMKPYRCQTCGKTFIHKHYFAAHIRTCLNKNCAMSTTRL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01410929;
90% Identity: iTF_01410929;
80% Identity: -