Basic Information

Insect: Hymenopus coronatus
Gene Symbol: -
Assembly: GCA_030762935.1
Location: CM060896.1:172808501-172827893[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 7.4e-06 0.0032 20.5 1.3 2 23 136 157 135 157 0.95

2 17 0.00017 0.075 16.2 1.4 2 23 164 185 164 185 0.95

3 17 2.7e-05 0.012 18.7 7.2 1 23 191 213 191 213 0.97

4 17 2.2e-05 0.0096 19.0 8.3 1 23 219 241 219 241 0.98

5 17 0.0011 0.48 13.6 0.4 2 23 248 268 248 268 0.98

6 17 0.016 6.6 10.0 0.4 1 20 274 293 274 295 0.86

7 17 0.0024 1 12.6 4.2 1 23 302 324 302 324 0.95

8 17 1.2e-06 0.00053 22.9 8.1 1 23 330 352 330 352 0.99

9 17 1.9e-05 0.0083 19.2 0.1 3 23 360 380 359 380 0.94

10 17 0.021 8.9 9.6 1.9 1 23 386 408 386 408 0.96

11 17 1.5e-08 6.3e-06 29.0 0.5 1 23 414 436 414 436 0.98

12 17 1.4e-05 0.0061 19.6 0.6 1 23 442 464 442 464 0.97

13 17 3.2e-06 0.0014 21.6 1.6 1 23 470 492 470 492 0.98

14 17 2.8e-06 0.0012 21.8 0.5 1 23 498 520 498 520 0.96

15 17 0.00089 0.38 13.9 0.2 1 23 526 548 526 548 0.98

16 17 4.5e-05 0.019 18.0 5.4 1 23 554 576 554 576 0.99

17 17 1.5e-06 0.00065 22.7 0.2 1 23 582 604 582 604 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	7.4e-06	0.0032	20.5	1.3	2	23	136	157	135	157	0.95
2	17	0.00017	0.075	16.2	1.4	2	23	164	185	164	185	0.95
3	17	2.7e-05	0.012	18.7	7.2	1	23	191	213	191	213	0.97
4	17	2.2e-05	0.0096	19.0	8.3	1	23	219	241	219	241	0.98
5	17	0.0011	0.48	13.6	0.4	2	23	248	268	248	268	0.98
6	17	0.016	6.6	10.0	0.4	1	20	274	293	274	295	0.86
7	17	0.0024	1	12.6	4.2	1	23	302	324	302	324	0.95
8	17	1.2e-06	0.00053	22.9	8.1	1	23	330	352	330	352	0.99
9	17	1.9e-05	0.0083	19.2	0.1	3	23	360	380	359	380	0.94
10	17	0.021	8.9	9.6	1.9	1	23	386	408	386	408	0.96
11	17	1.5e-08	6.3e-06	29.0	0.5	1	23	414	436	414	436	0.98
12	17	1.4e-05	0.0061	19.6	0.6	1	23	442	464	442	464	0.97
13	17	3.2e-06	0.0014	21.6	1.6	1	23	470	492	470	492	0.98
14	17	2.8e-06	0.0012	21.8	0.5	1	23	498	520	498	520	0.96
15	17	0.00089	0.38	13.9	0.2	1	23	526	548	526	548	0.98
16	17	4.5e-05	0.019	18.0	5.4	1	23	554	576	554	576	0.99
17	17	1.5e-06	0.00065	22.7	0.2	1	23	582	604	582	604	0.98

Sequence Information

Coding Sequence: ATGGAGTTCTGCAGGGAGTTCAACGTAGCAACGTACGACGTCGTAGAAGCAATCAAAGAAGAAGCACCAGAAGTTAGGATCCACATCTATGCCGACGACATGGTAAGACTTGCACTTCCCAACTGGAAGAAGACGCTCGACGAGGGAGGACATCTGGCCACAATTCTATTCATTGGAAGCCATGGTAAACAGGAACTGGACTGGCACAAACCAAAAGCTCCGACACTTCACGACATAGATGGCAGCACATGGATACCATCACAAAGCAAGGCATTCGACGTCCCGGAGACAATACTATGTACTAACGTGCTCGATCAGATGGTGATATCAAGCCACGAAGACTCCAGTGCTCCGCTGGAGAATCATGAGATTAAGAAGGAAATTGGAGACACAGTGACCAGCAACAAATGTGAGTTTTGTGGAAGAGAATTCAGGCAGGCGTCACATCTGAGACAACACTTAGCTGCTCACCAGAACAGGAAGACGCGTCGGTGTGACACCTGTGGCAAATGCTTCGGAAGCTCCGGTCTGTTGAGACAGCATGCCTTCATCCACAAAGGCCTGAAACCTCACAAGTGTAAAACCTGTGGCAAATGTTTCAACCACGTCTCAAACCTGAGAACACACGTTTTGATTCACACCGGCGTGAAGAGACACAAATGTTACATCTGTGACAAAACCTTCACTCAAGCACATTGTCTCAAAAGACATCTGCTGACGCACGGCAAGGGCGCATGCGCCAAGTGTGAGATCTGCGGCAGGACAGTCAGCGAAACGTCACTTAAAAAACACATCCTCAGCCACAACAACAACCAACAATACAAATGTGAAATCTGCAGCAAGGTGTTCATTGACGACACTGAGAAACATAGCCACTTGTTGAATAACGAGTGTAAAAAGCCACACAAGTGCGACGTttgtgggaaatgttttactTATGCGACTGCGCAGAGAATGCACACGTTTGTTCACAACGGAGTGAAACCTTACAAATGTGAAATCTGCGGGAAAGATTTCACTACAAAACATCACCTTCAGAAACATCATCTGACTCACGAAAATAACAAATCTCAAGATTGTGAGGTTTGTGGGAAAACGTTCACTGATGCTACAAGTTTGAATACGCATGTTGTTTACCACAGCCGCAGAAAACATCACAAATGTGAATCCTGTGGCAAGAATTTGGGAGATGCCCATAAACTGAAGATGCACACTTTGGCTCACAGAGGAATAAAACCATACAACTGTGAAATATGTGGGAAAAGTTTCAGCGGAAGCTCAAACCTGAAAAGGCACGTCCTGACCCATAGCGGAATAAAACgttacaaatgtgaaatttgtgggaaAGAATTCACTGATGGCTACAAGTTGAGAGAACATGTATTTTCCCACAGTGGGATAAAGCCCTttaagtgtgaaacttgtgggaaAAGTTTTGTCAGTGGTTACAAATTGAAAAAACACATCACGTCTCACAGTGGGGAAAAACCATTTGAGTGTGAAACGTGTGGAAGAAGTTTCAACGATGCTTATAAATTAAAAAGACATGCGCTGCTACACGGTGGGATAAAGCCATTTGAGTGTGAAAACTGTGGGAAAGGTTTTCTTGAAGCATTTGAGCTGAGGCGACACGCCAAGTCTCATATTGGAGTAAAACCATTCAAGTGTGAAACATGTGGGAAACATTTTGCTGACGGTTACAAGTTGAAACGGCATCACATGACACACACTGGAGAAAAACCTTTTGAATGTGCAATATGTGGCAAAACGTATACAACAAAACAGAAGTTGGCAGTACATATTGCGACTCACGTTGTTGAAGAGTTTTGGCAAGGCGTCAGCCATTTCCCGGCGCTGAGTCATGAAACGGTTCACCAGGACAGGATCGTCGTTACCAACTTCAGACAACCTGACCAGCGTACTGCAAACACCACAGGTACCTAA
Protein Sequence: MEFCREFNVATYDVVEAIKEEAPEVRIHIYADDMVRLALPNWKKTLDEGGHLATILFIGSHGKQELDWHKPKAPTLHDIDGSTWIPSQSKAFDVPETILCTNVLDQMVISSHEDSSAPLENHEIKKEIGDTVTSNKCEFCGREFRQASHLRQHLAAHQNRKTRRCDTCGKCFGSSGLLRQHAFIHKGLKPHKCKTCGKCFNHVSNLRTHVLIHTGVKRHKCYICDKTFTQAHCLKRHLLTHGKGACAKCEICGRTVSETSLKKHILSHNNNQQYKCEICSKVFIDDTEKHSHLLNNECKKPHKCDVCGKCFTYATAQRMHTFVHNGVKPYKCEICGKDFTTKHHLQKHHLTHENNKSQDCEVCGKTFTDATSLNTHVVYHSRRKHHKCESCGKNLGDAHKLKMHTLAHRGIKPYNCEICGKSFSGSSNLKRHVLTHSGIKRYKCEICGKEFTDGYKLREHVFSHSGIKPFKCETCGKSFVSGYKLKKHITSHSGEKPFECETCGRSFNDAYKLKRHALLHGGIKPFECENCGKGFLEAFELRRHAKSHIGVKPFKCETCGKHFADGYKLKRHHMTHTGEKPFECAICGKTYTTKQKLAVHIATHVVEEFWQGVSHFPALSHETVHQDRIVVTNFRQPDQRTANTTGT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -