Hcor020338.1
Basic Information
- Insect
- Hymenopus coronatus
- Gene Symbol
- -
- Assembly
- GCA_030762935.1
- Location
- CM060884.1:78512009-78514075[+]
Transcription Factor Domain
- TF Family
- SAND
- Domain
- SAND domain
- PFAM
- PF01342
- TF Group
- Other Alpha-Helix Group
- Description
- The DNA binding activity of two proteins has been mapped to the SAND domain. The conserved KDWK motif is necessary for DNA binding, and it appears to be important for dimerisation [1]. This region is also found in the putative transcription factor RegA from the multicellular green alga Volvox cateri. This region of RegA is known as the VARL domain [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.054 3.4e+03 0.5 0.0 54 68 2 16 1 20 0.86 2 29 0.032 2e+03 1.2 0.0 46 67 36 57 22 64 0.61 3 29 0.08 5e+03 -0.1 0.0 46 63 64 81 50 88 0.57 4 29 0.062 3.8e+03 0.3 0.0 46 63 78 95 61 104 0.59 5 29 0.0039 2.4e+02 4.2 0.2 45 67 105 127 88 130 0.80 6 29 0.0026 1.6e+02 4.7 0.1 46 64 120 138 106 147 0.61 7 29 0.0032 2e+02 4.4 0.2 45 67 147 169 130 174 0.78 8 29 0.0053 3.3e+02 3.7 0.1 46 67 176 197 169 201 0.86 9 29 0.0063 3.9e+02 3.5 0.0 46 67 190 211 189 214 0.85 10 29 0.0024 1.5e+02 4.8 0.0 46 68 204 226 201 230 0.89 11 29 0.069 4.3e+03 0.2 0.0 46 68 232 254 228 259 0.87 12 29 0.065 4e+03 0.2 0.1 46 62 260 276 242 286 0.58 13 29 0.064 4e+03 0.3 0.0 46 63 274 291 257 299 0.58 14 29 0.034 2.1e+03 1.2 0.1 45 67 287 309 269 315 0.69 15 29 0.05 3.1e+03 0.6 0.0 49 68 291 310 288 328 0.57 16 29 0.0051 3.2e+02 3.8 0.0 46 68 330 352 316 356 0.83 17 29 0.039 2.4e+03 1.0 0.0 46 67 372 393 356 398 0.68 18 29 0.031 1.9e+03 1.3 0.0 46 67 386 407 372 413 0.61 19 29 0.042 2.6e+03 0.9 0.0 46 67 414 435 400 441 0.71 20 29 0.043 2.7e+03 0.8 0.0 46 67 442 463 428 468 0.70 21 29 0.057 3.5e+03 0.4 0.0 46 67 470 491 456 495 0.64 22 29 0.012 7.7e+02 2.5 0.0 32 68 484 520 480 524 0.82 23 29 0.026 1.6e+03 1.5 0.0 45 66 511 532 493 539 0.60 24 29 0.16 1e+04 -1.1 0.0 46 67 526 547 522 551 0.83 25 29 0.0036 2.2e+02 4.3 0.1 45 67 553 575 536 579 0.80 26 29 0.13 8.2e+03 -0.7 0.0 46 66 582 602 575 608 0.78 27 29 0.0037 2.3e+02 4.2 0.1 45 67 609 631 592 634 0.80 28 29 0.13 8.1e+03 -0.7 0.0 46 66 638 658 630 663 0.77 29 29 0.051 3.2e+03 0.6 0.0 46 67 652 673 638 675 0.66
Sequence Information
- Coding Sequence
- ATGACCGACTGGAGAagatacatacgtgctggagaagatAACCTGACCGACTGGAGCACATACATTCGTGCTGGAGAAGATAACCTGACCGACTGGAGCacatacatacgtgctggagaagatAACCTGACCGACTGGAGCacatacatacgtgctggagaagatAACCTGACCGACTGGAGCACATACATTCGTGCTGGAGAAGATAACATGACCGACTGGAGCacatacatacgtgctggagaagatAACATGACCGACTGGAGCACATACATTCGTGCTGGAGAAGATAACATGACCGACTGGAGCacatacatacgtgctggagaagatAACATGACCGACTGGAGAagatacatacgtgctggagaagatAACATGACCGACTGGAGAagatacatacgtgctggagaagatAACATGACCGACTGGAGCacatacatacgtgctggagaagatAACATGACCGACTGGAGAagatacatacgtgctggagaagatAACATGACCGACTGGAGCacatacatacgtgctggagaagatAACATGACCGACTGGAGAagatacatacgtgctggagaagatAACATGACCGACTGGAGAagatacatacgtgctggagaagatAACATGACCGACTGGAGAagatacatacgtgctggagaagatAACCTGACCGACTGGAGCacatacatacgtgctggagaagatAACCTGACCGACTGGAGCacatacatacgtgctggagaagatAACCTGACCGACTGGAGCacatacatacgtgctggagaagatAACATGACCGACTGGAGCACATACATTCGTGCTGGAGAAGATAACATGACCGACTGGAGCacatacatacgtgctggagaagatAACATGACCGACTGGAGCacatacatacgtgctggagaagatAACCTGACCGACTGGAGCacatacatacgtgctggagaagatAACATGACTGACTGGAGCACATACATTCGTGCTGGAGAAGATAACATGCCCGACTGGAGAagatacatacgtgctggagaagatAACCTGACCGACTGGAGCACATACATTCGTGCTGGAGAAGATAACCTGACCGACTGGAGCacatacatacgtgctggagaagatAACATGACCGACTGGAGCacatacatacgtgctggagaagatAACCTGACCGACTGGAGCacatacatacgtgctggagaagatAACCTGACCGACTGGAGCacatacatacgtgctggagaagatAACATGACCGACTGGAGCACATACATTCGTGCTGGAGAAGATAACCTGACCGACTGGAGCacatacatacgtgctggagaagatAACATGACCGACTGGAGCacatacatacgtgctggagaagatAACCTGACCGACTGGAGCacatacatacgtgctggagaagatAACATGACCGACTGGAGCACATACATTCGTGCTGGAGAAGAATACCTGACCGACTGGAGCacatacatacgtgctggagaagatAACATGACCGACTGGAGCacatacatacgtgctggagaagatAACCTGACCGACTGGAGCACATACATTCGTGCTGGAGAAGATAACCTGACCGACTGGAGCACATACATTCGTGCTGGAGAAGATAACATGACCGACTGGAGCacatacatacgtgctggagaagatAACATGACCGACTGGAGAagatacatacgtgctggagaagatAACATGACCGACTGGAGCACATACATTCGTGCTGGAGAAGATAACCTGACCGACTGGAGCacatacatacgtgctggagaagatAACATGACCGACTGGAGCacatacatacgtgctggagaagatAACATGACCGACTGGAGAagatacatacgtgctggagaagatAACATGACCGACTGGAGCACATACATTCGTGCTGGAGAAGATAACCTGACCGACTGGAGCacatacatacgtgctggagaagatAACATGACCGACTGGAGCacatacatacgtgctggagaagatAACCTGACCGACGGGGATCGAATGCAGGTTGTTTTGCTAGGAAGTGAACTGTGA
- Protein Sequence
- MTDWRRYIRAGEDNLTDWSTYIRAGEDNLTDWSTYIRAGEDNLTDWSTYIRAGEDNLTDWSTYIRAGEDNMTDWSTYIRAGEDNMTDWSTYIRAGEDNMTDWSTYIRAGEDNMTDWRRYIRAGEDNMTDWRRYIRAGEDNMTDWSTYIRAGEDNMTDWRRYIRAGEDNMTDWSTYIRAGEDNMTDWRRYIRAGEDNMTDWRRYIRAGEDNMTDWRRYIRAGEDNLTDWSTYIRAGEDNLTDWSTYIRAGEDNLTDWSTYIRAGEDNMTDWSTYIRAGEDNMTDWSTYIRAGEDNMTDWSTYIRAGEDNLTDWSTYIRAGEDNMTDWSTYIRAGEDNMPDWRRYIRAGEDNLTDWSTYIRAGEDNLTDWSTYIRAGEDNMTDWSTYIRAGEDNLTDWSTYIRAGEDNLTDWSTYIRAGEDNMTDWSTYIRAGEDNLTDWSTYIRAGEDNMTDWSTYIRAGEDNLTDWSTYIRAGEDNMTDWSTYIRAGEEYLTDWSTYIRAGEDNMTDWSTYIRAGEDNLTDWSTYIRAGEDNLTDWSTYIRAGEDNMTDWSTYIRAGEDNMTDWRRYIRAGEDNMTDWSTYIRAGEDNLTDWSTYIRAGEDNMTDWSTYIRAGEDNMTDWRRYIRAGEDNMTDWSTYIRAGEDNLTDWSTYIRAGEDNMTDWSTYIRAGEDNLTDGDRMQVVLLGSEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -