Hcor014181.1
Basic Information
- Insect
- Hymenopus coronatus
- Gene Symbol
- -
- Assembly
- GCA_030762935.1
- Location
- CM060882.1:181289805-181302514[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-11 1.4e-07 33.8 0.0 2 39 27 65 26 69 0.92 2 2 2.2 5.1e+03 -0.0 0.0 23 39 96 113 93 117 0.83
Sequence Information
- Coding Sequence
- ATGTTCTACGTCACTAGTACGCCTTCTGTGTGTAGCTCGAGACTTCTCCAGTACGTAAGCTCCTACCGCAATTACACCGACAATGCCCTAAATGAAGCGTTGCAATTGGTCATAGATAAGAAGCTGTCTTTGAGGGAAGCATCTCAAAGATACAGCATCCATAAAAACACATTATGGATGAAGACGAAACAGGCACGGGGTCTGACTGACAAACCGGCAAAAATTCCGGGTAGACAGCCTGTATTCACTCAGGAGGAAGAAAATAGGTTTTTGGCTCACGCAATTGCCATATCATTTGGTTTTCCAATAACAACGTTTGATTTACGTTGTGTAGTGACAACATATCTGGAGAAGAGTGCCCGTGTTTAA
- Protein Sequence
- MFYVTSTPSVCSSRLLQYVSSYRNYTDNALNEALQLVIDKKLSLREASQRYSIHKNTLWMKTKQARGLTDKPAKIPGRQPVFTQEEENRFLAHAIAISFGFPITTFDLRCVVTTYLEKSARV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -