Hcor065532.1
Basic Information
- Insect
- Hymenopus coronatus
- Gene Symbol
- -
- Assembly
- GCA_030762935.1
- Location
- CM060895.1:149428369-149429800[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-11 2.8e-08 36.0 0.3 8 43 2 37 1 39 0.91 2 2 6.7 1.5e+04 -1.5 0.1 28 42 221 235 221 236 0.86
Sequence Information
- Coding Sequence
- ATGGCCATAGCAGCCGTTCGAGGCAAGAAAATGGGTGTAAATGAAGCTAGTAGACAATATGGAATACCGTCACGTACTCTTCGCAGAAGAATTGCGAAACATTCTACAAAGAAGCTTGGACTTGGACCTTACGGTATTCTAGGATACGATAGTGAAATTCGCCTTGTTAACTACATCAAGAGGCTTGAAAGTTGTGGTTTTGCACTCACCAACAAGGTTCTCAGGATTCTAGCATATTCGTTTTGTGAGAAGTTATGCCTTcatggaaaattcagaaaaagatgGGCAGGCTATGACTGGTTCAGATCTTTTATGCTGCGACATCCTGATCTTAGTATCAGGCAGTCAGAAGGACTATCCATTGCACGAATCCGAGGACTTGGTAGGAATGTTGTGCATCAGTATTTTAACTTGCTGAAGAGGACCATATTGGAACACGACTTTGCTAACAAGCCTGGCCAGATATTTAATTTAGATGAGTCAGGTCTTCAACAAGGTGGGCACAAGTGGTTGTCACAAAGGGCTCCAAAGAGACTCAACAGCAGATTCAGATCTGCTTCCACAACCTTCCTGTTCAAAAACGACTCACCTACACATCTATCCACATGCATTAAAGAAACACCAACCAAAATCCTCATGAAGCTGTCCCCTCCACCAAAGATTCCTAAACCAAAACTGTCAAAAGTTAAAAGGAACATATATGGGCGTGTTCTCAGCAGTGCTGACACCATAGTAAAGAACAAGCAAGATGCTGTAGCAAAGAGTAAACAATTGCCAAAGGTGCAGAAGCTACAACTACAAACGTAA
- Protein Sequence
- MAIAAVRGKKMGVNEASRQYGIPSRTLRRRIAKHSTKKLGLGPYGILGYDSEIRLVNYIKRLESCGFALTNKVLRILAYSFCEKLCLHGKFRKRWAGYDWFRSFMLRHPDLSIRQSEGLSIARIRGLGRNVVHQYFNLLKRTILEHDFANKPGQIFNLDESGLQQGGHKWLSQRAPKRLNSRFRSASTTFLFKNDSPTHLSTCIKETPTKILMKLSPPPKIPKPKLSKVKRNIYGRVLSSADTIVKNKQDAVAKSKQLPKVQKLQLQT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -