Hcor058138.1
Basic Information
- Insect
- Hymenopus coronatus
- Gene Symbol
- -
- Assembly
- GCA_030762935.1
- Location
- CM060894.1:77081026-77081907[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.6e-15 1.7e-11 46.3 0.1 3 45 37 79 35 79 0.92
Sequence Information
- Coding Sequence
- ATGTGTCTCTCACTAGATATCCCATCTCTTCAAGGTGTTTCTCCTGGAATAGCAACTTATGTGCCTACACAAAAACCAGAATGGAAGCGCTACAAGCAGTACACTAGAAATGACATCATGTCAGCAATTGAGGCAGTCCGCAATGGGATGTCAGCTCTCCAGGCTGCACGCAAGTATGGGGTCCCTAGTCGCACGCTTTATGATAAGGTAAAGAAGATGGGGATCACTACAAGTCGCCCATTTAACAAGCGAGGTTCCAATGTGGGCACTGGTGGTTCAAGCTATTATCCCTATAGCAGTAGTGGTGGCAATGGCGGCTCAGGAACTAACTCGATAGGGGGTGTGTTTGGAGCAGTGGGTGGAGGTAGCGAAAGTGATGAGCAGGTGCTAAATCCACCTCCAGGAGGTGCCATAATGGAGCCACTGTTCCTACAACATGCACTAGATGGCATGAAACGTGAAATAGGAGAGCGTGAAGCCATTGTTGCAATGGCTGCAGCAGCGGCTCATGCAGCAAGAAGTGGTAACTCATCATCAAGTCCAGGAGAGAACGGAAATGGTAGTGGTCGCTCCCCAAGTCCCAGTCCTAGCCTCATCAAGTACATGAGGGGACATAACAGCATGACACCCAGTCCGGCAGCTCCGGGTAATGAAATCCGTCCTCCCAGTGGTGGTAATGAAGGTGGCGAGGAAGATGATGACCAGGTGGAGGACCTGTCGGTGACTCGGAAACCTGAGCCTATGCGGGTTATTATGCCCCCAATGAGTGCCACACCCTTGGCAGGAAAAAAAGATGAAGTGCATGGTGAGGATGAGGTGAGAGAACACTGTTCCCCCGATGGGCCTCAGAGTACTCCAATAGAAACGGCTGAAAGGGATTGA
- Protein Sequence
- MCLSLDIPSLQGVSPGIATYVPTQKPEWKRYKQYTRNDIMSAIEAVRNGMSALQAARKYGVPSRTLYDKVKKMGITTSRPFNKRGSNVGTGGSSYYPYSSSGGNGGSGTNSIGGVFGAVGGGSESDEQVLNPPPGGAIMEPLFLQHALDGMKREIGEREAIVAMAAAAAHAARSGNSSSSPGENGNGSGRSPSPSPSLIKYMRGHNSMTPSPAAPGNEIRPPSGGNEGGEEDDDQVEDLSVTRKPEPMRVIMPPMSATPLAGKKDEVHGEDEVREHCSPDGPQSTPIETAERD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -