Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.0016 3.7 7.6 0.0 2 17 74 88 74 91 0.90

2 5 0.0042 10 6.2 0.0 4 17 95 107 93 115 0.83

3 5 0.022 52 3.9 0.0 4 17 114 126 112 129 0.77

4 5 0.0074 18 5.4 0.0 4 16 133 144 131 149 0.83

5 5 0.13 3.1e+02 1.5 0.0 5 13 153 160 150 161 0.74

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.0016	3.7	7.6	2	17	74	88	74	91	0.90
2	5	0.0042	10	6.2	4	17	95	107	93	115	0.83
3	5	0.022	52	3.9	4	17	114	126	112	129	0.77
4	5	0.0074	18	5.4	4	16	133	144	131	149	0.83
5	5	0.13	3.1e+02	1.5	5	13	153	160	150	161	0.74

Coding Sequence: atgttagttagtcgtccagttattgccctgtacgatccaggtgctcgtcttgaggtgcatacagatgcaagtaaattaggaataggtgcaatacttatccaagattgtgggcaaggtcttcagcctgtgatctattacagtaggcaaacctcacctgaggaacaaaaattccactcatatgagttggagacacttgccgcaCCCTCTGTGGCGTTACCAGCCCACTGTGGCGTTACCAGCCGTCTGTGGCGTAACCAGCCCTCTGTGGCGTTACCAGCCCTCTGTGGCGTTACCAGCCCTCTGTGGCGTTACCAGCCCTCTGTGGCGTTACCAGCCCTCTGTGACGTTACCAGCCCTCTGTGGCGTTACCAGCCCTCTGTGGCGTTACCAGCCCTCTGTGGCGTTACCAGCCCTCTGTGGCGTTTCCAGCCCTCTGTGGCGTTATTGGCCTTATGTGGTATTACTAGCCCTATGTGGCGTTACTAG
Protein Sequence: MLVSRPVIALYDPGARLEVHTDASKLGIGAILIQDCGQGLQPVIYYSRQTSPEEQKFHSYELETLAAPSVALPAHCGVTSRLWRNQPSVALPALCGVTSPLWRYQPSVALPALCDVTSPLWRYQPSVALPALCGVTSPLWRFQPSVALLALCGITSPMWRY

Sequence clustering based on sequence similarity using MMseqs2