Hves005141.1
Basic Information
- Insect
- Hyles vespertilio
- Gene Symbol
- -
- Assembly
- None
- Location
- HLhylVes1:256798-267847[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.00034 0.028 15.3 1.3 1 23 398 421 398 421 0.97 2 10 0.00012 0.0099 16.7 0.4 1 23 428 450 428 450 0.96 3 10 0.0002 0.016 16.0 0.3 3 23 487 508 485 508 0.96 4 10 0.00014 0.012 16.5 1.2 2 23 511 533 510 533 0.95 5 10 0.00056 0.046 14.6 2.2 1 23 542 564 542 564 0.97 6 10 0.82 67 4.6 0.2 2 21 574 593 574 598 0.92 7 10 8.4e-05 0.0069 17.2 3.6 1 23 603 626 603 626 0.95 8 10 0.0027 0.22 12.4 3.2 1 23 632 654 632 655 0.96 9 10 9.6e-06 0.00079 20.1 3.4 1 23 663 685 663 685 0.97 10 10 0.0034 0.28 12.1 0.1 1 23 691 714 691 714 0.96
Sequence Information
- Coding Sequence
- ATGAGCAAAATAATAAAGAATCCTGACTGCTACAATTTAAGAATGTCACTTGATACATGGGAATATTTTTATTTATTTCAGAAATTAAAACCGCTATCTTCTCTATCAAAATCAACGAAGATACTCTACGATCATGAATACTGTTTCTTTGATCCACTAACTGATTCAGAATTTGACAAAATCGAACCTACAGAAATCAAAATTGAACCGTTAGACAAAAATGATATTTCAGACACAGACTTCAAAGATGTAGATGATATCAAAATTGAACCGTTAGACAAAAATGATCTTTCAGACACAAACTACAAAGATGTAGATGATATCAACATTGAACCGTTAGACAAAAATGATCTCTCAGACACAAACCACAAAGATGTAGATGATATCAACATTGAACCGTTAGACAAAAATGATATTTCAGACACAGACTTCAAAGATGTAGATGATATCAAATTGAACCACACAAACTACAAAGATGTAGATGATATCAACATTGAACCGTTAGACAAAAATGATCTTTCAGACACAGACCACAAAGATGTAGATGATATCAACATTGAACCGTTAGACAAAAATGATCTTTCAGACACAGACCACAAAGATGTAGATGGTATCAACATTGAACCGTTAGACAAAAATGATCTTTCAGACACAGACTTCAAAGATGTAGATGATATCAAAATTGAACCGTTAGACAAAAATGATCTTTCAGACACAAACTACAAAGATGTAGGTGATATCAACATTGAACCGTTAGACAAAAATGATCTTTCAGACACAGACCACAAAGATGTAGATGATATCAACATTGAACCGTTAGACAAAAATGATCTTTCAGACACAGACCACAAAGATGTAGATGATATCAACATTGAACCGTTAGACAAAAATGATCTTTCAGACACAGATTACAAAGACACTGATGATATATACGTTGATAGTATGAAAACAAAAAGGAAAAATATAGATAATAAATCAGACAAACATTCTGAAGTAAAAGAAACGTTAGATACAGGTAAAGACAAAAAAAAAGTAGCAAGTATTAAACCTAAAAGAAAATTAAATCATAAGTTAGATAAACCATCagaagaagaagtaagggataagtttgaagaagtagtatttacagaagaagagatggaaaagaacagagaagagaagagaagTCAGCCCAACTTCAAGAAGATTCCTTTTAAGTGTGATACTTGTGTGCTTGGGTTTACGAGGAAGGAGACTTTTGAACAGCACATGGCAAAGAAACACGATGAGAGTAGAGGCGACTTCCTCTGCCCAGTTTGCTCAATAAGGTTTCCCTCAACAGCCTCATTGGAGCGGCACAAACGGAAACATTATGTGTGCTACCGTTGCAGATTGTGCAAGTATGAGACGGTTGAATTGTGGTCTGCTTCCAACCACTGCAGGGCGAAGCATAGGAATGATACCAAGGATAGGATACACTGTGCCCAGTGCGGTGCAGTTTGCAGGACTCCGGAAGATTTAGCAGAGCACATAAGAACAGAACACACTTTGTATTGCAATGAATGTGGGGAAAAATTTAAAGGCAAGAAAACACTTAGGTCGCATAAATTGCGCATCCACGCAATCTCAAAGTTTCAAAGAGAATTCACATGTGATCTATGTAACAGGAAGTTTATGACCAAATTTCGTTTAGAAACTCACATGGTGTCTCACAACGCTAACATAGCCAAGAAGTTGGCCTACTGCAGTGTGTGCGACGTGCAATATAAGAATATTTATGTGTACAGAAACCATTTGAATAACAGCGCCAACCATTCGGAGAGGCCGTATACATGTAAGGAGTGCAACAAGAAATACGCATCGAAAGTGTATTTGACTAAACACTACAATTTCTACCACCTTCGGAAATCTCAGTATAAGTGTGAAGAATGCAATAAGCTGTTTATGTCTGACTGGCTGTTGAAGAATCACAAGCAGAAGCACCACGGGCTCAGTAGATCCAGAGATCACTCCTGCAATGTGTGCGGGAAGAAGTTTTTTACTACATCCACTCTCCGCGTGCATCAGTTGACTCACTCTGAGCAACGCACGTACATGTGCGAGGTCTGCGGAGACACGTTCCGTCAGCTCCCAGCGCTGTACACGCACGCCAGGCTCATGCACAAGGCTGCGAGGAAAAAATGA
- Protein Sequence
- MSKIIKNPDCYNLRMSLDTWEYFYLFQKLKPLSSLSKSTKILYDHEYCFFDPLTDSEFDKIEPTEIKIEPLDKNDISDTDFKDVDDIKIEPLDKNDLSDTNYKDVDDINIEPLDKNDLSDTNHKDVDDINIEPLDKNDISDTDFKDVDDIKLNHTNYKDVDDINIEPLDKNDLSDTDHKDVDDINIEPLDKNDLSDTDHKDVDGINIEPLDKNDLSDTDFKDVDDIKIEPLDKNDLSDTNYKDVGDINIEPLDKNDLSDTDHKDVDDINIEPLDKNDLSDTDHKDVDDINIEPLDKNDLSDTDYKDTDDIYVDSMKTKRKNIDNKSDKHSEVKETLDTGKDKKKVASIKPKRKLNHKLDKPSEEEVRDKFEEVVFTEEEMEKNREEKRSQPNFKKIPFKCDTCVLGFTRKETFEQHMAKKHDESRGDFLCPVCSIRFPSTASLERHKRKHYVCYRCRLCKYETVELWSASNHCRAKHRNDTKDRIHCAQCGAVCRTPEDLAEHIRTEHTLYCNECGEKFKGKKTLRSHKLRIHAISKFQREFTCDLCNRKFMTKFRLETHMVSHNANIAKKLAYCSVCDVQYKNIYVYRNHLNNSANHSERPYTCKECNKKYASKVYLTKHYNFYHLRKSQYKCEECNKLFMSDWLLKNHKQKHHGLSRSRDHSCNVCGKKFFTTSTLRVHQLTHSEQRTYMCEVCGDTFRQLPALYTHARLMHKAARKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -