Hves003505.1
Basic Information
- Insect
- Hyles vespertilio
- Gene Symbol
- -
- Assembly
- None
- Location
- HLhylVes1:317286-324130[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.13 10 7.2 0.7 1 23 44 66 44 66 0.84 2 17 9.7 8e+02 1.2 0.2 12 22 71 81 70 81 0.88 3 17 0.00034 0.028 15.3 1.2 2 23 94 116 93 116 0.94 4 17 7.6e-05 0.0062 17.3 2.8 2 23 140 161 139 161 0.97 5 17 0.014 1.2 10.1 0.2 2 23 165 186 164 186 0.96 6 17 0.015 1.2 10.1 6.7 1 23 191 214 191 214 0.94 7 17 0.49 40 5.3 3.6 2 23 226 248 225 248 0.94 8 17 0.00074 0.061 14.2 1.1 1 23 254 277 254 277 0.95 9 17 4.2 3.5e+02 2.4 0.2 2 23 327 349 326 349 0.89 10 17 0.023 1.9 9.5 5.7 1 23 372 394 372 394 0.97 11 17 0.0024 0.2 12.6 0.6 2 23 399 420 398 420 0.97 12 17 0.00041 0.034 15.0 2.6 2 23 426 448 425 448 0.94 13 17 0.035 2.9 8.9 2.1 2 23 458 480 457 480 0.95 14 17 0.00011 0.0088 16.8 2.2 1 23 486 509 486 509 0.97 15 17 0.00022 0.018 15.9 4.2 1 23 513 535 513 535 0.98 16 17 6.7e-05 0.0055 17.5 1.8 1 23 541 563 541 563 0.98 17 17 0.0021 0.17 12.8 1.1 1 23 568 590 568 590 0.96
Sequence Information
- Coding Sequence
- atgacacGAGAACTGGAGCGATCGGGTCCAAGAACAAGCATATGGCAAATGACCATATCCGAGAGACAAAACGCGGCAACGTTCCTAGAATTTACAACGGTCAAGCCATTTTTTTATCAGCAAGCGAACTTCAAATGCTTCTATTGCAATGAAGTTTTTCCTGAAATCAATTCGGTCTTGGAACACACGTCTTTTCATTCAACGCCTGACAGATCCAGCTTGTTAAAGCAGCACCTGAGAAAAGGAAAAAGAGTCATCAAGGTCGACATATCAAATCTCCAATGCAGGATTTGTGAACAGAAGTACTCCGATTTAGACGATTTAAGAAAACATCTATGCTTGGTTCATAAGAAAGAGTTTAACTCTGCTGGCAATGGTCTCATGGCTTATAATCTCAGTGCACAGAATGGACTGTTATCGTGCCACATGTGTGCGAAGACTTTTAATTCGTTCTTCCTTCTGAACAGGCACATGAATGTACATTTTAACGTGGTGTGCGAAGTGTGCGGCCTCGGGTTCATGTCTCATCAACGACTAATCAACCACAGGATAGTACACCAGAATGGTATCCATAGATGTGAGAAATGTCACGAGGTTTTCACCACGAAGCTGAAGCTCCGCTACCACGTGTTTAAGAAACACGAGGTGAACAACGCCAAGAAAATAAAACCTTTAAAATGTCCGCATTGTTTGGAACGGTTCTCCGAGCACTATCGTAAGATGACTCATTTAAGGGAAGTGCACGGAATTACGTTCACCTTCGACTGTCACGTCTGCAAGGCGGTGTTTCCAACGAGGCGAGCTCTGACTGAGCACACTACGAAGCTGCATACCCAAAAAATCCAGTGCAAATACTATTCGGATATTACAGACCTATTGAACCACACGCTGAGCCACGAAGTTAAGGACAGAAAGACTATTTTAAAGAAAAATATTCCAAAAGGTAAAAGAACATTGCAAGTAGATATTTCCGAACTCAAATGTAGGCTATGTGATCTAAAACAAACGAATTTAGATGCAATAAGAAAGCATTTAATAGATATTCATTACATAGACTTTAGTAAAGCCTCGAACGGCATGACTGAGTATAAGATGGAGGTCGAAAATGGGTTGTTTTCATGTCATTTGTGTATGAAAACTTTTCACACATTTACACTACTAAACTCGCACATGAACGCACACGTGGGCAAAGTGGTGTGCGAGAACTGCGGTGCGGGTTTCTTGAATCAACATTTACTTAGGAAACACCGAGAAACACATCTCACAAGTAAAATTTATTGCAAGCAGTGCGATCGAGTGTTTCACAAATCTAGTCAATTGAAATATCATACAGAAATCACACACAAAGGAAGGGAACGAGTGAAACCAAAGAAATGCCCACAATGCTCGGAAACTTTTAAAGAACATTACAGCAAAATGATACATTTGAAGGAAGTGCACGGAAACATTAAAACCTTTCGTTGTCATATCTGCAAATCAGCTTTTTCTACCCGACGAGCCTTGACGGAACATATTACAAGGCTGCACACGGAGAAGTTTAAGTGTGAAATATGCTCGAAATGTTTTGGTATCGAGTCAAAGTTGAAGCATCACTTGCGAGCTCACAGCGGGGAGAGGAGCTTCATATGCCCCATCTGCAAGAACGCGTACATGCACAAGATGACGCTGAGGAAACACATGCGCATTCACAACTCCTTCAAATTCATTTGTTCGAAATGTGGAGCGGGATTTTGTGCCAAGAATGAGTTCAGCAAACATATGGATTGGCATTCATCTTGCGATGTTCATGACTAA
- Protein Sequence
- MTRELERSGPRTSIWQMTISERQNAATFLEFTTVKPFFYQQANFKCFYCNEVFPEINSVLEHTSFHSTPDRSSLLKQHLRKGKRVIKVDISNLQCRICEQKYSDLDDLRKHLCLVHKKEFNSAGNGLMAYNLSAQNGLLSCHMCAKTFNSFFLLNRHMNVHFNVVCEVCGLGFMSHQRLINHRIVHQNGIHRCEKCHEVFTTKLKLRYHVFKKHEVNNAKKIKPLKCPHCLERFSEHYRKMTHLREVHGITFTFDCHVCKAVFPTRRALTEHTTKLHTQKIQCKYYSDITDLLNHTLSHEVKDRKTILKKNIPKGKRTLQVDISELKCRLCDLKQTNLDAIRKHLIDIHYIDFSKASNGMTEYKMEVENGLFSCHLCMKTFHTFTLLNSHMNAHVGKVVCENCGAGFLNQHLLRKHRETHLTSKIYCKQCDRVFHKSSQLKYHTEITHKGRERVKPKKCPQCSETFKEHYSKMIHLKEVHGNIKTFRCHICKSAFSTRRALTEHITRLHTEKFKCEICSKCFGIESKLKHHLRAHSGERSFICPICKNAYMHKMTLRKHMRIHNSFKFICSKCGAGFCAKNEFSKHMDWHSSCDVHD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -