Hves006384.1
Basic Information
- Insect
- Hyles vespertilio
- Gene Symbol
- -
- Assembly
- None
- Location
- HLhylVes1:1727932-1731453[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.1 8.3 7.5 0.3 1 22 210 231 210 231 0.95 2 22 0.57 47 5.1 0.3 1 23 273 296 273 296 0.92 3 22 0.0012 0.097 13.6 1.8 3 21 307 325 307 326 0.96 4 22 0.7 58 4.8 0.1 2 23 334 356 333 356 0.89 5 22 0.82 67 4.6 0.2 3 23 377 398 375 398 0.92 6 22 0.00058 0.048 14.5 1.9 1 23 404 427 404 427 0.96 7 22 0.061 5 8.2 0.0 1 23 453 476 453 476 0.90 8 22 0.0027 0.22 12.5 3.5 1 23 481 503 481 503 0.97 9 22 0.0083 0.68 10.9 0.2 1 23 509 532 509 532 0.95 10 22 0.00049 0.04 14.8 1.2 1 23 545 567 545 567 0.98 11 22 0.0026 0.21 12.5 4.3 1 23 616 639 616 639 0.96 12 22 0.0022 0.18 12.7 1.8 1 23 699 722 699 722 0.97 13 22 0.00098 0.08 13.8 1.5 2 23 746 768 745 768 0.95 14 22 0.048 3.9 8.5 0.2 2 23 774 796 773 796 0.95 15 22 0.0048 0.39 11.6 0.2 1 21 840 860 840 861 0.95 16 22 0.00059 0.049 14.5 0.6 1 23 871 893 871 893 0.93 17 22 5.4e-05 0.0044 17.8 0.3 2 23 981 1003 981 1003 0.93 18 22 1.6e-07 1.3e-05 25.7 1.4 3 23 1010 1030 1009 1030 0.98 19 22 0.02 1.6 9.7 2.0 1 23 1047 1069 1047 1070 0.96 20 22 0.089 7.3 7.7 0.0 1 23 1091 1113 1091 1113 0.97 21 22 0.0058 0.47 11.4 0.4 1 23 1119 1142 1119 1142 0.95 22 22 1.2e-05 0.00097 19.9 0.5 1 23 1150 1173 1150 1173 0.96
Sequence Information
- Coding Sequence
- ATGGATTCTGAGAACGAAATTGAAATTGCCAGACAACAAGAAAATCATCACGATGGTGACGAACAAAGTGAAATGCATGATAACATGCACCATGATGATGACAACCACATGGACGAAGGTCACAGTGATAACGACAAAGAACAAAATGACGAGACAGTTGACAGTCAAGATAACATGGTCATCGATGAGAATGCAGAAATTAAAACCGAGGAATATGACGGCGAAGACGGTGAAAAAGGCAATGAAGATAAGGACCATGACGAAAATGAGATGAATCATGATGAAAATGACGAGGATGATGAAGAAATGCCGCCGATAGGCATAGCACCCGTCGTAGAAATAAATGAAGATCTCCAAGGTAATTCCTATAATAGTGAACTTAACGAAGAGGAGGAGGAAGAAGAAATGGATGAAACGGGTGACCCTAATGACACCGTCGATGATTCCATGAAGGAACTCGACCCTGACAAATTGTATGTCACAAAAACACAAAGAGACTTTATCTTAAAGTACCGCGACGTCATTGAGCAAATCAACACGAAGCGTTGCTTGTGCTGTGACCGAGAACACCCTCGAAGGAAAGCAGTTATTCAGCATTTACAAAAAAATGGGCACAAGGTCCCCAAACATACGTGTTATAATTGCGTCATAACTTTCGGTCATATTGGCGCCCTACTTAGCCATATGAGATCGAATTCTTGCACTGATCTCTGGAAAATAATTTACAACGAAAATGGCATCACCGATGACTTGGTTCTAGAGGACGAGCCGAAAGACAATAAGGTCCAATATAAGGATATTTTCAATGCGCGATCATATGCTTGCAAGCTGTGTCCAGCGAAATTCCAGCTAAAACAATTCATAATGAAACACATGCTAGACGTACATGAAGACGGACAATCCAGAGTTCCTCTTGGTTGCGTCCACTGTCGAGCCAGATTCAAGGATAAGAGTTTACTAAAGAAACACATACGTAACGGCGAATGTACAGTATATATATCCTGCGACTTGTGTTCTGAGAAGTTCGGGAACATGCAGGATTTCAACGACCACGCCTTGGCAGTCCACGCCGGCAGTTTTGATCAGTCTGACAATGCGAGTAAGTGTGTAGACGGCCGGCCGACGGATTGTCCTCTATGCGGCAAAAAGAATAGCAACTATCCCATATTAGTGAAGCATTTGAAAACTGTTCACAATGAAGAGAAACCTCATTACTGCCAACATTGTGACGCTAAGTACGAGCAAGCTGCTGACCTCAACAAACACATTTATACAGAGCATTCTGACAGGACTTTGGGCATACAGAGTAATGAGCCCGACATGTCTCTCGTCAAAGAGGAGGCTGAGGAATATCACTATTCGTGTACAGAATGTAACGCGATCTTCGAGACTGTGGATGCGTGGACCGATCACCAAGTAGCAGAACATAATCAGGTGGCGCACCACTGCGACCAGTGCGACAAGAAGTTCCTGCGGCCGTCGGAACTGGCAGAACATAAAAACACACATCTGCGAGTAAAATTCTATCCCTGCAGCGTTTGCTCCAATTCGTACAGCACCCCGCAGAAACTCTCCGAGCACGTGCAACAAGCACATCCCGGTGTCAGAGCATTGTCTGCCACGGAGTCTGAATTTTATTGCGAGATATGTATAAGATCATTCAAGAGTCGTCAAGCCTATTCAAACCATATGCGTATTCACGCCAAGGTTCCCACCACTAATAGAAAACCGGGTGAACCAAAGGGTTTTGCGCCGCAGATTATCGGAAAACCCATTAAACAGTTTTCGATGATGCAGCCTGGGTTCGTTTCATTCAAGCCCAGTTATAACGTTCCTAACGCACCTTACTGTTGCGATCTATGCGGCAAAGGATTCATGCACAAAAAGAACATTTGGAAGCATAAGAAGGTGTTGCATGCTGATATTTTGAAAGATCGGAATGACAGCGAAGAAAACACTATGCAAGCGTCAACCGAAGAGGAAGAATTTAACAATGAAGAAAATGGCACCGGTTTATCAACGCCGCAATTTAATAGTTTCAATTTTACCAACTTCACGAGTAATTCGCAACAATCACAGTCGGACGGCTTCGCTTACTCGTGTGAGCTGTGCTATCAACGCTTCCCGCTGCGCAGTAGTTTATGGAAACATAAACGGAACAAGCACGGTATCATAAGTTCTTTCGACGGTTCTGAGGGCCAGTCGCAACCGTCAGGTGATGGTAGCAGTAGATCCAGTTGCACAATTTGCAAAATAACCTTTGCGGATAAGAAATCCTATTACCGACACAGAAAGAACGTGCACAAGTCATCCGTGCAAATGTGCAAACTGTGTGGAAAACCACTCAACTCTACGTTGGAGCTGTATGAGCATTTAAAGTCGGCTCACGCACAGGAACTATTGGGCTATAATGCAAACCAAGGTTCGAGTAAATCTCAAGAACCGCAACAAGAAATGGAACCGGAGTACGACAACGACCAGGACGCCGTCGATCCGAGCGTCGATTATCAAGCGAGATATCCTTGTGACACTTGCGGTAAACAGTTCGTCGGATTGCTCGCTTTGCAGAACCACCAATGTATAAATCAACTCCCGAGTCAACCGCAAACATTTGATTGCGAAATTTGTCACAAGAGTTATACGTCGATTGCCGCTCTAAAAAGTCATCGCGGTTGGCACTTACGCTCACCTGACGGCAAGGCGGCAGCAAACAATTCCGGCCTATGGATGCCTCAGCACAAGGTGACGAATAAAATTAGCAAATACGAGGTAGTAGATCCCTCTCAGTTAGCTCGAGTCACGCACTCGACGCCCGCCTCCGTCGCAAAGAGAAGATTACCGCCCGAAGTCGAGGTGACAGTGGTCAATCCGAACAAGAAATTACGATCCGACGACTCCATAGAGATGGAACAGCACAGTTCCGGCGCCCTCGAGGACAGATACTGCACCATATGCGACAAAGAGTTCACCAAGCGCGCCGCATATCAGCGACACATGGATGAGGTCCACCAGCCCAATTCGGTGTTCTGTCCCGTCTGCGACAAGAGTTTCACGCGGAAGTCGACACTGCTAGTTCACATGAAGAAGCACTACGAAGGGGGCGAAGGCAGTTCGTCGGCGATAATGGACGACGACACGTACTCGTGCGACTTGTGCAACGCGCAGTGTGACAGCGCGAAGGCCCTGCGCGCGCACCGCGAGCGGCACCACGGCTCGGAGTCGGGCGACTCGGAGGACGACGGCGCCGTGCCCGCGCAGCAGCCCGGCGAGTTCACGTGCGCGCAGTGCGGCGACGGCGTGGCCACGCCCCGCGACCTCATCGCGCACCGCACCATGCACTCCACGCCCACCAAGTTCTTCTGCAACATCTGCAAGGTCTACTTCGCGAGGGCCATCGACCTCTCCTCGCACACGCGGGCGCGGCACTCCGACAACGAGAAGGTCTTCTTCCCCTGCTCCATGTGCGACCGCTCGTACATGAACAAGAAGAGTTTGCAGAGACACATCGAGATGGCGCACTGA
- Protein Sequence
- MDSENEIEIARQQENHHDGDEQSEMHDNMHHDDDNHMDEGHSDNDKEQNDETVDSQDNMVIDENAEIKTEEYDGEDGEKGNEDKDHDENEMNHDENDEDDEEMPPIGIAPVVEINEDLQGNSYNSELNEEEEEEEMDETGDPNDTVDDSMKELDPDKLYVTKTQRDFILKYRDVIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTDLWKIIYNENGITDDLVLEDEPKDNKVQYKDIFNARSYACKLCPAKFQLKQFIMKHMLDVHEDGQSRVPLGCVHCRARFKDKSLLKKHIRNGECTVYISCDLCSEKFGNMQDFNDHALAVHAGSFDQSDNASKCVDGRPTDCPLCGKKNSNYPILVKHLKTVHNEEKPHYCQHCDAKYEQAADLNKHIYTEHSDRTLGIQSNEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLSEHVQQAHPGVRALSATESEFYCEICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFAPQIIGKPIKQFSMMQPGFVSFKPSYNVPNAPYCCDLCGKGFMHKKNIWKHKKVLHADILKDRNDSEENTMQASTEEEEFNNEENGTGLSTPQFNSFNFTNFTSNSQQSQSDGFAYSCELCYQRFPLRSSLWKHKRNKHGIISSFDGSEGQSQPSGDGSSRSSCTICKITFADKKSYYRHRKNVHKSSVQMCKLCGKPLNSTLELYEHLKSAHAQELLGYNANQGSSKSQEPQQEMEPEYDNDQDAVDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQLPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTNKISKYEVVDPSQLARVTHSTPASVAKRRLPPEVEVTVVNPNKKLRSDDSIEMEQHSSGALEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGEGSSSAIMDDDTYSCDLCNAQCDSAKALRAHRERHHGSESGDSEDDGAVPAQQPGEFTCAQCGDGVATPRDLIAHRTMHSTPTKFFCNICKVYFARAIDLSSHTRARHSDNEKVFFPCSMCDRSYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -