Basic Information

Gene Symbol
Znf219
Assembly
None
Location
HLhylVes1:167319-178464[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5e-10 2.7e-07 30.6 0.0 1 38 358 396 358 401 0.87

Sequence Information

Coding Sequence
ATGGAAGAGGTTAAAGAGGAAATTGATAAAACCGCGGTATGCCACGGCTGTTTGAGTATGAATCGTACGGTTTCCAGTTTAGGGGACTATTATAAGATATTTTATCAAGTTTTGGGCGAAGGAAACCTCGATATTAGCGATAGAGTCAATGTGGTCCTATGCTGGGAATGTAAAGCTATTTTGAAGAAATTCAAAACATTCCAACAAAAAATACAGAATGCACGGGACATTTTAGCAGAAGCATACTTGGATTGGAAAAGTCAAGGTGACCTATACAGTCTATCAACCCTTGGAACTGTAAAAAAAGACAATTACGACCTAGCAATAGACGTGGAATATCAAGAAGCTTCTCCCTATATAACTGAACTAGAATTCCCACAAGTTAAAGAAGAAAAACTAGTAATAACACCAGATGTAAATAATTCAGAAGAAGTGAAAGATGAGAGCGATCAGAAATGTGAATACTCAGAATCAGAAAATGATGTCGCTGATACAGAATACACACCAGAAATCAAAAGAACTAAAAAGAAAGAGACACATAACACGGTTAGACAACAGTCTATTCGAATTTATGAGAAATACGCCAACATTTCCAAAGGAGAGAAAATCAATATGGAGGATTTGACGAAGTACTACGTCAAAGTGCATTTGAGTGAGAAAGAGATGGAAGATTTGATGGAGAAAAGAGATAGAAGAGAGTGTAGTTTTCGCAAAATGCCATATCAATGTATGGATTGTAATTTGGGCTATAAGAGGCTGACGGATTTTAACAGACATAACCAGTTTAACCATTGCACGTACGAAAAATCAGTCCGCTGCCTAGAGTGTAACAAGAAACAGCCTTCCCTAGTCAAAATGGAGAAGCACTGGGCTCGGCATACGCGCATGTTCAGATGTCTGCAATGCTACGAGCTGTGTCGTTCCATGGGAGAACTCAAAAAACACTTCAACAGGGCGCATACTTCAGTATATACTTGCAAAACTTGTAACGTGGCTTTTAGTTCTGATATTACGAAGAAAAGGGAGCCATGCAAAAAGCATACAAGAAAATATGGTACTAAGACGAGATACACGCCTGAAACGCTCAGACAATGCTTGGAAAAGATTAAAAACGGTGTCTTAAGCCAACGAGAGGCCGCTAGAGAATACAGCATACCTAGGAGCACTATTAAAAATAAATTAAAAGATAAACACACTAAACAGGTTGGTAGGCCACGACTTAAAGACTTAGATAAGAAAATTAAACCAGTTTGTATGATAGACGAGAAAGTTATTAATGATAAAGAGGTTTCAAGTTCGCGGGAATCGTCAGCAGAGCCTAGATCGTCGTGGATTGAATTGTCTGATGATGCTATGTCGATTGAAAGCGAAGATATTGAAGACTTTGATGATCATTATATTATTGTTGTGAACACACTGCGTGAATTCAGCGTGCACTACAGAAACGATCATCAGCGGATGTACTGCGACCATTGCGGGAAGGCTTTCTTCAAGAAGAGACTATTGGAGGGGCACATCAGACGCAACCACATGCCAGCGTACTGCGTGGTGTGTAACCGCTCGTACCAACATTACCACGTGCTGGAGAATCATTTACGGACGTACCACCCGCACCTCATGCGCGGTGCTGCCAACACAGAGGCGTCGTACTGCGTGGAATGCGACAAACAGTACAGCAGTGTGTACAAATACAAGCGACATATACTGCAGTCGGCTAGACATACGCCGCAGAAGAGGGTCCGAGTCCCGTGTCCAGACTGCGGCAAGGTATTCACGCGTACGACATACATGAATAATCACTACCGCCTCGTTCACGTGAAGGACACCAAGCATCAGTGCGAGCTATGCAGTAAGTTTTTCGCAACGGGCTACGCTATGAGGAAGCACAAACAATATGTCCATGAAAAGAAAATGATGCCAAAAGACAAAATATGCGATCTTTGCGGTCGAGGTTTCAGTACAAACAGAATATTGAATAACCACCGACGGACACACACGGGTGAACGGCCTTTCAAATGCCCCCACTGTGGCGCCACATTCGTACAATGCACCGCTCTACACACACATCTGAAAACACAGCACAAGAATATAGAATCTACTATAATGGCTGAATAA
Protein Sequence
MEEVKEEIDKTAVCHGCLSMNRTVSSLGDYYKIFYQVLGEGNLDISDRVNVVLCWECKAILKKFKTFQQKIQNARDILAEAYLDWKSQGDLYSLSTLGTVKKDNYDLAIDVEYQEASPYITELEFPQVKEEKLVITPDVNNSEEVKDESDQKCEYSESENDVADTEYTPEIKRTKKKETHNTVRQQSIRIYEKYANISKGEKINMEDLTKYYVKVHLSEKEMEDLMEKRDRRECSFRKMPYQCMDCNLGYKRLTDFNRHNQFNHCTYEKSVRCLECNKKQPSLVKMEKHWARHTRMFRCLQCYELCRSMGELKKHFNRAHTSVYTCKTCNVAFSSDITKKREPCKKHTRKYGTKTRYTPETLRQCLEKIKNGVLSQREAAREYSIPRSTIKNKLKDKHTKQVGRPRLKDLDKKIKPVCMIDEKVINDKEVSSSRESSAEPRSSWIELSDDAMSIESEDIEDFDDHYIIVVNTLREFSVHYRNDHQRMYCDHCGKAFFKKRLLEGHIRRNHMPAYCVVCNRSYQHYHVLENHLRTYHPHLMRGAANTEASYCVECDKQYSSVYKYKRHILQSARHTPQKRVRVPCPDCGKVFTRTTYMNNHYRLVHVKDTKHQCELCSKFFATGYAMRKHKQYVHEKKMMPKDKICDLCGRGFSTNRILNNHRRTHTGERPFKCPHCGATFVQCTALHTHLKTQHKNIESTIMAE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00820455;
90% Identity
iTF_00820455;
80% Identity
iTF_00820455;