Basic Information

Gene Symbol
kn
Assembly
None
Location
HLhylVes1:2856841-2963873[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.6e-239 1.1e-234 780.5 0.0 11 387 470 854 461 857 0.97
2 2 1.8e-06 0.043 12.5 4.6 420 513 863 956 855 973 0.70

Sequence Information

Coding Sequence
atgggaaatttaattatctacaagaaaggtcctgagcatgatgggcctaaagtggacggttccggagatatggctttaaacgcgttttccaaaatggcggctctagcggacgccatttttGTGTTAATCTTCAAGTTGTACGATAAATGGACGTTGCGGTACAAGGCGTTTTGCGCTGGCAGCATCATAACTGAGATTAGAGTCTTAACATCTGCAAATTGTTTCCTCACTAATAGAAAACGATTCAAACTAAACATAAGGCATATCAGAGCGGTAGCGGGCATCGTGCACACGTACGCCATAGAACCATTGGTAGACAAGGGGCCACAACAATGGAGGACAGTTCATCATATATACTCGCAAAAATTCTTTAGGTTCCCCGCTTATGATCTGGCAATTTTGGAATTAAGTCAACCATACACATTCAATCAATTTGTGAATAAGATAAATTATGCTACTTTGAATCAGGATTTCGATGGAGTATGTATGTCCACTGGATTCCGATCCGTTAAGAGCTGGTCAACAAATAAGTACGTTTATATAGAAGATGTGAAGTTGCTTAAACGGAGTTTGTGCGAGATGAAATTGTTGCGGTGTTGCCAACTTTACCATTGCACTTCCCATGATCCTTATTACTGGAGAGCTGATCGCGAAATACAAGGTGGAGGCCTGGTCTGTTTTGGTACTGGGGATCCGGCGGAGACTGATGAAAACCAAGGCCTCCTCGTTGGAGTAACTTCTTTGATAAACGTGGGTCTTCCCAACCTTCACACACGGGTGGGAATGTTCAACAAtcgcaatacctcttctaaaccattattccgcaacgccgtacaaaaaccatgcgacaagggaagaaaaagcagcggttgcaacccactccccttcagtggtccaggagcccagagtcaggaatttgtgcccgatatggcgataggctcgccacctatcacgttgtgggacggaacatacagggcgagatgtgggtgtcctggcacctctgcctaccccttctgggatataggcGGATTTGttggcaaacgtagcgtgggacgtcttttggctagatggcaggataattatacaagagagccagcagtgatgtacagtataaatcaacagaccgagctctgtggtatatcttgggagaggcctatgtccagcagtggactgcaacgggctgatgtatatgatgaaaaACTTATTGGcccagagtcaggaatttgtaccccatatggtgataggctcgccacctatcacattgtgggacggaacatacaaagcgaaatgtgggtgtcctgggacctctgcctaccccttctggaatataggcGCGGGCTGATGTTCGGCCTGCACCATCAGGAGGCGGCTGGCGGTCTCCACGCACAGCCGCGAGGGCCGGTCACATCCCTCAAGGAAGAACCGCTCACCAGGGCTTGGATGACGCCGAGCTCGCTAGTTGACAATACCAATAGCGTGGGTGTCGGCCGGGCTCACTTCGAGAAGCAACCGCCGAGCAACCTACGCAAAAGCAATTTCTTCCACTTCGTAGTGGCGCTGTACGACCGCGCCGGCCAGCCTGTCGAGATCGAAAGAACCGCCTTCATCGGCTTCATCGAAAAAGATCAGGAACCTGAAGGTCAGAAGACAAATAATGGCATCCAATATAGACTGCAGTTACTTTATGCAAATGGTATTCGACAAGAACAGGATATATTCGTCAGACTCATCGACTCGGTGACAAAACAGCCCATCGTGTACGAAGGTCAAGACAAGAATCCAGAAATGTGTCGAGTTCTATTAACACATGAAGTTATGTGCAGCCGGTGTTGTGACAAGAAGAGTTGTGGTAACAGAAACGAAACTCCATCAGATCCTGTTATTATCGATCGTTTTTTTCTCAAGTTCTTCCTGAAGTGCAATCAGAATTGTTTGAAGAATGCAGGCAACCCGCGGGATATGAGAAGGTTTCAAGTGGTAATATCAACGCAAGTGATGGTCGACGGTCCTCTACTAGCAATATCAGACAATATGTTCGTCCACAATAACAGCAAACACGGCCGTCGGGCAAAACGCCTAGACCCAACTGAAGGTATTGAGGCAGCGCCAGAAAACACTTCCGGGTTATATCCACCGCTGCCGGTAGCGACGCCGTGCATCAAGGCGATATCCCCTAGTGAAGGCTGGACGTCTGGCGGGTCCACAGTCATCATAGTAGGAGATAACTTCTTCGATGGTCTGCAAGTCGTGTTCGGGACCATGTTGGTTTGGAGCGAGTTAATAACATCGCACGCTATCCGAGTTCAAACCCCGCCACGACACATACCTGGCGTAGTAGAAGTAACTTTATCATATAAAAGCAAGCAGTTCTGCAAAGGAGCGCCCGGGAGATTCGTTTATGTTTCAGCACTCAACGAGCCTACGATAGATTACGGCTTTCAAAGACTGCAGAAACTTATCCCGAGGCATCCTGGTGATCCGGAAAAACTACCAAAGGAAATAATCTTGAAACGAGCAGCAGATCTAGCAGAGGCGTTGTATTCAATGCCGCGGAACAACCAACTAGGCCTGGGCGCTCCTCGCTCTCCGCCAGCTAGTATGCCCTTCAACTCGTACACGGGACAGCTGGCAGTCAGCGTGCAGGACACCGCCGCCTCGCAGTGGACTGAAGAAGAGTACGCGCGCAGCGGCGGCGGCGGCTCGGTGTCGCCGCGGTACTGCTCGGCGGcgagcacgccgcacgcgcatgcgccgcccgcctcctacccgcacccgcaGCACTACCCCGCGCCGCCCACTTCACTCTTCAACACCACTTCCCGAATGGGAGGTCTAGTCTCGTCTCCGTTCAGCGTGAATCCGTTCTCGCTGCCGACGTGCAGCGCGCAGCAGTACGCGCAAACCGCGCCGCTCGCCTCCAAGTAG
Protein Sequence
MGNLIIYKKGPEHDGPKVDGSGDMALNAFSKMAALADAIFVLIFKLYDKWTLRYKAFCAGSIITEIRVLTSANCFLTNRKRFKLNIRHIRAVAGIVHTYAIEPLVDKGPQQWRTVHHIYSQKFFRFPAYDLAILELSQPYTFNQFVNKINYATLNQDFDGVCMSTGFRSVKSWSTNKYVYIEDVKLLKRSLCEMKLLRCCQLYHCTSHDPYYWRADREIQGGGLVCFGTGDPAETDENQGLLVGVTSLINVGLPNLHTRVGMFNNRNTSSKPLFRNAVQKPCDKGRKSSGCNPLPFSGPGAQSQEFVPDMAIGSPPITLWDGTYRARCGCPGTSAYPFWDIGGFVGKRSVGRLLARWQDNYTREPAVMYSINQQTELCGISWERPMSSSGLQRADVYDEKLIGPESGICTPYGDRLATYHIVGRNIQSEMWVSWDLCLPLLEYRRGLMFGLHHQEAAGGLHAQPRGPVTSLKEEPLTRAWMTPSSLVDNTNSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEPEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQPIVYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIEAAPENTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGGGSVSPRYCSAASTPHAHAPPASYPHPQHYPAPPTSLFNTTSRMGGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-