Basic Information

Insect: Hyles lineata
Gene Symbol: -
Assembly: GCA_030180105.1
Location: JARJEE010000025.1:931279-933031[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.21 15 6.8 3.9 1 23 57 79 57 79 0.95

2 10 0.0069 0.5 11.5 0.0 1 23 85 107 85 107 0.97

3 10 0.0062 0.44 11.7 3.4 1 23 119 141 119 141 0.98

4 10 0.0016 0.11 13.5 2.9 1 23 147 169 147 169 0.99

5 10 0.024 1.7 9.8 3.3 1 23 176 199 176 200 0.96

6 10 1.1 83 4.5 0.1 3 21 209 227 208 228 0.92

7 10 0.14 10 7.4 4.1 1 23 369 391 369 392 0.96

8 10 6.3e-05 0.0045 17.9 1.9 1 22 399 420 399 420 0.96

9 10 0.12 8.5 7.6 7.5 1 23 452 475 452 475 0.96

10 10 0.00073 0.052 14.6 5.5 1 23 508 530 508 531 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.21	15	6.8	3.9	1	23	57	79	57	79	0.95
2	10	0.0069	0.5	11.5	0.0	1	23	85	107	85	107	0.97
3	10	0.0062	0.44	11.7	3.4	1	23	119	141	119	141	0.98
4	10	0.0016	0.11	13.5	2.9	1	23	147	169	147	169	0.99
5	10	0.024	1.7	9.8	3.3	1	23	176	199	176	200	0.96
6	10	1.1	83	4.5	0.1	3	21	209	227	208	228	0.92
7	10	0.14	10	7.4	4.1	1	23	369	391	369	392	0.96
8	10	6.3e-05	0.0045	17.9	1.9	1	22	399	420	399	420	0.96
9	10	0.12	8.5	7.6	7.5	1	23	452	475	452	475	0.96
10	10	0.00073	0.052	14.6	5.5	1	23	508	530	508	531	0.96

Sequence Information

Coding Sequence: ATGGAGCCCGATGATGAGGATAGTGAAGGCATCCAGAACATGTTTGCCAGTGTGTGGGTCAAGGTGGAGGTGAATGATGACAAGGAAGAAGAATCTGACCATCTAGTTATTGATGCTGAGGATATGGAGCAATCCCAAAACAATTCTGGCATTCAACACTGCAAAAAGTTTTATTGCGATCAGTGTGAATACACAACTTCATTCAAAACGTGTATGAAGCGGCATGCGCTGGGTCATCTGAACATCAAGCCCTATGCTTGTAGCCAGTGTCCCTACGCTGCCATGTACCCGGGGGCGCTACAACGACACATAATCAAGCACCAGATAGACAACGGAGACGAGAGAGCAATAAAATACTTCTGTGACAGTTGTGAATACAGCACATATTACAAATACAGTCTCAGGGCACACAAACGAAAACACAGTCTGGAGAAGATGTATAAGTGCTTCCAATGCACATATTCAACAGCTTACAGAGGAAGCTTTGTGAAACACCAGAGAATGCACAAAAACGAGCCGAAGCAGTACAAATGTGAGAAGTGTCCTTTCGTAACGAAGTATCCAGGACACATTTATAGGCATCGGGCCAAAATACACCATTTGGTGACTGGAGATGCTAAAGCTTGCAGTTACTGCGATTTTTCTACTGTGCTTAGGTGGAGGTTGAACCAACACGTAATGAGGAGTAAGCAGGATCAGTTGTTACAGTGTCGACAATGTAATTTTGAAACATACTACATGTGCCAAATTAGGAAACATAAGAGTGAACATCAAAAAGCGTACAGGCTAACTATAGAAAATGGTGGTAAAAAAGTTACAGAGATACAGAACGAGAATGAAGTTACTGAAGTAAATGAGAACCCTATTGAACAGAATGCAGATAATATAGAAGCAGAGAAAATAGCTAATTTAACCACAGACATAATACAACTTATAAATAATGCGACTTCAgttgcaaatacaaataaaatcacaaattcATCAGATACAAATATACCCAAAGTAAATGATGAAAATGAGACAAATGACAATGTATCTGAAATGGAAGGTGTGATAGACACGAAAAGCATAAAAGTACTACAATCAGGCGATAGCTCCAAGCCATTCCAGTGCAGTAAATGTTCATACTCCTCAAGACTAAAGGCTCCAGTACAAAGGCACTTCCGGAGACACCACACAAGTCACAACCGACCGTACAAGTGCACAAATTGCGATTTTTCcacaaaaacaaaagataatttGCAACTTCACACAAGAAGGAGTAAATCAGAGATCTTACTTGACTGTAATTCTTGTACATTTTCAACGCAATTCAAATGTACCCTGGTTATGCATCAGAAAGAACATTATGCCCATAAATGTACTCTTTGCAGTTATTCATGTAGGAACAGACATGATATTCAAAGGCATTTTAATGTTGTGCATCTTGACGGTGGAACGAAATGCAGGTTTTGTAATTTCAAATCGGGGAGGAAGGAGAGTGTATTGTGCCATGAGACAATACACACCGGAGAGAAGCCGTTTAAATGTAAATTCTGTGATTATAAAACAGTTAGGAATTCACTTTTGACGATACATTTTAGGAAGCATCATGAAGGCATGGAATGTTTTTGA
Protein Sequence: MEPDDEDSEGIQNMFASVWVKVEVNDDKEEESDHLVIDAEDMEQSQNNSGIQHCKKFYCDQCEYTTSFKTCMKRHALGHLNIKPYACSQCPYAAMYPGALQRHIIKHQIDNGDERAIKYFCDSCEYSTYYKYSLRAHKRKHSLEKMYKCFQCTYSTAYRGSFVKHQRMHKNEPKQYKCEKCPFVTKYPGHIYRHRAKIHHLVTGDAKACSYCDFSTVLRWRLNQHVMRSKQDQLLQCRQCNFETYYMCQIRKHKSEHQKAYRLTIENGGKKVTEIQNENEVTEVNENPIEQNADNIEAEKIANLTTDIIQLINNATSVANTNKITNSSDTNIPKVNDENETNDNVSEMEGVIDTKSIKVLQSGDSSKPFQCSKCSYSSRLKAPVQRHFRRHHTSHNRPYKCTNCDFSTKTKDNLQLHTRRSKSEILLDCNSCTFSTQFKCTLVMHQKEHYAHKCTLCSYSCRNRHDIQRHFNVVHLDGGTKCRFCNFKSGRKESVLCHETIHTGEKPFKCKFCDYKTVRNSLLTIHFRKHHEGMECF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00429513;
90% Identity: -
80% Identity: -