Basic Information

Insect: Hyles lineata
Gene Symbol: -
Assembly: GCA_030180105.1
Location: JARJEE010000007.1:1741621-1761746[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.17 12 7.2 0.1 2 23 469 490 468 490 0.93

2 15 0.045 3.2 9.0 0.0 1 23 500 523 500 523 0.93

3 15 0.2 14 6.9 0.9 2 21 607 626 607 627 0.94

4 15 0.026 1.9 9.7 1.6 2 23 690 711 689 711 0.95

5 15 0.001 0.073 14.1 2.7 2 23 754 777 753 777 0.96

6 15 0.097 7 7.9 0.2 1 23 783 805 783 805 0.93

7 15 0.0047 0.34 12.0 2.9 1 23 811 833 811 833 0.98

8 15 0.14 10 7.4 0.3 2 23 1124 1145 1123 1145 0.94

9 15 0.065 4.7 8.4 0.3 1 23 1223 1245 1223 1245 0.96

10 15 0.018 1.3 10.2 3.9 1 23 1252 1274 1252 1274 0.98

11 15 0.0019 0.14 13.3 1.8 1 23 1310 1333 1310 1333 0.95

12 15 0.031 2.2 9.5 0.8 1 23 1340 1363 1340 1363 0.96

13 15 0.0072 0.52 11.5 0.2 2 23 1386 1408 1385 1408 0.96

14 15 0.0072 0.52 11.4 1.9 1 23 1418 1440 1418 1440 0.97

15 15 0.0048 0.34 12.0 2.1 3 23 1460 1480 1460 1481 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.17	12	7.2	0.1	2	23	469	490	468	490	0.93
2	15	0.045	3.2	9.0	0.0	1	23	500	523	500	523	0.93
3	15	0.2	14	6.9	0.9	2	21	607	626	607	627	0.94
4	15	0.026	1.9	9.7	1.6	2	23	690	711	689	711	0.95
5	15	0.001	0.073	14.1	2.7	2	23	754	777	753	777	0.96
6	15	0.097	7	7.9	0.2	1	23	783	805	783	805	0.93
7	15	0.0047	0.34	12.0	2.9	1	23	811	833	811	833	0.98
8	15	0.14	10	7.4	0.3	2	23	1124	1145	1123	1145	0.94
9	15	0.065	4.7	8.4	0.3	1	23	1223	1245	1223	1245	0.96
10	15	0.018	1.3	10.2	3.9	1	23	1252	1274	1252	1274	0.98
11	15	0.0019	0.14	13.3	1.8	1	23	1310	1333	1310	1333	0.95
12	15	0.031	2.2	9.5	0.8	1	23	1340	1363	1340	1363	0.96
13	15	0.0072	0.52	11.5	0.2	2	23	1386	1408	1385	1408	0.96
14	15	0.0072	0.52	11.4	1.9	1	23	1418	1440	1418	1440	0.97
15	15	0.0048	0.34	12.0	2.1	3	23	1460	1480	1460	1481	0.95

Sequence Information

Coding Sequence: ATGATGGCCACTCAACAACCACTGATTCTTTGTTTGGACAACTCCTTGGGCGAGGAAGTGGCTTTAAGGGTTGAACCAGAAGAAGACTTCCAAACTTTCTTGGATAAAGCCAGATCACTTCTAGGCTATGAAGTTGATATCAACCTTATAACTGGGAACCAACAGGTATCACTTGATGAAAACATGTACCAATTTCTTCTAAATGCGGAGCAGCATATGCAAAACACGCAATTCGATCAAATGTTAGAGCCAAATCCTGATTCACTTTATGTCTTAGATGATGGAACTCAGATCAGGGCTTCTCAAATACATTTCGATAATGATGACCCACCAGTCGACTTTGCCGTTGGGAGTATGCCATTTGTAAAATACAggcatgatgatgatgaactggATCAAGAAGACATTGAGGTAGAAAAAACAGTCGATTACAACATCATGGAAAGCCCTGTTGCTAAATGGTCGAGTCATAGCTCAAGTCCGAAAAACTTCGGCAATAGTCTCCCTTTTAAGTTGGTTTGTTCAAATGCCACTGCCTTCGAAAGCCAATTTACTAAGTATCTGGAATCTAAAACGTATGCAGCCCTAGATAATGTTACTAATAGGAACAAGTCGCCTAGGAGCTTAATTCGTGATAACTTTTCTAAATACGATGATAACTATCAACGTAAAAGCGATAATTTCAGTTGTACTAGAGAAGAgattctaaatatgtttaaagatTCGCCGGTGAACTCTTTGCCATACGAAGGTTACACCGAACGGAGGCATGTACGAAAAAGCGATCCGTCTCGAATACACAAGAGCTTCAGGCCTCTATCTGCGGAGTTGGATGGCGTGTTAATCAGCGAGAATGGAAACCAAACCTGCTTTATATGTGATAAAAAAGTTGAGAGGGAGAAAATATACCTATTTGACAACGAAGATCAGAAGATCCATAGAAAATCACCTCAGAAGAAAACGGAGACGCAGTTGAAAATCATTTGCGAAAAATGCTTGAATGAAAACTTTGCACCGTGTTCAATGAAAGGAGCGAATCAATTTTTGAACCCAGACGAGTATTTGGTGATAAGAAACAACCAGCAATacatatttaagaaaataaagaatatcaaTTTTAAGATTTCGAATAGTCGCGGGAAGAGGAACGATAGTATGAATACAATATCCGAAGAATTTGTAAAAGTTGAAATAGGTTCTGATGGTGAGATCATAACGAAGCCGATTGACGAGAAGTCCGATGATGTAATAGTAGTTAAAGACAAAGATAGTTCGAGCGATGTGGAAATCATTGAACCGGAAACGGAAATAGATaagattattgacaatatagaaGATGCTGATGAGGAAGTAAAAGAGTTTTTGGGAAAATATCAATGTGATGGCAGCAATGAAGAGGAGCTTAAGTGCCGATTTTGTGAGAAAGTATTCGCGAACATAACAGAGGTGACAGAACATGGAGAAGTACATAAACACGAAGTCGACGATGAGAACCTGTTTCCTTGTCCGCTTTGTAACTATGGTTACGCCAATTTCAAATGGTTAAAAGGGCATCTGATTGCGGCCCACGAAAAGAAAGACTCAAGTGATGTGAAAAAAGAAATCACTGATGCGTCCGAGACGGGAACAAACGAAGTTCAAGAACAAGACAAAATTGAAATCAAATGCGAAGTAGTTGATGAAGAGAACCCTCAAAGCAGCGAAGATGAAATATGGATCGTCCAGACTGCTGACGTGGAGCCGACGGGCCAGCTGCAAAAATTACTTGATGCTGCTAAGggCGTTGAGAGTAAAGGGAGTGTCACTAAGAAGACGCCAAAATGTCTAAATTGCAGTCAAACGTTTCCTTCATTGGAGGCGTTGGCGACGCACCGATGTCGTCGACGCGGCAGGAAGCGCAAGACCGTCGGAAACGACGCCACTATTTGCGTGCCCACTCAGGAAGACTTCATTaagAGAGCACAAGGAAGACCTAGACAAACAGATGTAACAAGTGGTGATAGTTTACTGGTACCgAAGACTCGAAAGAAAAAGTCCAAGGAACCGTCATCAGATCCCCAAATAGTGACGTGCGACAATTGCAACGAGTCTTTCACGTCTAAAGTTAGACTCAAGTTCCATATGCAGTTCCACGAGTCCACACAGATGCTGACGCCAGAAGGTAAGTTCTCGTGCGTGGATTGCGAAGACGCCACCTTCGACACGGAGACGGCGCTGTTCGACCACGTGCACTTTCAGCATGACAAGCAGAAGCGCTGGCAGTGTCCCGTGCATGGCTGCGGGAAGACCTTCCATTTGCGTGCGACGCTAACGAAGCACAGTCGCACGCACACGGACACGCGTCGCTACGTGTGCGTCACGTGCGGGAAGCGGTTCCTCGACAAACAGACGCTGGACGAGCATGGCGTCACACATTTACAGATAAAGCCGTTCCAGTGCCACATCTGCCTGAAGCAGCTGACGCGTCGCTCGCGGCTGCGCATGCACGTGCGCGCGCACGAGGAGGAGCTGGCGCCGCGACGAGTGCTCGTGTGCGCCGTGTGCGCGCGCGCCTTCCGCGACCAGCGGCACGCGCAGCTGACGCGTCGCTCGCGGCTGCGCATGCACGTGCGCGCGCACGAGGAGGAGCTGGCGCCGCGACGAGTGCTCGTGTGCGCCGTGTGCGCGCGCGCCTTCCGCGACCAGCGGCACGCGCAGCTGACGCGTCGCTCGCGGCTGCGCATGCACGTGCGCGCGCACGAGGAGGAGCTGGCGCCGCGACGAGTGCTCGTGTGCGCCGTGTGCGCGCGCGCCTTCCGCGACCAGCGGCACGCGCAGCTGACGCGTCGCTCGCGGCTGCGCATGCACGTGCGCGCGCACGAGGAGGAGCTGGCGCCGCGACGAGTGCTCGTGTGCGCCGTGTGCGCGCGCGCCTTCCGCGACCAGCGGCACGCGCAGCTGACGCGTCGCTCGCGGCTGCGCATGCACGTGCGCGCGCACGAGGAGGAGCTGGCGCCGCGACGAGTGCTCGTGTGCGCCGTGTGCGCGCGCGCCTTCCGCGACCAGCGGCACGCGCAGCTGACGCGTCGCTCGCGGCTGCGCATGCACGTGCGCGCGCACGAGGAGGAGCTGGCGCCGCGACGAGTGCTCGTGTGCGCCGTGTGCGCGCGCGCCTTCCGCGACCAGCGGCACGCGCAGCTGACGCGTCGCTCGCGGCTGCGCATGCACGTGCGCGCGCACGAGGAGGAGCTGGCGCCGCGACGAGTGCTCGTGTGCGCCGTGTGCGCGCGCGCCTTCCGCGACCAGCGGCACGCGCAGCTGACGCGTCGCTCGCGGCTGCGCATGCACGTGCGCGCGCACGAGGAGGAGCTGGCGCCGCGACGAGTGCTCGTGTGCGCCGTGTGCGCGCGCGCCTTCCGCGACCAGCGGCACGCGCAGGAGCACGCGACGAAACACCCCGAGTGTATAGAGACGTTCGCCAACGAGCTGAAGGTGGAGGCGGACGAGGCGGCCGTGCAGCTCTCGCCCACCAGTGGGATCGTACGCCACACCGTGCAGATACTCGAATCTCCAAAACTATCCAAGCCAATACCGAGGCAAGTAGACAGTCCACTGGCCGCGCCACTACTGGCGCAAGTTGCGGACGAAGCGAGGTCGATCATACGCGTTGTAGAAATTGAAAAGGCTTTTAGATGCGAATATTGCGAAGACGTTTTTTACTTGGAGGACAGTCTGAACAACCACCGCGTCATTCACAAGGGCGTCAGGAATCCCTTTACGTGTCACATATGTAAAGTGAGCTTCGCCACTTATTCCAGAGTAACAACGCACAAGACGACGCACGGGTTCTACAAGCGCTCGCTGGCGTCGACGCGGCCCGCCCCCGGCCAGGCGGGACCCGCCGCCGCCGGCATCCTCGGATACGGAGACTTCCCCGTCGTCAAGCACTTCCTGTGCGAGGACTGCGGCAGATCATACCTCCACTGGACATATCTGCAAGTACACAGGCGGATGAAACACGCCAATGAAAACTATACGTATGCGTGTAACCAATGCGAGCTGACCTTTCCAAACAGTTGGAGCGTCGGCCACCACCGTAAGAAGGTGCACGGCAAGTCAGCATCTGACGACCCTCCAGCAACTGCATCCAAAGAGCCGAGAACAAACTACAGAATCCCATGTCGAGATTGCGACGAGGTCCTGCCGAGTAAGACCGCGTTGTATAAACACAGGAAGAAGGAACACACCAATATATCCTGTAGACCagGCGTGTTCTGCTGCGGCACGTGCGGCAAGCAGTACAGCAGCCGCGCGGGACTCGACGCGCATGCGCACACGCACGCCTACCAACAACCCAACACCGCGCACAAACAACTCAGAGGCACACGTGCGTGGTGGTGCGCGCGCTGCGGGCAGCGGTTCCGCGCACGCACCGAGCTGCGCGCGCACGTGCGCCGACACCACGCGCAGCTGCTCACCGTCATAGAGATTGAAGGTTTAAATCATACTCGGGAGGAAATCATGAAGATATTATCAGATCATAATATATCTCATGATCGAGTTGTTGAAATTACGAAAATGTCTTTTGCACAGGGCACGTCAAGTATTATTCCTGATAGTACCCGCGCATTATCTTTGCTGAGTGACGTCCCAAGAACTCAGATTTCCTGTGTGAAACCAACTGATTGTATCGTAGACGACTTCCAATCGCTTCATCGTAATCGCGTCCTGAGCAAAAGCGGACGTAGACCAAAAATACTACAACGCGGCGCCGAAGACAGAACTCAAGCCGACTGCAACAACTACCCGCTCGCTGTCAGCGTCAATGGCGAGGAATTATCGGATTTGAATGTGCAACTACTGCTTCGCGATGGCGTTTTGGTTGACGGCAACCAGATGGTACAACTGCAGTTAAACGACTCCATGTTACTAgaataa
Protein Sequence: MMATQQPLILCLDNSLGEEVALRVEPEEDFQTFLDKARSLLGYEVDINLITGNQQVSLDENMYQFLLNAEQHMQNTQFDQMLEPNPDSLYVLDDGTQIRASQIHFDNDDPPVDFAVGSMPFVKYRHDDDELDQEDIEVEKTVDYNIMESPVAKWSSHSSSPKNFGNSLPFKLVCSNATAFESQFTKYLESKTYAALDNVTNRNKSPRSLIRDNFSKYDDNYQRKSDNFSCTREEILNMFKDSPVNSLPYEGYTERRHVRKSDPSRIHKSFRPLSAELDGVLISENGNQTCFICDKKVEREKIYLFDNEDQKIHRKSPQKKTETQLKIICEKCLNENFAPCSMKGANQFLNPDEYLVIRNNQQYIFKKIKNINFKISNSRGKRNDSMNTISEEFVKVEIGSDGEIITKPIDEKSDDVIVVKDKDSSSDVEIIEPETEIDKIIDNIEDADEEVKEFLGKYQCDGSNEEELKCRFCEKVFANITEVTEHGEVHKHEVDDENLFPCPLCNYGYANFKWLKGHLIAAHEKKDSSDVKKEITDASETGTNEVQEQDKIEIKCEVVDEENPQSSEDEIWIVQTADVEPTGQLQKLLDAAKGVESKGSVTKKTPKCLNCSQTFPSLEALATHRCRRRGRKRKTVGNDATICVPTQEDFIKRAQGRPRQTDVTSGDSLLVPKTRKKKSKEPSSDPQIVTCDNCNESFTSKVRLKFHMQFHESTQMLTPEGKFSCVDCEDATFDTETALFDHVHFQHDKQKRWQCPVHGCGKTFHLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELAPRRVLVCAVCARAFRDQRHAQLTRRSRLRMHVRAHEEELAPRRVLVCAVCARAFRDQRHAQLTRRSRLRMHVRAHEEELAPRRVLVCAVCARAFRDQRHAQLTRRSRLRMHVRAHEEELAPRRVLVCAVCARAFRDQRHAQLTRRSRLRMHVRAHEEELAPRRVLVCAVCARAFRDQRHAQLTRRSRLRMHVRAHEEELAPRRVLVCAVCARAFRDQRHAQLTRRSRLRMHVRAHEEELAPRRVLVCAVCARAFRDQRHAQLTRRSRLRMHVRAHEEELAPRRVLVCAVCARAFRDQRHAQEHATKHPECIETFANELKVEADEAAVQLSPTSGIVRHTVQILESPKLSKPIPRQVDSPLAAPLLAQVADEARSIIRVVEIEKAFRCEYCEDVFYLEDSLNNHRVIHKGVRNPFTCHICKVSFATYSRVTTHKTTHGFYKRSLASTRPAPGQAGPAAAGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENYTYACNQCELTFPNSWSVGHHRKKVHGKSASDDPPATASKEPRTNYRIPCRDCDEVLPSKTALYKHRKKEHTNISCRPGVFCCGTCGKQYSSRAGLDAHAHTHAYQQPNTAHKQLRGTRAWWCARCGQRFRARTELRAHVRRHHAQLLTVIEIEGLNHTREEIMKILSDHNISHDRVVEITKMSFAQGTSSIIPDSTRALSLLSDVPRTQISCVKPTDCIVDDFQSLHRNRVLSKSGRRPKILQRGAEDRTQADCNNYPLAVSVNGEELSDLNVQLLLRDGVLVDGNQMVQLQLNDSMLLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -