Basic Information

Insect: Hyles lineata
Gene Symbol: -
Assembly: GCA_030180105.1
Location: JARJEE010000002.1:19366892-19367956[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 4 2.9e+02 2.8 0.7 2 23 86 109 85 109 0.82

2 9 3.9 2.8e+02 2.8 2.6 2 23 131 153 130 153 0.95

3 9 0.00015 0.011 16.7 1.2 1 23 158 181 158 181 0.95

4 9 0.028 2 9.6 3.3 1 23 184 207 184 207 0.95

5 9 0.0013 0.095 13.8 1.0 1 23 213 236 213 236 0.95

6 9 0.0012 0.087 13.9 0.4 2 23 244 266 243 266 0.96

7 9 0.24 17 6.6 0.6 1 23 271 293 271 293 0.96

8 9 7.5e-08 5.4e-06 27.1 0.5 1 23 299 321 299 321 0.98

9 9 0.14 9.9 7.4 2.0 2 22 328 348 328 350 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	4	2.9e+02	2.8	0.7	2	23	86	109	85	109	0.82
2	9	3.9	2.8e+02	2.8	2.6	2	23	131	153	130	153	0.95
3	9	0.00015	0.011	16.7	1.2	1	23	158	181	158	181	0.95
4	9	0.028	2	9.6	3.3	1	23	184	207	184	207	0.95
5	9	0.0013	0.095	13.8	1.0	1	23	213	236	213	236	0.95
6	9	0.0012	0.087	13.9	0.4	2	23	244	266	243	266	0.96
7	9	0.24	17	6.6	0.6	1	23	271	293	271	293	0.96
8	9	7.5e-08	5.4e-06	27.1	0.5	1	23	299	321	299	321	0.98
9	9	0.14	9.9	7.4	2.0	2	22	328	348	328	350	0.88

Sequence Information

Coding Sequence: ATGCAGGAGACATACTTGGAACGGCTTTCGAATACGCGGAGAAACATCCTCGTTGTCCTGCGCTATGGTAATGTGATCCCTTTCAACTGGAATACGAAAGGATTTAGATGCTTTTACTGCTCCAAACTGATGAAAGATTGTGACATTCTCAAAAAACATACTATTTTGAGACACGCAGAAGTTGATTTAGAAGAATTTATACCAAAGAGAATTATTTCTAAGGATGTTCCTGTAAAGATTGACGTAGGCCAACTCAGTTGCAAATATTGTCCCGATTCGCCTATAAGTACCCTCGAACAATTAATTgatcatttaaaaattgaacATGGAGAAGGTTTTGATTCGACCGAAGTGTGCTTCTTCCCTTTTGTTTTGAATCAAGAATTGATGCGCTGCGTTATTTGTGACAGTGAATACCATAATTTTTCATGCATCATCAGCCACATGTACAAAGAGCATATAGACCATTCGTATATCTGCCAAATCTGCGGACTGAGTTTCATGAATCATGTTCGTTTGAAACGACACATAAGCAACAGTCACGTGGGGCACAGATGCTCCATCTGCGCCAAGATATTCAACGCCACACACAAATTGGAGAAACACAAGGAAAGAATACACGGGTTGTTGAAAATCCACGAATGCAATTTGTGCAGCGCCACTTTCGAGAATCAGTATAAAGTAAAAGTGCACATGGGGAAGATTCataatgttgaaaaatataGGATCAAATGTGAATACTGTCCTAAAATTTGCACGACTAGAGGTGCAATGGCGTTACATGTGCAGTCTTTGCACTCTAAGCTTAGATACGAATGTGATCTGTGTGATTACAAAACAGGCATCAAATGGATGATCAAACTCCATAAACGCAAGCATTTCGGCGACAAAGATTACTTTTGCAGCATCTGCGATAGAGGTTTTGGCCGGTCTAGTAACCTCAGGGCTCACATGAAAGTTCACACCGGAGCATCAGGTCGCGTGTGTAGATTTTGTCGGAAAGGATTTGTTAATTTGGAATGTCTAAAAGAACATGAATATGAGTTTCATAAATTTGATAATTAG
Protein Sequence: MQETYLERLSNTRRNILVVLRYGNVIPFNWNTKGFRCFYCSKLMKDCDILKKHTILRHAEVDLEEFIPKRIISKDVPVKIDVGQLSCKYCPDSPISTLEQLIDHLKIEHGEGFDSTEVCFFPFVLNQELMRCVICDSEYHNFSCIISHMYKEHIDHSYICQICGLSFMNHVRLKRHISNSHVGHRCSICAKIFNATHKLEKHKERIHGLLKIHECNLCSATFENQYKVKVHMGKIHNVEKYRIKCEYCPKICTTRGAMALHVQSLHSKLRYECDLCDYKTGIKWMIKLHKRKHFGDKDYFCSICDRGFGRSSNLRAHMKVHTGASGRVCRFCRKGFVNLECLKEHEYEFHKFDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00063980;
90% Identity: iTF_00428591;
80% Identity: -