Basic Information

Insect: Hyles lineata
Gene Symbol: -
Assembly: GCA_030180105.1
Location: JARJEE010000021.1:9384688-9388673[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0038 0.27 12.3 2.8 2 23 34 55 33 55 0.96

2 13 0.0006 0.043 14.8 0.6 1 23 93 116 93 116 0.92

3 13 0.00013 0.0096 16.9 0.7 1 23 118 140 118 140 0.97

4 13 2.2 1.5e+02 3.7 0.5 1 9 149 157 149 171 0.78

5 13 0.053 3.8 8.7 0.0 1 23 176 198 176 198 0.97

6 13 7.8e-06 0.00056 20.8 0.1 1 23 285 308 285 308 0.92

7 13 0.0015 0.11 13.6 0.2 1 23 331 354 331 354 0.95

8 13 0.00076 0.054 14.5 0.4 3 23 361 383 360 383 0.95

9 13 5.6 4e+02 2.4 0.1 3 23 390 410 389 410 0.90

10 13 0.13 9.3 7.5 0.1 1 20 415 434 415 437 0.94

11 13 0.005 0.36 12.0 0.1 1 23 443 465 443 465 0.97

12 13 1e-05 0.00071 20.5 2.7 1 23 471 493 471 493 0.98

13 13 3.4e-06 0.00024 21.9 0.3 1 23 499 522 499 522 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0038	0.27	12.3	2.8	2	23	34	55	33	55	0.96
2	13	0.0006	0.043	14.8	0.6	1	23	93	116	93	116	0.92
3	13	0.00013	0.0096	16.9	0.7	1	23	118	140	118	140	0.97
4	13	2.2	1.5e+02	3.7	0.5	1	9	149	157	149	171	0.78
5	13	0.053	3.8	8.7	0.0	1	23	176	198	176	198	0.97
6	13	7.8e-06	0.00056	20.8	0.1	1	23	285	308	285	308	0.92
7	13	0.0015	0.11	13.6	0.2	1	23	331	354	331	354	0.95
8	13	0.00076	0.054	14.5	0.4	3	23	361	383	360	383	0.95
9	13	5.6	4e+02	2.4	0.1	3	23	390	410	389	410	0.90
10	13	0.13	9.3	7.5	0.1	1	20	415	434	415	437	0.94
11	13	0.005	0.36	12.0	0.1	1	23	443	465	443	465	0.97
12	13	1e-05	0.00071	20.5	2.7	1	23	471	493	471	493	0.98
13	13	3.4e-06	0.00024	21.9	0.3	1	23	499	522	499	522	0.98

Sequence Information

Coding Sequence: ATGGCTTCCACATTACAAACGGCAACAAACGAGGCGGTGGATCTGGATCAGATATGCTTACTCCCGAAGCCGACCACGATAGATTTGATTGGCGGCATATATTGCCACATCTGCGAGTTCACATTCGACACTAAGAAGGACTACGACAGTCACTACAGGCAGCACAATACCGGCGCGCAGGACATCGTCTACACCTGCGTGGTGTGCCGCAAGCAGATCACGGGCTACCCCAGCTTCCGCGGCCACTGTTACCTCAAACATGTTGCTAAGGATAAGTTCAAatGTGAATATTGCTCcaaaatgtattcaaaattgTCAGTACTGAAACAACATGTGGCTGCCATGCACACATTCAATTGCACAACATGCAACCAACAATTCCCAACAAAAAATGAGCTACAATTGCACCAGATTGTCCATAAGTTTCCTAAGTCGAAGCAGCCGTTCCAATGTAGTGACTGTGGCCAGAACATCGACACTGTAGACATGTGTGAACTGCATGTGGAGGAGCATAGCACAACCCAGTACCCATGTTCCATCTGCGAAGAAACATCGCCCAACAAGCCGGATGCAATACAACATTTGACGAAACATTTTGGCGACGTACTTACCAAATCCGAAATTAACGAAGAAACAAAACCATTGAACGAAGATTCGTCCATAGACGTGATCGGTGGCATTCTGTGCTGCTTCTGCAATGAATTGTTTAAAAACAGAATAGATTTCGACCTGCACTTTGTGACCGAGCATGGAGACAAAACTCTGGTCTACACATGCATCATTTGTATGAAGCAATACGAAAAGTATGGCCTGTTTGGTAATCACTGCTATTTCCACATATCCAAGGACAGATATGAGTGCGACGAGTGCGGCAAGACATTCCCGCGGCTGTCGCTGCTGGTGGTGCACACGGAGGCGTTCCACCCGGGCTCGGAGGGGGGCGCGGGTGTGGGTGGTGCGGGCGGTGCGGAGGGCGCGGGCGACAAGCCGTTCTCGTGCTCGGTGTGCGGGCACGCGTTCGCGTCGGCGCCGCGGCTGCACGCGCACTGGCGCGGCGCGCACGGGCTGGCGCGCGCCCCGTGCCCCGCGCGCGGCTGCTCGCGCTCCTTCTGCTCGCCGCGCGCGCTGCTGCTGCACCAGCGCGAGCAcgggccgcgccgcgccgcctgccgCCACTGCGGCCTGCGCCTGcccggccgcgccgccgccgcgcgccacCTCGACCTGCACCGCCTCAAGCGCTACGCCTGCCCCGTGTGCGCGCGCGCCTACCGCGAGAAGTACCTCGTGCTCAAGCACATCCCGCAGCACTTCGAGGTGGTGCTGCACGTGTGCGGCGTGTGCGGCAAGGCCTACGCGGCGCGCGCGCGACTCATCGAGCACGCCAAGACGCACTCCACGCTGCGCACGCACACCTGCTCCCACTGCGGCAAGGGCTTCATCAAATCCTATCAGCTGGAGGAGCATCTCAACATCCACACTGGCCGACGCCCCTACAAGTGCACCGGCTGCCCGAAATCCTTCGCCAACTACGCGAACTGGGCGAAACATCTGCAACGCATGCACAACATCGATCACAAACTCGTCAAGAAACAGTTGGCCGAGGCAAAAACGAAAAGCAACAGTGAACTGCAAAAAGACGGGCCGACGAATGAGGAACCGGTGAAGAGCGAGGGTACCAAAATGGAGCAATTGAATACGGAGAGTTTGGAGACGGAGTCGAGATGGTCGGAGGCGGCGGCGACGGCGCCGGGGGACTCGGACGACAGCACGGTGGACGGCATCGACCCGCGCATCATCGAGCGCGAGCTGCAGATGTTCTGCGACAACAACAACGCGCACCACTCCATCGACGACTTCGAATTCGTCGACATGCTGCCCGCAGAAACCACTGCGTTCACATCTGAGTCGCTTCCGTCTTGCGACGCGGCAGTGGTGCCGTTGGCGCCCGGAccggtggcggcggcggtggcggggGCTGCCGTGCCGCCCGAGTACGGGCCGGAGTTCGTGAACCAGGGCTACGCGGCTGCGCCCGGCGCCATCGACCTGGACGACCACATCATGCCGCACATCGACCCGCTGCTCACCATCAAGCCCGACACGTGGCAGTCGCTGTACCAACCCAACGTGGCGTACCCGGTCGCGTGCGCGCCGCTGTACCCGCCCGGCCCAGCCTTCGCGCTCGACGACTTCACCGACATCTTCTAG
Protein Sequence: MASTLQTATNEAVDLDQICLLPKPTTIDLIGGIYCHICEFTFDTKKDYDSHYRQHNTGAQDIVYTCVVCRKQITGYPSFRGHCYLKHVAKDKFKCEYCSKMYSKLSVLKQHVAAMHTFNCTTCNQQFPTKNELQLHQIVHKFPKSKQPFQCSDCGQNIDTVDMCELHVEEHSTTQYPCSICEETSPNKPDAIQHLTKHFGDVLTKSEINEETKPLNEDSSIDVIGGILCCFCNELFKNRIDFDLHFVTEHGDKTLVYTCIICMKQYEKYGLFGNHCYFHISKDRYECDECGKTFPRLSLLVVHTEAFHPGSEGGAGVGGAGGAEGAGDKPFSCSVCGHAFASAPRLHAHWRGAHGLARAPCPARGCSRSFCSPRALLLHQREHGPRRAACRHCGLRLPGRAAAARHLDLHRLKRYACPVCARAYREKYLVLKHIPQHFEVVLHVCGVCGKAYAARARLIEHAKTHSTLRTHTCSHCGKGFIKSYQLEEHLNIHTGRRPYKCTGCPKSFANYANWAKHLQRMHNIDHKLVKKQLAEAKTKSNSELQKDGPTNEEPVKSEGTKMEQLNTESLETESRWSEAAATAPGDSDDSTVDGIDPRIIERELQMFCDNNNAHHSIDDFEFVDMLPAETTAFTSESLPSCDAAVVPLAPGPVAAAVAGAAVPPEYGPEFVNQGYAAAPGAIDLDDHIMPHIDPLLTIKPDTWQSLYQPNVAYPVACAPLYPPGPAFALDDFTDIF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00820329;
90% Identity: iTF_00820329;
80% Identity: -