Basic Information

Insect: Hyles lineata
Gene Symbol: -
Assembly: GCA_030180105.1
Location: JARJEE010000027.1:4239689-4251789[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 6.1e-05 0.0044 18.0 7.9 1 23 190 212 190 212 0.98

2 13 2.7e-06 0.00019 22.3 0.2 3 23 226 246 225 246 0.98

3 13 5.7e-05 0.0041 18.1 2.1 2 23 255 276 255 276 0.98

4 13 0.00015 0.011 16.7 1.9 1 23 282 304 282 304 0.98

5 13 1.2e-05 0.00088 20.2 1.3 1 23 310 332 310 332 0.97

6 13 1.9e-05 0.0014 19.6 8.4 2 23 339 360 338 360 0.97

7 13 4.2e-05 0.003 18.5 0.8 1 23 366 388 366 388 0.97

8 13 8.7e-06 0.00063 20.6 1.2 1 23 394 416 394 416 0.99

9 13 0.00037 0.027 15.5 1.1 1 23 422 444 422 444 0.98

10 13 0.00072 0.052 14.6 1.3 1 23 450 472 450 472 0.97

11 13 1e-05 0.00074 20.4 0.5 1 23 478 500 478 500 0.98

12 13 8e-07 5.7e-05 23.9 1.2 1 23 506 528 506 528 0.99

13 13 0.00029 0.021 15.8 3.6 1 23 610 632 610 632 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	6.1e-05	0.0044	18.0	7.9	1	23	190	212	190	212	0.98
2	13	2.7e-06	0.00019	22.3	0.2	3	23	226	246	225	246	0.98
3	13	5.7e-05	0.0041	18.1	2.1	2	23	255	276	255	276	0.98
4	13	0.00015	0.011	16.7	1.9	1	23	282	304	282	304	0.98
5	13	1.2e-05	0.00088	20.2	1.3	1	23	310	332	310	332	0.97
6	13	1.9e-05	0.0014	19.6	8.4	2	23	339	360	338	360	0.97
7	13	4.2e-05	0.003	18.5	0.8	1	23	366	388	366	388	0.97
8	13	8.7e-06	0.00063	20.6	1.2	1	23	394	416	394	416	0.99
9	13	0.00037	0.027	15.5	1.1	1	23	422	444	422	444	0.98
10	13	0.00072	0.052	14.6	1.3	1	23	450	472	450	472	0.97
11	13	1e-05	0.00074	20.4	0.5	1	23	478	500	478	500	0.98
12	13	8e-07	5.7e-05	23.9	1.2	1	23	506	528	506	528	0.99
13	13	0.00029	0.021	15.8	3.6	1	23	610	632	610	632	0.99

Sequence Information

Coding Sequence: ATGGCTGCTGTCAATAAAACGCAGAATTTGAAGTTCGACAAGATATGTCGGGCTTGTTTGCAGATAAAAAAGGACATGAGACCCCTTTTCGAGCAGCTGACTGCCACTATGCTGATGGGGATATCAAAAGTTCAGGTGGCAGTAGGCGACGGTCTTCCACCGCAGCTGTGTCTGCAGTGCGTTCACCAGATTTCGCGCTGCCACGCCTTCAAAGAGCTGGTGGAACGCAATGACGTCACGCTGCGGGAACACGCCAAGTACCTCGCCGAAGAAGCTGTTAAACGGGAACGGGAGGAAAATGAGAAAATTTTGTCGATCGGGGACTCGACGTACTTGCAGTATATGGAGGTGCCGCTGACCAACCCCAACCAGATCCTGGAAGGGTTCTTCGGGACGCCGGAGCAGTCGCAGAACTCAGATGAGTCAGCGGTCAAAGAAAACTTCGAACTTGGTAAAGTGGAAGCCACGCCAGCACCAGACAAAGACGACGAAGGCATGAATTCAGACGAGGAGAAGTACCTACAGCTGGTAGTGTTTCAAGCCACATCGACAGTGTCTCCGGGAAGACACGTATGCAACCTTTGCCACAAGGAGTTCAAGCATTCGCGTTGGCTGAAGCAACACATGAGGTCCCACTCCAACTGGATCAAGGCGAACTGCAAGAAGCCACCCATGTGCCCTATATGCGAGAGGACTTTTAAGGGTCCAGGAATGTTGAAAATGCACATGAGGACCCACGAACAAAGGCCTCCGAAGCAGCCAACTTGCTCGGTATGCCAAAGGACCTTCCCCACGAAGACGTTGTTGTACCGTCATCGACAAACCCATTTCGAGCAGAAGACGCATCAGTGCACTGTATGTGAGAAGAGGTTCTACAGCGGATACGCTCTGAGATCGCACATGGCGAGGCATCGAGGCGAACGGCCCTATATCTGCTCCACTTGCAATAAGAGCTTCTATAATCCTACCGATTTGAAGGTCCATTTCCGCCTGCACACCGGAGAGAAGCCGCTGAAATGTTCCGAATGCAACAAGACGTTCCGACGTCACTCGACGCTATGCCAACACATGAAGAAGCACCGTGGGATACGGAACCACATCTGTACTGTTTGCAATAAGGGCTTCTATGAGGTGTCCAAGCTGAATGCTCATATGAGGGTACATACTGGCGAGCGTCCGTACGAGTGTCAGTTCTGCGAGCGTCGTTTCGCGCAGCAGTCGGCGCTGATCTACCACCGCCGCACGCACACCGGCGAGAAGCCCTACAGCTGCAAGCTGTGCTCCGCGCGGTTCACCACCTCCTCCGCCAGGAACAACCACATGGTCACGCACACCGGGAACAAGAGGTTCGTGTGCCCGGTGTGCTTCAAGGGCTGCACGTCGCGCACGGAGCTGCGCGTGCACGCGTCCAAGCACACGGGCGAGAAGCTGTTCTCGTGCGCGCAGTGCGGACAGCGCTTCAGCTCCGCCTCCTACCTGGCCGTGCACCGCCGGTACCACTCCGGGGAGAGGAAGTACCAGTGCCAGATATGTGGGAAAGGCTACATCGAATCAAGTTCATACAAGAAGCATATGAAGACACACGACGTGAAGTCAGAAACAGAGTCCTCAAATTCCGAAAACACGGAGAACCAAATCAACAATCCCAAAATAGATCCGCTAAGTGTTCCCGAACCGCAGACAACCGCTGTTGAAGTCACTACAGAAGAAACCGTGGAACCGCAAAACCAAGTGGCAGTGGCCCAATTACAAGGTCAAGTGCAAGTGCAAGTGGCTGAGACGACGCTGCCGGTGTCCACGCAGGAGGCGTCCCCGCAGCAGCGCCGGTACAAGTGCGGCCTGTGCGTCAAGACATACATGTACCTGCACAGTCTCAAGAAACACATGATGACGCATGTGCAGcaacaacaacaacaacagcagcagcagcaacagcaacagcaacagcaacaacagcagcaacagcaacaacaacagcagcaacaacaacaacaacaacaaactcAACAAGTAGTGCAACAACAACAGTTACAGCAACAAGTGCAACAGCAACAGGTGCAGCAACAACAAGTGCAACAACAACAGGTGCAACACCACCAACAACAGTTGCAGCAACAACAGGCCGTGTTGCAAGTGCAACAGTTAGCCGTGCCGATACACGCGCATCACGTGCAACAGGGAATTGTGCAGACTGGACAGCATTCATATCCGGTGATATCGTCTGTTCAATCGTTGCAGCTACAGCAAACTCAACATGTTAACACGCAACAGCCACAACAACTGCAAGTGCAGACCATACAGATACATCCGCAACATCAACCTATACAAATACATGCGGTGGGAGTGCAACAAGTCCAACAGCAACAGCTGCATGTCGCCACCTCCACGTGCCAGACTATGTTACCAAATATATTACAGTTGCAGCCGGCGACGGTGGCGGTGTCGGGTCTGGGCCAGCAGGAGCTGGGCGGCGGCCTGGCGCACCGCATCATCCTGCAGCCGCCCGCGCACCCGCACGTCTACACCATACACCACtga
Protein Sequence: MAAVNKTQNLKFDKICRACLQIKKDMRPLFEQLTATMLMGISKVQVAVGDGLPPQLCLQCVHQISRCHAFKELVERNDVTLREHAKYLAEEAVKREREENEKILSIGDSTYLQYMEVPLTNPNQILEGFFGTPEQSQNSDESAVKENFELGKVEATPAPDKDDEGMNSDEEKYLQLVVFQATSTVSPGRHVCNLCHKEFKHSRWLKQHMRSHSNWIKANCKKPPMCPICERTFKGPGMLKMHMRTHEQRPPKQPTCSVCQRTFPTKTLLYRHRQTHFEQKTHQCTVCEKRFYSGYALRSHMARHRGERPYICSTCNKSFYNPTDLKVHFRLHTGEKPLKCSECNKTFRRHSTLCQHMKKHRGIRNHICTVCNKGFYEVSKLNAHMRVHTGERPYECQFCERRFAQQSALIYHRRTHTGEKPYSCKLCSARFTTSSARNNHMVTHTGNKRFVCPVCFKGCTSRTELRVHASKHTGEKLFSCAQCGQRFSSASYLAVHRRYHSGERKYQCQICGKGYIESSSYKKHMKTHDVKSETESSNSENTENQINNPKIDPLSVPEPQTTAVEVTTEETVEPQNQVAVAQLQGQVQVQVAETTLPVSTQEASPQQRRYKCGLCVKTYMYLHSLKKHMMTHVQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQTQQVVQQQQLQQQVQQQQVQQQQVQQQQVQHHQQQLQQQQAVLQVQQLAVPIHAHHVQQGIVQTGQHSYPVISSVQSLQLQQTQHVNTQQPQQLQVQTIQIHPQHQPIQIHAVGVQQVQQQQLHVATSTCQTMLPNILQLQPATVAVSGLGQQELGGGLAHRIILQPPAHPHVYTIHH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00290899;
90% Identity: iTF_00428351;
80% Identity: -