Hlin011554.1
Basic Information
- Insect
- Hyles lineata
- Gene Symbol
- Zfy1
- Assembly
- GCA_030180105.1
- Location
- JARJEE010000013.1:526566-529480[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.51 37 5.6 0.6 1 23 38 63 38 63 0.92 2 21 3.3 2.4e+02 3.1 0.1 6 23 145 163 145 163 0.96 3 21 0.0026 0.19 12.8 0.3 1 23 171 194 171 194 0.94 4 21 1.2e-06 8.9e-05 23.3 1.0 2 23 217 238 217 238 0.97 5 21 1.3e-06 9.6e-05 23.2 2.7 1 23 244 267 244 267 0.97 6 21 0.00089 0.064 14.3 0.0 1 23 273 295 273 295 0.97 7 21 0.00014 0.01 16.8 0.4 1 23 301 323 301 323 0.98 8 21 0.035 2.5 9.3 1.1 1 13 329 341 329 343 0.89 9 21 0.37 26 6.1 3.7 1 23 475 497 475 497 0.97 10 21 3.6e-05 0.0026 18.7 1.5 2 23 504 526 503 526 0.95 11 21 0.00023 0.017 16.1 3.4 1 23 532 554 532 554 0.96 12 21 3e-06 0.00021 22.1 3.1 1 23 560 582 560 582 0.98 13 21 5.6e-05 0.004 18.1 1.1 1 23 588 610 588 610 0.98 14 21 0.0013 0.095 13.8 5.8 1 23 616 638 616 638 0.94 15 21 0.00091 0.065 14.3 1.1 1 23 644 667 644 667 0.95 16 21 0.015 1.1 10.4 2.0 3 23 734 753 733 753 0.98 17 21 1.6e-05 0.0011 19.8 0.0 1 23 759 782 759 782 0.96 18 21 0.00072 0.052 14.6 3.5 1 23 788 810 788 810 0.96 19 21 0.022 1.6 9.9 0.0 1 23 816 838 816 838 0.98 20 21 4.4e-05 0.0032 18.4 0.4 2 23 844 865 843 865 0.96 21 21 0.0016 0.12 13.5 0.2 6 23 875 892 874 892 0.99
Sequence Information
- Coding Sequence
- ATGACACCTCACAGGTGTAGCACTCCCATAGAATTTTACAGCATGGTACGAAACGCACTGAGGGATTACTATCACACGTTGAACGTTGATGAAAACGATTCAGATATGAACTATGTCTGCCAGAAATGTAGTGAAAAGTCTTCATTCACAAGCCTCGCTGCATTGGCTGATCATCTGCATACAGAGCATTCAGAAGAAGTATCCTCTCAAAAAAAACTAGcaatatttatcaaaacttATATAACGTTTGAGGAAACTTTGATATCCGAGGCTTCAGACCGCGAGGCACAGTCAGATGTGGAGGATAAGCCAGATAAAAAGCTTCCGAATTACTGCTGCCCGTTCTGCGAAAACATTTACTCGTCGACCACTCGCCTGCTGTGCCACATCAACAAACACGTGGAAGTGACGATAGAGCACGGAGTCATCTGCTGTGACGTCATTTATAACGATAAGAACGCTTTCGTACAACATTTGCAAAGGAGCCATGTAGATCGCATAATTTCCAGCCACGTCTGCAAAACTTGCGGCTACAGCACTGATGACGTCAATGATTTACAAACACACATCAACGACGCTCACTTGCCGAAGGAAGTTGCAAAGGAAAAGAAGCCACAGAGCACTAAAATTCAGAAGTACATTCCGGCAGTGTGTCCGGAGTGCAACAAGACGTTCTCCAATAAATACAACATGTTCGTGCATCTGAAGAGCCACAAACAGACCGAAGTGTATCAGTGCGATAAATGTGACAAAACTTACACTAATCGCGGCAATCTTACGAGCCACCACCGACTCGCTCACGAAGGGATTCTCAAATACGTATGTTCAGAATGTGGGGAAGCTTTCCCCACTCGATCCGGCCGCGACGTCCACGCCAGGATCCACTCCGGAGTGAAACCTTACAAATGCGAATATTGTGAGAAGGCGTACAGAGCCAAAAACACGCTGGACCGCCACATCGAAATCCATTTCGATATAAGAAAATACGAATGTAAAATCTGCAACAAGAAATTCAGAAAGCGGACATGGAATGGGTGCCAGATGAACGCGATAAAAACTGAGAATTGCCAAGAAAACGCTTCAAATAATAGTGGTGATGATCATTCTGTCGACGACGATGATGAACCGCTGTCCACGCTCGTTCATAAGAAAGCTGATCTGTACAACAATTTTTACAAAGCTTTAGTGAATTTCAAAAATCATTTTGCTAGTAAACACAAAACCTTCGAAACATACCCAGAATTCACTGAATCCAGCGACTCCGAGGCTTTAGAAGACAACGAAGAGGATACCGATATGAATGGAGAAAGTATAGAAAATTATGACGACTTGACACAATCTAACATGAGGAAAGATCGGATGGACGAAGAAACTAGATTAGAACTGATCCAAGTGCAAAGGAAAGTGAACGGCAAAGTGTACTACACGTGCAGGATATGCGACAAGAACCTGAGCTCGACGCACACGTACCTGTTCCACCAGCGCATCCACACGGGCGAGCGGCCGTGCGTGTGCCACGTGTGCGGCAAGCAGTTCCGCGCGCCCGCCGGCCTGCAGCGCCACCTGCGCGAGACGCACGAGCGCCTCCGCCGCCACGCCTGCGCGCTCTGCCACAACAAGTTCGCCAACTCACAGAACCTCAAGCAGCACATGCGCATCCACACGGGCGAGCGGCCCTACGCGTGCGCGCACTGCGGCAAGCGCTTCACGCAGAGCGGCTCGCTGCACGTGCACCTCAAGACGCACAGCGCGCTCCTCCCGCACCGCTGTCCCGAGTGCGGCGCCAAGTTCCGCCTGCGCGCCGGCCTGCAGCGCCACCGCCTCAAGCACAGCGGCGAGCGCCCGCACGCCTGCGCGCACTGCAGCAAGGCCTTCCGCCACAAGCACGAGCTCAACAACCACCTGGCCGCGCACTCCGACGCCAAGCCGCACGCCTGCGCGCTCTGCGGACTCGCCTTCAAGCAGCGCCGCGCGCTCCGCTACCACACCAAGCGCGTGCACGACGCCGACCTCGCGCACATACACCAGCTCtattttattgccACCCTAAAACGTCTCCTCAATCCTTACAGACACACTGACATAACGACAAATCAATCGAACGAAGAAGAAGTTCGTCAAGATACGAAAGTCGAGTCAAAAATAGTAGACGAGCCGCCGGTGGTGACCGTCGGCGAGGACGGGCGGAAGTACGCCGCGTGCAAGCACTGCGGCAAGAGCGTCATGTTGAGCTCGTGGAAGCGCCACGTCCGGCGGCACGAGGGCGAGAAGCGGTACAGCTGCGCCGTGTGCGGGCTCGCCTTCAACGACAACGGCAACCTGGCGCGCCACACGCGGGCGCTGCACGCGCACTCACGTCCGCACGCGTGCCGCACGTGCCGCCGCGCCTTCACGCGCGCCGCGCACCTGCGCGACCACGAGCGCTCGCACTCGGAGCGGCGCGAGTTCGTGTGCGAGGCGTGCGGCGCCGCCAGCAAGTCGGCCGCCGCGCTGCGCATGCACCGCGCCACGCACGCCGCGCGCCGCCTGCGCTGCCACACCTGCGGCGCCGCCTTCAAGCGCCGCGGGGAGCTCGCCGCGCACCGCTCCGTGCACTCCGGGGAGAAGGCGCATCTGTGCGCCTGCGGCAAGGCCTTCCGCCTGCGCACGCAACTCAACGCGCACGCGCGCACGCACCAACACCACACAGCACACGTAGAAAACTGA
- Protein Sequence
- MTPHRCSTPIEFYSMVRNALRDYYHTLNVDENDSDMNYVCQKCSEKSSFTSLAALADHLHTEHSEEVSSQKKLAIFIKTYITFEETLISEASDREAQSDVEDKPDKKLPNYCCPFCENIYSSTTRLLCHINKHVEVTIEHGVICCDVIYNDKNAFVQHLQRSHVDRIISSHVCKTCGYSTDDVNDLQTHINDAHLPKEVAKEKKPQSTKIQKYIPAVCPECNKTFSNKYNMFVHLKSHKQTEVYQCDKCDKTYTNRGNLTSHHRLAHEGILKYVCSECGEAFPTRSGRDVHARIHSGVKPYKCEYCEKAYRAKNTLDRHIEIHFDIRKYECKICNKKFRKRTWNGCQMNAIKTENCQENASNNSGDDHSVDDDDEPLSTLVHKKADLYNNFYKALVNFKNHFASKHKTFETYPEFTESSDSEALEDNEEDTDMNGESIENYDDLTQSNMRKDRMDEETRLELIQVQRKVNGKVYYTCRICDKNLSSTHTYLFHQRIHTGERPCVCHVCGKQFRAPAGLQRHLRETHERLRRHACALCHNKFANSQNLKQHMRIHTGERPYACAHCGKRFTQSGSLHVHLKTHSALLPHRCPECGAKFRLRAGLQRHRLKHSGERPHACAHCSKAFRHKHELNNHLAAHSDAKPHACALCGLAFKQRRALRYHTKRVHDADLAHIHQLYFIATLKRLLNPYRHTDITTNQSNEEEVRQDTKVESKIVDEPPVVTVGEDGRKYAACKHCGKSVMLSSWKRHVRRHEGEKRYSCAVCGLAFNDNGNLARHTRALHAHSRPHACRTCRRAFTRAAHLRDHERSHSERREFVCEACGAASKSAAALRMHRATHAARRLRCHTCGAAFKRRGELAAHRSVHSGEKAHLCACGKAFRLRTQLNAHARTHQHHTAHVEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00428343;
- 90% Identity
- -
- 80% Identity
- -