Hlin015842.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hyles lineata
Gene Symbol
Mug2
Assembly
GCA_030180105.1
Location
JARJEE010000018.1:10689188-10709985[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.6e-07 0.00021 21.5 0.0 4 40 787 823 785 826 0.90

Sequence Information

Coding Sequence
ATGTACCTTGTAGTAAAAGAAAGCAATCCATGCACGGACCAGAACCACCTGTTCCTAGCGCCGGGAGTGCTGACGGCAGGCGGTACCAACAGAGCGTGTATATCCAGGTTCTATCCCGAAGGAGTGGCGCATCTGCACCTTACACTCGTCACAGAGGATCGACAGACTGTCACCACCTCTAGAGAACTGCCTGCAGGTGACGGAGGATGCCTGGATATATCAGTACCACTTCTACCCAACACAAAAGCAGAGCTGATTGTCAACTTAAGGTACCCAGAAGCAAGTTGCACCTGGGAGCGTCGCCTGACCGTGCGTATATCAAGTGGCCGCGTCCTTCTAGTCCACACGGAGCGCGCTCGATACCGCCCCGGGGAGACTCTGCGCTTCAGGGTGCTTGCCTTCAAGCCTGACCTGATGCCTTCGCACGGCATGATCGACGAGATCTGGATCGAGGGCAGCCGCGGCGCGTGGGAGGGGTCGCGCATCAcgcagtggtcgcgggttcgaacccggcTGGGCATCGCGCAGCTGCAGTACGAGTTGGACGAGCTGGCGCCGGCGGGCAAGTGGACTGTACGCGCTAGTCTCGCTGATGGATCCCAGGGCTCGGCGACGTTCTGGGTGGGCAACTACGAGCTGCCGCCCTTCCAGCTGAGCGTGCGGCACCCGGCGCGCGTGCTGAGAACCAGCGAGAGGCTCGTCTGGACTGTTTGTGTCAGATACCCCTGGTCGGAGGCGGTGGAGGGCATGCTGGTGATCCGTCTGCGCGGCTCGGGGGGTAGtggtgggggtgggggggtGCGCACTGCCGTGAAGCTGCGAGCGCCGCGCGCGTGCCAccgccacgccgccgccgcgcgccgcgtgGGGCTGCACGGAGACAACCCCGCTGAACTCGTCATCGCTGACTTCTCATTCCAGGAGGACGGTACTAGGATTTGGCAGAACACGACGGTGGTGTCCCGCGTAGTGGACAAGGCAGTGTCTCTCGAATTTCTCACAAAGCACCGCGCGGTAATCTCGCCTGGACTGCCGCACAAACTGAAGGTGAAAGCGACCCGGTGGGACGACAAGCCGGCGGTGCAGCAGCGGGTGCTGGTGTGCCGCTACCCCGCGCTGTCCGAGCAGGCCGGCGCGCGGGACTCCACGGACGTGACGTGCGCCTCCGCAGAGACCGACGACGCGGGCGTCGCCACCACCATGTTCCCGCCAGGGGAACATAACACGCCCTTCTATAGATTCGAGGCGAGCCTATCCAACGACACGTCGACGACAGCCCCGCCGCTGACGCTGGGCGtgcagcgcggcggcgcggtgcAGGCGGCGCTGGGGCGGCTGCGCGCGGAGTGGCGCGCGGCGCGCACGCTGCTGCCGCTGTACCTGCACCCCGCGCCCGGCGGCACGCCCATCACCGTGCACTTCGTCGTAATAACCCGAGGCGGCGTGATATACCGTTGGGGAGCCACTACCCAATGTCCAATAGCCAACTCGGCCAACCAGGTCCAAACAGCGCCTCGCTACAGCAAGTGCCCACAGGACTTGGCTCAAACGAACCTTGACTCCAACATCACCAGCGATTCCCTCCTCGATAGACATCAGTTGAGGGTCATGCTGCCTATCAAGGTGACTCCTCAAATGTGCCCTGACAGTGACCTGATCGCGTACTTCTACTATAAGGGAGAGTTGGTCAGTGCCAGCAAGCATATCGAGATGGAAGAGTGCTTCGTTAATAAGGTGGAAGCAGTATGGCTATCCCGGCAAGTCCTCCCCGGGTCCACGGCGTCCCTTCAAATATCCACCCCGGGACCATCCCTCTGCGCCCTCACGGTGGTGGATAGCGCCACCAAGTGGGCGCATCCACCAGCCAACGTGCAGGAAGAGCTCATGAAGAGCCTGCGAAGAGTTATAGACAGTCACAGGAACCTTACTGAGTATGACGCGGCTGGGGACTGCTTTTTCAGCACGGACAGCACATCTCCGCCCAGCAGTAGCGCGGAGCTGCTGCACgcggtggcggcgcgcgcggccgtgcgcgtggcgggcggcgcggggggcgcgggcggcgcggcggggggcgcggggggcgccgTGCactgcgcgccgccgccgcacgcgcTTGTATCTGCTGACGGGATCGTGGCGAGGAGTGACTTCTCTGAGGCGTGGTTATGGCGCCTGCTGGCGGTGGGTATGAACGGGTCGGCGGTGGCGAGTGCGCGTGCGCCGGACTCGGTGACGCGGTACGAGGCGGGCGCGCTGTGCGTCTCCAAGAACGGGGTGGCCGTGTCGCAACCCGCTGTGCTGCAGaTGCCGAAAGTACGAGCTAGGACAACTCAGAAGGCTTCTTGGTCTTCTAATAACCTAGAAAATGCTTTACAGCTTATTAATAGCGGTTCTTCTATAAGAAATGCTGCTAAAACTATGGGAATTCCATTTTCCAGCCTTCAAAAGAGGGTAAAAAAAGGTTCTACTTTAGGACCACATCTAGGACGATACGCTGTGTTCACTCCTGATGCAGAAGCCGAGCTAGCAAACTTGGTGAAGAAAATGgcaaatattttctatggttGCACCGCTAATCAAAAAGAAAACCtcatagaaaaagaaaataagaaaataaagaaaaaaggaGAAACACAGAAAGAAAGTAAGAAATGGAAAGGTAAAGGTCAGGGAAAGAAAACTAAAGTACAGAAGAAAGGTCCAGAAAAGATAAAGCGTCAAGTATTACAAGAATCGAATGAAACGTCGGTATCTGATGTTGGGACTGACGAATTGTGCCAGGACAATGAGGATGATGACACAGAAGATGTGGGAAACAGGTGCCTAGTATGCAACGATTTCGGAAGAAACAATGAGATGTGGTTTAGATGCACCTCTTGCGGGCTATGGGCTCACTCGGAATGCACTGGGTGGGATTCAGCAAATGGTTATGTCTGCGATATGTGCTAG
Protein Sequence
MYLVVKESNPCTDQNHLFLAPGVLTAGGTNRACISRFYPEGVAHLHLTLVTEDRQTVTTSRELPAGDGGCLDISVPLLPNTKAELIVNLRYPEASCTWERRLTVRISSGRVLLVHTERARYRPGETLRFRVLAFKPDLMPSHGMIDEIWIEGSRGAWEGSRITQWSRVRTRLGIAQLQYELDELAPAGKWTVRASLADGSQGSATFWVGNYELPPFQLSVRHPARVLRTSERLVWTVCVRYPWSEAVEGMLVIRLRGSGGSGGGGGVRTAVKLRAPRACHRHAAAARRVGLHGDNPAELVIADFSFQEDGTRIWQNTTVVSRVVDKAVSLEFLTKHRAVISPGLPHKLKVKATRWDDKPAVQQRVLVCRYPALSEQAGARDSTDVTCASAETDDAGVATTMFPPGEHNTPFYRFEASLSNDTSTTAPPLTLGVQRGGAVQAALGRLRAEWRAARTLLPLYLHPAPGGTPITVHFVVITRGGVIYRWGATTQCPIANSANQVQTAPRYSKCPQDLAQTNLDSNITSDSLLDRHQLRVMLPIKVTPQMCPDSDLIAYFYYKGELVSASKHIEMEECFVNKVEAVWLSRQVLPGSTASLQISTPGPSLCALTVVDSATKWAHPPANVQEELMKSLRRVIDSHRNLTEYDAAGDCFFSTDSTSPPSSSAELLHAVAARAAVRVAGGAGGAGGAAGGAGGAVHCAPPPHALVSADGIVARSDFSEAWLWRLLAVGMNGSAVASARAPDSVTRYEAGALCVSKNGVAVSQPAVLQMPKVRARTTQKASWSSNNLENALQLINSGSSIRNAAKTMGIPFSSLQKRVKKGSTLGPHLGRYAVFTPDAEAELANLVKKMANIFYGCTANQKENLIEKENKKIKKKGETQKESKKWKGKGQGKKTKVQKKGPEKIKRQVLQESNETSVSDVGTDELCQDNEDDDTEDVGNRCLVCNDFGRNNEMWFRCTSCGLWAHSECTGWDSANGYVCDMC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-