Hlin022158.1
Basic Information
- Insect
- Hyles lineata
- Gene Symbol
- -
- Assembly
- GCA_030180105.1
- Location
- JARJEE010000032.1:2604308-2604919[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-07 0.00021 21.5 0.0 17 43 1 27 1 29 0.91
Sequence Information
- Coding Sequence
- ATGGGGCTTAACAAGGCTTCTAATGAGTATAATGTaccaaaaattacattaaaacgaAGATTGGAGAAATATATGACTACCAAAGACATTGATAAAGCCACAGAGAGGAAATTAGGTCGGTTTGAacagatttttaataaagagcAAGAACTTGAATTAGCTTCGTATGCCAAAGATATGGAAAGTCGATTTTTTAGACTGACAACCAAAGATATGAGGAGATTAGCGTATGATTTAGCggaaaagaataatattagacATAACTTTGGTACATGCAAGAAAATGGCGGGCAGAGTATGGCTTGAAAATTTTCTCAAGCGTAACACAGATCTGAGTCTCCGTAAGCCTGAAGCAACATCCGCAGCCCGAGCATCCGGTTTTAACCAAGTTTCCGTAAATAAATTCTTTGATTTGCTGGAACAGGTAATAGAAACTCATCAACTGACTCCAGTAAAAAAAAGGACTGTTCAAAGATATAAAAACACAGACGAAAAGAAAAGTAGCAGAAAAGAAATCTCAtgtaaagaaattgaaaaagaaaattacaaaaaaataagaacgATACTTTACAACGGCCATCAAAAGGCAAAGCTAGCAAAAACAGTGATATAA
- Protein Sequence
- MGLNKASNEYNVPKITLKRRLEKYMTTKDIDKATERKLGRFEQIFNKEQELELASYAKDMESRFFRLTTKDMRRLAYDLAEKNNIRHNFGTCKKMAGRVWLENFLKRNTDLSLRKPEATSAARASGFNQVSVNKFFDLLEQVIETHQLTPVKKRTVQRYKNTDEKKSSRKEISCKEIEKENYKKIRTILYNGHQKAKLAKTVI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00819107; iTF_00819108;
- 90% Identity
- iTF_00819107;
- 80% Identity
- iTF_00819107;