Basic Information

Insect: Hyles lineata
Gene Symbol: -
Assembly: GCA_030180105.1
Location: JARJEE010000002.1:20056011-20067338[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5.2e-08 3.1e-05 24.2 0.0 6 38 597 629 592 633 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5.2e-08	3.1e-05	24.2	0.0	6	38	597	629	592	633	0.86

Sequence Information

Coding Sequence: ATGACCTGCATGCTGCAGCTCCAGCTAGTCGAGTGGATCGACCGGTCTATCCGGGGCACCCTCGACCGAAAAGAAGAAGACGACTCAGatgactccagcacatctgaaGAGGAAGCGGACCCGGAACCAGAGCCGATGGAAGTTATACAGACTTCAATCAGGCGCCCAAGAATCCCGGAAGATGAAGACGAAGAGGACACCCACCGCCGCCGCAGGACGTCAGCTGGCACCGGCAACGACTCCGTGGCGAGCAGCAGCAACGACACCATAAAGAGGGCAAAGTTGGCCTCCACGGTCAACTCGACGCCCTCTACATCGACACCGACACCGACGCTGAAAACTGCACCAACAACTGTGGTGGCGCACACCCGGCATGCTACACTGCATGCCCAACACCACAACCGCGACCGTTGGAAACACAGCGCTAATGGCCGCCGCAAACAACCCGCACGAGAGACGCCAGCCCGGAAAGAAGCGAGGCAAGGGAAAAAAGAAGCAGCAGAAGAAGAACCAGACAGCACCAGCGCCGGAAACCACGAACACAGCTTCGGCGGCCCCGGTTACGACTGCGCCCGCCGCAAACCATTGAGAATATTACATTGGAACACCAACGGTCTTCGTAACAAGATCGTTCATCTCAAGCCGCTCCTACGAGAACAGGACATCGACGTTGTGCTGATAAATGAAACGCACCTGGGACCTGCGGACATCTGCAGACTCCCAGGATACTTCATGTACCGGCAAGACGAACTCTCACCATACAACAGATCCTACAGAGGATTGCTAGTAGCCGTAAAGAGAAGACTCTTTCACCAAGCACTACCGCAACTACAGCTCCGCTCGATGTACGGACTTGGCATGGAAGTATGCATCTCAGGCAACCCCCATCGGTTGTTTGCCGCCTACAAGCCACCGAGATCGAGATTGGCAAGAGCCGATATCCGTGCCTTGCTCGACTCACCACACCCGACCATCATCGCCGGAGACCTGAACGCCAAGCTTCCAACTTGGGACCCGTCATCCAACGCGACTCACTTTGGCAAGATACCTGGACTACTGGCTGCTTTTGGATTAATCATGCCCGATAAAAATCGTTTGGTGTGTTATTACGGGTGCATCAATGATGAAGAATCAGAATTTATATCCGACTCCAATTTATTCATAACTTCTTTGGTGCCAATTAAATTGGTAAATTTAGAAACTAGTGAAATAGTTTGGCAGAACCCTGTACCTTCATCAGTGAGGTTTTGTCGAGCTATATCTATCGAGTTTTCAAAAGAAACTCCTGAAAAGACAAGAGAAGTCGTAGACAatataaaactacaaataaattcaattacttCAACACTCATAAATAAAGGAGGTGAAGGCGTGGAGATTAAACACCAACTATTTCTCACTATGATAGATGGAAAAGTTGCACAAGTGCTAACAGATACTTCTTCTAGTTCGACTTGCACTATATGTCGTGCTACTCCTCGTCAAATGAATGATCTTGATAAAGTGACAGCCAGACTAGAAGACAAAAGCAGCTATGAATATGGTTTATCTACGTTACATGCCTGGATTGGATGTATGGAGATGTTTTTGCACATTTCCTACAACCTTTCCTTTATGAAATGGTCAGCTACAGATGATGACAACAAGCGTTTGAAACAGGAAAAGAAGAACTATGTTCAAAGACGTTTTCGTGAAGAAAAAGGATTAATAATCGATAAACCAAGACAAaaAATGGTGCGCACGTACAAACCCAAAACtgatagaaaaaatatcaatgaagaAGACACTGAAGATGCAATACGTGAATTATTGTCAAAGGCTCTATCTATACGCAAAGCAGCCAACAAATATGGCATCAAAACTGCAACCCTACAACATCGCATAGAAAAAGCCAGAAAATCATTTGAAGCTACCAAAACATTATCTACAAATGAAGCATCCTCTTCATTACAAGCAGAATCTTCTTTATCACAAACAGGTCCATCTTCACCACAAATAGCACCATCTATGGAGATGGCACAAATAGCATCATCTTCAGCACACACTACTACTGCAGTTTTATCATCACACACTGCTACAGCTACTTCATCAAACATCTATGGTTCCAAGTATACCATGCACATTTTTCAACCGAACAAGAAAAGGCATTGa
Protein Sequence: MTCMLQLQLVEWIDRSIRGTLDRKEEDDSDDSSTSEEEADPEPEPMEVIQTSIRRPRIPEDEDEEDTHRRRRTSAGTGNDSVASSSNDTIKRAKLASTVNSTPSTSTPTPTLKTAPTTVVAHTRHATLHAQHHNRDRWKHSANGRRKQPARETPARKEARQGKKEAAEEEPDSTSAGNHEHSFGGPGYDCARRKPLRILHWNTNGLRNKIVHLKPLLREQDIDVVLINETHLGPADICRLPGYFMYRQDELSPYNRSYRGLLVAVKRRLFHQALPQLQLRSMYGLGMEVCISGNPHRLFAAYKPPRSRLARADIRALLDSPHPTIIAGDLNAKLPTWDPSSNATHFGKIPGLLAAFGLIMPDKNRLVCYYGCINDEESEFISDSNLFITSLVPIKLVNLETSEIVWQNPVPSSVRFCRAISIEFSKETPEKTREVVDNIKLQINSITSTLINKGGEGVEIKHQLFLTMIDGKVAQVLTDTSSSSTCTICRATPRQMNDLDKVTARLEDKSSYEYGLSTLHAWIGCMEMFLHISYNLSFMKWSATDDDNKRLKQEKKNYVQRRFREEKGLIIDKPRQKMVRTYKPKTDRKNINEEDTEDAIRELLSKALSIRKAANKYGIKTATLQHRIEKARKSFEATKTLSTNEASSSLQAESSLSQTGPSSPQIAPSMEMAQIASSSAHTTTAVLSSHTATATSSNIYGSKYTMHIFQPNKKRH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -