Hlin017426.1
Basic Information
- Insect
- Hyles lineata
- Gene Symbol
- -
- Assembly
- GCA_030180105.1
- Location
- JARJEE010000021.1:3958081-3969712[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4e-08 2.6e-05 24.4 0.0 1 38 16 52 16 54 0.96 2 2 4.4e-08 2.6e-05 24.4 0.0 1 38 1581 1617 1581 1619 0.96
Sequence Information
- Coding Sequence
- ATGAAACCAAACGAAGTAAAGAaaccaaataaaagaaaacaatacacAAACGAAAACTTACTAAAGGCCTTGGATGCAGTAAAAAAGGGTATGTCCAAAAAACTGGCCTCGAAAACTTTCAATGTACCTAGGGGAACTATCCAGTCGCGATTAAGAAAGCCGTGCAAGGATCTACCAGGCCCTGAACCAATATTGTCCAACGAAGAAGAGGGAGTTTTAGTACAGTGGGTTATAGATTGTTGTCGGAAAGGATTCCCAAAAAGGAAGTCTGATTTACAATTGAGTGTAGCAAATTTCTTAAAGAAAACAGGAAGAGACAACCCCTTTAAAGATGATATACCTGGTAAAAAATGGTATGACCTTTTTATGCGCCGTCATCCCGAACTTAGCGAACGCACTGTCGAAGCTGTAACATCAGCCAGTGCTAATGTATCAGAAAAAGACATCAAAGGGTGGTTCCATAAAATCGAGCTTTATCTTAAAGAAAACAACTACCTTGATATCTTACAGGACCCATCTCGTGTTTTGAATGGGGACGAATCTAACTTTCAGCTATGTCCCAAAAGTGGCAAAGTCATTTCATTACGAGGAGAACGAGACGTGTATGAAGTTGATCACGCTGCAGCTAAAACAGCACTTACTGTACTGTTTACGTTTTGCGCTAACGGAGATATTACACCTCCACTGGTTGTGTTTCCCAACAAGAGGCTTCCCAAGGATATAACATCATCAGTTCCAAATGAGTGGGGCATTGGTTTGAGCGATACTAGATGGATGAAATCTGAACTTTTCTATGATtatatcaaaaatgtatttcatcCATACCTTATCAAAAGAAAATCAACATTTCCTGTCATACTATTTGTAGATGGGCACAAAACACATCTTAGTCTTGAAGTGAGTGAATTGTGCAGCAAGTTGCAGATTGTTTTGATTGCTCTATACCCCAACGCCACACGGATACTACAGCCAGCCGACGTGTCAGCTTTTAAACCTCTCAAAAATGCATGGAAGGAAAGTGTCCTGAAATGGAGGAGAGATCACCCTTTGGAGACTCTCACAAAGAACAATTTTGTACCGGTCCTTAAGGAGGCTTTAGAGGTTGGCGTCAAAGATACCACGGTGATAAATGGATTCAGGACTACTGGCTTATGTCCCTGGAACTCTGAAGCCATCGACTACAGAAAATGCCTAGTAATATTAGCAGAAGATTATGTTGATGAAATGCAAGCTATGAATACTGCGATAGCGAATAAGCCATCTGATAACAATACGGAAGATTGTCTTGGGAGTGCGCAATTGGTATGTCTTGATAGTCAACAATATTTACTAACTCCAGTCAAATTACAGGACATACTGATTATGGAAAAAACGCCTGAACGAAAAGGTGTTAAGAATGTAGAGAGATCAACATTCGTTCTTACTTCAGCTGAGTGGCAGAAGACTGAAAACGACAAATTGAAAGCTAGAAAACTTAAAGAAGAAGAACAGGAGACTCGCCCTGAACCAATATTGTCCAACGAAGAAGAGGGAGTTTTAGTACAGTGGGTTATAGATTGTTGTCGGAAAGGATTCCCAAAAAGGAAGTCTGATTTACAATTGAGTGTAGCAAATTTCTTAAAGAAAACAGGAAGAGACAACCCCTTTAAAGATGATATACCTGGTAAAAAATGGTATGACCTTTTTATGCGCCGTCATCCCGAACTTAGCGAACGCACTGTCGAAGCTGTAACATCAGCCAGTGCTAATGTATCAGAAAAAGACATCAAAGGGTGGTTCCATAAAATTGAGCTTTATCTTAAAGAAAACAACTACCTTGATATCTTACAGGACCCATCTCGTGTTTTTAATGGGGACGAATCTAACTTTCAGCTATGTCCCAAAAGTGGCAAAGTCATTTCATTACGAGGAGAACGAGACGTGTATGAAGTTGATCACGCTGCAGCTAAAACAGCCCTTACTGTACTGTTTACGTTTTGCGCTAACGGAGATATTACACCTCCACTGGTTGTGTTTCCCAACAAGAGGCTTCCCAAGGATATAACATCATCAGTTCCAAATGAGTGGGGCATTGGTTTGAGCGATACTGGATGGATGAAATCTGAACTTTTCTATGATtatatcaaaaatgtatttcatcCATACCTTATCAAAAGAAAATCAACATTTCCTGTCATACTATTTGTAGATGGGCACAAAACACATCTTAGTCTTGAAGTGAGTGAATTGTGCAGCAAGTTGCAGATTGTTTTGATTGCTCTATACCCCAACGCCACACGGATACTACAGCCAGCCGACGTGTCAGCTTTTAAACCTCTCAAAAATGCATGGAAGGAAAGTGTCCTGAAATGGAGGAGAGATCACCCTTTGGAGACTCTCACAAAGAACAATTTTGTACCGGTCCTTAAGGAGGCTTTAGAGGTTGGCGTCAAAGATACCACGGTGATAAATGGATTCAGGACTACTGGCTTATGTCCCTGGAACTCTGAAGCCATCGACTACAGAAAATGCCTAGGTAAAGGAAGTAAACATGATAAAGAACCGAaagaaaacaaatcaaatacagaagaaaattctaataaagatagaGTTATGACAcatgaaactttaaaaaatattgtaggtcaagaaaaaattacatttctgcAAAGAACGCCGCTTGAAAGTTTAACAGAAACAGAGAAGATTTTAAAGaagatttgttgttattttgaaaATCATCAGACTGACGCCTCCGCGTCCCAAGAATCAGTTGTCAGGATTGAAAATTACGAAGCAGATGAATTTCTCCATATCGATCAATTTCCAGTAATATTAGCAGAAGATTATGTTGATGAAATGCAAGCTATGAATACTGCGATAGCGAATAAGCCATCTGATAACAATACGGAAGATTGTCTTGGGAGTGCGCAATTGGTATGTCTTGATAGTCAACAATATTTACTAACTCCAGTCAAATTACAGGACATACTGATTATGGAAAAAACGCCTGAACGAAAAGGTGTTAAGAATGTAGAGAGATCAACATTCGTTCTTACTTCAGCTGAGTGGCAGAAGACTGAAAACGACAAATTGAAAGCTAGAAAACTTAAAGAAGAAGAACAGGAGACTCGTAAGAAGCACCGATTACTGAaacaagaagaaaaaaataacgcGAAAGTAGTAACCACTAGaaataagataaacaaaaaagcGAAAGAGACAATAGCTACTAAAAAACAAGAGACAAGAGGCCCTGAACCAATATTGTCCAACGAAGAAGAGGGAGTTTTAGTACAGTGGGTTATAGATTGTTGTCGGAAAGGATTCCCAAAAAGGAAGTCTGATTTACAATTGAGTGTAGCAAATTTCTTAAAGAAAACAGGAAGAGACAACCCCTTTAAAGATGATATACCTGGTAAAAAATGGTATGACCTTTTTATGCGCCGTCATCCCGAACTTAGCGAACGCACTGTCGAAGCTGTAACATCAGCCAGTGCTAATGTATCAGAAAAAGACATCAAAGGGTGGTTCCATAAAATTGAGCTTTATCTTAAAGAAAACAACTACCTTGATATCTTACAGGACCCATCTCGTGTTTTTAATGGGGACGAATCTAACTTTCAGCTATGTCCCAAAAGTGGCAAAGTCATTTCATTACGAGGAGAACGAGACGTGTATGAAGTTGATCACGCTGCAGCTAAAACAGCCCTTACTGTACTGTTTACGTTTTGCGCTAACGGAGATATTACACCTCCACTGGTTGTGTTTCCCAACAAGAGGCTTCCCAAGGATATAACATCATCAGTTCCAAATGAGTGGGGCATTGGTTTGAGCGATACTGGATGGATGAAATCTGAACTTTTCTATGATtatatcaaaaatgtatttcatcCATACCTTATCAAAAGAAAATCAACATTTCCTGTCATACTATTTGTAGATGGGCACAAAACACATCTTAGTCTTGAAGTGAGTGAATTGTGCAGCAAGTTGCAGATTGTTTTGATTGCTCTATACCCCAACGCCACACGGATACTACAGCCAGCCGACGTGTCAGCTTTTAAACCTCTCAAAAATGCATGGAAGGAAAGTGTCCTGAAATGGAGGAGAGATCACCCTTTGGAGACTCTCACAAAGAACAATTTTGTACCGGTCCTTAAGGAGGCTTTAGAGGTTGGCGTCAAAGATACCACGGTGATAAATGGATTCAGGACTACTGGCTTATGTCCCTGGAACTCTGAAGCCATCGACTACAGAAAATGCCTAGTAATATTAGCAGAAGATTATGTTGATGAAATGCAAGCTATGAATACTGCGATAGCGAATAAGCCATCTGATAACAATACGGAAGATTGTCTTGGGAGTGCGCAATTGGTATGTCTTGATAGTCAACAATATTTACTAACTCCAGTCAAATTACAGGACATACTGATTATGGAAAAAACGCCTGAACGAAAAGGTGTTAAGAATGTAGAGAGATCAACATTCGTTCTTACTTCAGCTGAGTGGCAGAAGACTGAAAACGACAAATTGAAAGCTAGAAAACTTAAAGAAGAAGAACAGGAGACTCAAAATGAATATCCCTCTAACCTTAAGAAAAGAAACGCTGAAGAACAGCCTTTGTTaccaccaaataaaaaaatacaaattctttCCGACATAAAACTGAATTTACCAAACATATCCAGAACTTCGCAAACCCACCTACCTATCATGAAACCAAACGAAGTAAAGAaaccaaataaaagaaaacaatacacAAACGAAAACTTACTAAAGGCCTTGGATGCAGTAAAAAAGGGTATGTCCAAAAAACTGGCCTCGAAAACTTTCAATGTACCTAGGGGAACTATCCAGTCGCGATTAAGAAAGCCGTGCAAGGATCTACCAGGCCCTGAACCAATATTGTCCAACGAAGAAGAGGGAGTTTTAGTACAGTGGGTTATAGATTGTTGTCGGAAAGGATTCCCAAAAAGGAAGTCTGATTTACAATTGAGTGTAGCAAATTTCTTAAAGAAAACAGGAAGAGACAACCCCTTTAAAGATGATATACCTGGTAAAAAATGGTATGACCTTTTTATGCGCCGTCATCCCGAACTTAGCGAACGCACTGTCGAAGCTGTAACATCAGCCAGTGCTAATGTATCAGAAAAAGACATCAAAGGGTGGTTCCATAAAATTGAGCTTTATCTTAAAGAAAACAACTACCTTGATATCTTACAGGACCCATCTCGTGTTTTTAATGGGGACGAATCTAACTTTCAGCTATGTCCCAAAAGTGGCAAAGTCATTTCATTACGAGGAGAACGAGACGTGTATGAAGTTGATCACGCTGCAGCTAAAACAGCCCTTACTGTACTGTTTACGTTTTGCGCTAACGGAGATATTACACCTCCACTGGTTGTGTTTCCCAACAAGAGGCTTCCCAAGGATATAACATCATCAGTTCCAAATGAGTGGGGCATTGGTTTGAGCGATACTGGATGGATGAAATCTGAACTTTTCTATGATtatatcaaaaatgtatttcatcCATACCTTATCAAAAGAAAATCAACATTTCCTGTCATACTATTTGTAGATGGGCACAAAACACATCTTAGTCTTGAAGTGAGTGAATTGTGCAGCAAGTTGCAGATTGTTTTGATTGCTCTATACCCCAACGCCACACGGATACTACAGCCAGCCGACGTGTCAGCTTTTAAACCTCTCAAAAATGCATGGAAGGAAAGTGTCCTGAAATGGAGGAGAGATCACCCTTTGGAGACTCTCACAAAGAACAATTTTGTACCGGTCCTTAAGGAGGCTTTAGAGGTTGGCGTCAAAGATACCACGGTGATAAATGGATTCAGGACTACTGGCTTATGTCCCTGGAACTCTGAAGCCATCGACTACAGAAAATGCCTAGGTAAAGGAAGTAAACATGATAAAGAACCGAaagaaaacaaatcaaatacagaagaaaattctaataaagatagaGTTATGACAcatgaaactttaaaaaatattgtaggtcaagaaaaaattacatttctgcAAAGAACGCCGCTTGAAAGTTTAACAGAAACAGAGAAGATTTTAAAGaagatttgttgttattttgaaaATCATCAGACTGACGCCTCCGCGTCCCAAGAATCAGTTGTCAGGATTGAAAATTACGAAGCAGATGAATTTCTCCATATCGATCAATTTCCAGTAATATTAGCAGAAGATTATGTTGATGAAATGCAAGCTATGAATACTGCGATAGCGAATAAGCCATCTGATAACAATACGGAAGATTGTCTTGGGAGTGCGCAATTGGTATGTCTTGATAGTCAACAATATTTACTAACTCCAGTCAAATTACAGGACATACTGATTATGGAAAAAACGCCTGAACGAAAAGGTGTTAAGAATGTAGAGAGATCAACATTCGTTCTTACTTCAGCTGAGTGGCAGAAGACTGAAAACGACAAATTGAAAGCTAGAAAACTTAAAGAAGAAGAACAGGAGACTCGTAAGAAGCACCGATTACTGAaacaagaagaaaaaaataacgcGAAAGTAGTAACCACTAGaaataagataaacaaaaaagcGAAAGAGACAATAGCTACTAAAAAACAAGAGACAAGAGAACTTCGCAAGTTGGTCAAAGAGATGAAAACCGAATTAGTGACCCTTTGgacaaaataa
- Protein Sequence
- MKPNEVKKPNKRKQYTNENLLKALDAVKKGMSKKLASKTFNVPRGTIQSRLRKPCKDLPGPEPILSNEEEGVLVQWVIDCCRKGFPKRKSDLQLSVANFLKKTGRDNPFKDDIPGKKWYDLFMRRHPELSERTVEAVTSASANVSEKDIKGWFHKIELYLKENNYLDILQDPSRVLNGDESNFQLCPKSGKVISLRGERDVYEVDHAAAKTALTVLFTFCANGDITPPLVVFPNKRLPKDITSSVPNEWGIGLSDTRWMKSELFYDYIKNVFHPYLIKRKSTFPVILFVDGHKTHLSLEVSELCSKLQIVLIALYPNATRILQPADVSAFKPLKNAWKESVLKWRRDHPLETLTKNNFVPVLKEALEVGVKDTTVINGFRTTGLCPWNSEAIDYRKCLVILAEDYVDEMQAMNTAIANKPSDNNTEDCLGSAQLVCLDSQQYLLTPVKLQDILIMEKTPERKGVKNVERSTFVLTSAEWQKTENDKLKARKLKEEEQETRPEPILSNEEEGVLVQWVIDCCRKGFPKRKSDLQLSVANFLKKTGRDNPFKDDIPGKKWYDLFMRRHPELSERTVEAVTSASANVSEKDIKGWFHKIELYLKENNYLDILQDPSRVFNGDESNFQLCPKSGKVISLRGERDVYEVDHAAAKTALTVLFTFCANGDITPPLVVFPNKRLPKDITSSVPNEWGIGLSDTGWMKSELFYDYIKNVFHPYLIKRKSTFPVILFVDGHKTHLSLEVSELCSKLQIVLIALYPNATRILQPADVSAFKPLKNAWKESVLKWRRDHPLETLTKNNFVPVLKEALEVGVKDTTVINGFRTTGLCPWNSEAIDYRKCLGKGSKHDKEPKENKSNTEENSNKDRVMTHETLKNIVGQEKITFLQRTPLESLTETEKILKKICCYFENHQTDASASQESVVRIENYEADEFLHIDQFPVILAEDYVDEMQAMNTAIANKPSDNNTEDCLGSAQLVCLDSQQYLLTPVKLQDILIMEKTPERKGVKNVERSTFVLTSAEWQKTENDKLKARKLKEEEQETRKKHRLLKQEEKNNAKVVTTRNKINKKAKETIATKKQETRGPEPILSNEEEGVLVQWVIDCCRKGFPKRKSDLQLSVANFLKKTGRDNPFKDDIPGKKWYDLFMRRHPELSERTVEAVTSASANVSEKDIKGWFHKIELYLKENNYLDILQDPSRVFNGDESNFQLCPKSGKVISLRGERDVYEVDHAAAKTALTVLFTFCANGDITPPLVVFPNKRLPKDITSSVPNEWGIGLSDTGWMKSELFYDYIKNVFHPYLIKRKSTFPVILFVDGHKTHLSLEVSELCSKLQIVLIALYPNATRILQPADVSAFKPLKNAWKESVLKWRRDHPLETLTKNNFVPVLKEALEVGVKDTTVINGFRTTGLCPWNSEAIDYRKCLVILAEDYVDEMQAMNTAIANKPSDNNTEDCLGSAQLVCLDSQQYLLTPVKLQDILIMEKTPERKGVKNVERSTFVLTSAEWQKTENDKLKARKLKEEEQETQNEYPSNLKKRNAEEQPLLPPNKKIQILSDIKLNLPNISRTSQTHLPIMKPNEVKKPNKRKQYTNENLLKALDAVKKGMSKKLASKTFNVPRGTIQSRLRKPCKDLPGPEPILSNEEEGVLVQWVIDCCRKGFPKRKSDLQLSVANFLKKTGRDNPFKDDIPGKKWYDLFMRRHPELSERTVEAVTSASANVSEKDIKGWFHKIELYLKENNYLDILQDPSRVFNGDESNFQLCPKSGKVISLRGERDVYEVDHAAAKTALTVLFTFCANGDITPPLVVFPNKRLPKDITSSVPNEWGIGLSDTGWMKSELFYDYIKNVFHPYLIKRKSTFPVILFVDGHKTHLSLEVSELCSKLQIVLIALYPNATRILQPADVSAFKPLKNAWKESVLKWRRDHPLETLTKNNFVPVLKEALEVGVKDTTVINGFRTTGLCPWNSEAIDYRKCLGKGSKHDKEPKENKSNTEENSNKDRVMTHETLKNIVGQEKITFLQRTPLESLTETEKILKKICCYFENHQTDASASQESVVRIENYEADEFLHIDQFPVILAEDYVDEMQAMNTAIANKPSDNNTEDCLGSAQLVCLDSQQYLLTPVKLQDILIMEKTPERKGVKNVERSTFVLTSAEWQKTENDKLKARKLKEEEQETRKKHRLLKQEEKNNAKVVTTRNKINKKAKETIATKKQETRELRKLVKEMKTELVTLWTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -