Basic Information

Insect: Hylaea fasciaria
Gene Symbol: -
Assembly: GCA_905147375.1
Location: LR990195.1:4238110-4245913[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.4 27 5.6 3.4 1 23 84 107 84 107 0.97

2 19 4 2.7e+02 2.5 3.9 1 23 197 219 197 219 0.97

3 19 0.0016 0.1 13.2 1.0 2 23 225 246 224 246 0.97

4 19 1.9 1.3e+02 3.5 1.5 1 23 252 274 252 275 0.94

5 19 0.16 11 6.9 3.4 2 22 509 529 508 529 0.95

6 19 4.5 3e+02 2.4 0.4 1 20 627 646 627 649 0.70

7 19 0.49 33 5.4 0.4 2 23 783 804 782 804 0.96

8 19 0.21 14 6.5 0.8 3 23 885 905 884 905 0.98

9 19 0.032 2.1 9.1 0.5 1 23 913 935 913 935 0.97

10 19 0.11 7.5 7.4 3.4 1 23 975 997 975 997 0.95

11 19 0.00022 0.015 15.9 4.0 1 23 1005 1027 1005 1027 0.99

12 19 0.079 5.3 7.9 0.7 1 23 1181 1203 1181 1203 0.97

13 19 2.1 1.4e+02 3.4 0.1 2 23 1210 1231 1209 1231 0.93

14 19 0.0073 0.49 11.1 1.6 1 23 1295 1317 1295 1317 0.95

15 19 0.013 0.87 10.3 0.9 1 23 1323 1345 1323 1345 0.95

16 19 0.0061 0.41 11.4 2.6 1 23 1435 1457 1435 1457 0.97

17 19 0.00015 0.01 16.4 1.4 1 23 1463 1485 1463 1485 0.99

18 19 0.29 19 6.1 2.0 1 23 1577 1599 1577 1599 0.96

19 19 0.0027 0.18 12.5 3.7 1 23 1610 1632 1610 1632 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.4	27	5.6	3.4	1	23	84	107	84	107	0.97
2	19	4	2.7e+02	2.5	3.9	1	23	197	219	197	219	0.97
3	19	0.0016	0.1	13.2	1.0	2	23	225	246	224	246	0.97
4	19	1.9	1.3e+02	3.5	1.5	1	23	252	274	252	275	0.94
5	19	0.16	11	6.9	3.4	2	22	509	529	508	529	0.95
6	19	4.5	3e+02	2.4	0.4	1	20	627	646	627	649	0.70
7	19	0.49	33	5.4	0.4	2	23	783	804	782	804	0.96
8	19	0.21	14	6.5	0.8	3	23	885	905	884	905	0.98
9	19	0.032	2.1	9.1	0.5	1	23	913	935	913	935	0.97
10	19	0.11	7.5	7.4	3.4	1	23	975	997	975	997	0.95
11	19	0.00022	0.015	15.9	4.0	1	23	1005	1027	1005	1027	0.99
12	19	0.079	5.3	7.9	0.7	1	23	1181	1203	1181	1203	0.97
13	19	2.1	1.4e+02	3.4	0.1	2	23	1210	1231	1209	1231	0.93
14	19	0.0073	0.49	11.1	1.6	1	23	1295	1317	1295	1317	0.95
15	19	0.013	0.87	10.3	0.9	1	23	1323	1345	1323	1345	0.95
16	19	0.0061	0.41	11.4	2.6	1	23	1435	1457	1435	1457	0.97
17	19	0.00015	0.01	16.4	1.4	1	23	1463	1485	1463	1485	0.99
18	19	0.29	19	6.1	2.0	1	23	1577	1599	1577	1599	0.96
19	19	0.0027	0.18	12.5	3.7	1	23	1610	1632	1610	1632	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGTCGCTGAGCGCGCAAGTCGGCGAGGTCAAAGCTATCGCGCGCCCCCTCGAAGGCCGGCTTTGCGTGGACGTCCACTCGGAGGCCTCGTCCGACGCGCCTGAAGATTTAGATTTGCCGCACTGCAAGATAAGGAGGAATTATAACTGTGCGAAGTGCACGTTTTATACGCAGAACCCGCGCGCTTATCTCTTGCACACTCGCGACGTTCACTTTGGAAGATTCAAGATCTACGACTGTCAACTTTGTTTATATGCCTCGCGACATCACCAGAAGCTCTTGAGACATATCAAGATGGTACATGGAGGATCCACCGCGCCTCCCGCCCCGATCGCTAGAATGGAAGTGGAACCACCCGCTAAAGTGGAGATTCAACCTTACGCTACGGTGGAACCCGACCCTCCCGCTCCCGCTAGTCCCTCGGACAACATCGAGAGAATGGAAGATTTGCTCGAAGAGATCGAAGAATGCGAAGACATGATGGACGAGGAAGAAGACCAGTCCGAGCGGATAGACGACGACGACATGAGGGGCGCCACGTCTTCGGGACACAAAGGAAAGGGCAAATTCTTCTCATGCGACAAATGCAACTATGTGACCCACATAAAAGCGAGATACACGAAGCACGTTAAGTACCACTCGATGCCGATGATCAAGTGCACAATGTGCGACTTCCGCACTCCATACAAATGGAATTTGGATCGTCACATGAAGAATCACGGCGGGACCGGGAGCTTCGTGTGCTCGAAATGCACCTTCACGGCGGACATCAAGCAGAGTTTGACCGTGCACGAAATGAATCATCACACGCCGCCGGTGGGGCACGTCGCGAGCCGCCGCCGCAACCGGGTGGGCGCCAGTGACTTGACGGCCGCCGACCCGATGGGCGCGCTGCTCCGCAAGGAGGAGGAAGGGAGCGGCGACTCGCACTCCTCACACTCGGCTTCGGATATTATGGGATTACAATACGCAGAAAGAGAAGTCAGCTGCAACAGCGACTCAAATGATGCGAGTTCATCGCACACCGAGTCAAACAGAGATGGATCACGCGACGCCCCCGGCCAGCACTCGCCTAACTCCGTGAGCGACGACCCGAAGTCACAAAAACAGAGCCGGAAGGCCCCCCGGCCAATACCGCAACTCATCCCGCTGAACGCGTCAACTCCCAATCAAAAAACATCCGGCGAGCCGCCGGCGAAGAAATTCAAAGAATCCACAAGCTCAGATCTTTTCGGAAAATTAGAAAACCTATCGGAAGACATCACTTTGATACCCGTTAACAATATCCCAGCCAAAGAGACGACAGTACGCAAGAAAAATCATTCCTTTTTCGACAAATTAAAAGAGAGACTCTTGACAGAAACGGGTGAAGAAGGATCCCTGAAGTGCAAAGACTGTGGTTTTGAAAGCAAATGCCTGTCAGAACATTCCGTACATGAAAAAACTTGCACGTCTCAGTCTAACCGCATACCAATGAACACGGCGCATCCAACTACGGGCTCTACTCGTTGCCAAAACTGTAGACATAGATGTAAATCTAGTGCGGATTTGTACGTGCACATGCAAACTTGTGGGAAGAAAGATAATGTTTCTTCTGACAATGTTACCGACGCTAAATGTAACAACCAAGCGTCGACATCGCAATCGGAAAAAGAAGCGGAACCTCACCCGATGGAGAACGTTGTTTTCGTCTGGAATAACATCAACCAGGAGACCAATAAATTCGACAGACCTTTAGATATCAACATCAACGATGATGCAACACTTACAGACCTAAATAGACATTACGACACTGAAACCGTGGACGAAAATGAAGGCATGAACTTATCACCAAACAGCGTAAGCCTCGGCAAGAACGTATACAAATGTCCCGATTGCAAATTCTGGGCTGCCACGGCTTCGAGATTTCATGTGCATATTGTTGGTCATTTGAATAAAAAGCCGTTCGAATGTTCGCTATGCAAATACAAATCAAATTGGCGTTGGGATATCACCAAACACATCAAGTTGAAATCAGCTAGAGATCCGGAGCACAACGAAGCCAAGGTGCTAATGACGGATGAAACCGGCAGAAGAAACTACAGCAAGTACAACAAGTTCTTAGCCGTGCCAGTTATAAATGACGATAATGAGAACGAGTTCCACTACATAGATCCTAACACATCGATAGATGCGTCCATGGAGCCAGACGATGCATACGGCAATGAGTCGAGTGACATGATGCACGTCTCGTATGAGATGCAACCGCTCAACCTGCAGACACAACCCGCTGATAACACGATGGATAGCATAAATCAAGACCCTAAAAAACCTAAGAAAACATTGTGGAAATGCAAGAAATGCAATTACAAGGATCCTTCAAAGGAAGCGTTACTGGAGCACGTCAGACAACACTCGAAGGAAGGTGGTGTTGACGATTCCTCTCATAGTAACAACAAGAAATTAGAAAATGCCCCCGATCCTGCGGATTTGGCGTACCGCTGCGGACATTGCAATCAGCTTTCCAACTGGAAACACGTCATACAGAGACACTGCCGCTTGAAGCATGACGGAATCATAAAAGTGATCACCACAGTCAAGCCCAAACCGGATCTGAGTCTAGTACCGGGCGGCGAAGAATCGTACAGTGATCTTTGCACCAAGTGTCCATTCAAAGCCAACGACAAGAAGCAGCTCCTAGACCATCTGCAACAACACCAACCCTCGCCAGATTCAATCTTCAAGTGCTACTTCTGCCCTTACTTTGTGAAAGATGAACAAGATTTGATCACACATCTCCTGTTACATGGAATAACCGACCCGGAGGATTATATCTCTAAAGCCATGGGCTGTAGGTCTCCGTTACCGGACCGAATCCTCACCGCCCCCGAAATACCGCCTCCATCGAGTAGTGCAACGAAGCGTCACAAGTGTACTGAATGCCCTTACGAAACAAACAGTAAATCTCAGTACATGTATCACGAGCAATTCCACCGGCTTCCCGCAGACACCCCCTACAAATGTCCAGAGTGTAATTACAGCGTATCTAAGAGACACTTGCTCCACCAACATCTGAGAGTCCACGGAATTCATCCGTCGGCGGACCGCAAGAAACATGAATCGGAGGCAGAATTAGAAGCCAATACACCGTGCCTAAACAAACCCGATAGCAAATCAGACGCTGCTGACGATATCCCATTCGTATGGGTGTCGGCGAGAAACGAATTCCACAAAATGTACAAATGCCGATATTGCTCTTACGTGAATTCTCAGAAATGCAAACTACCAAACCATGAAAAGATCCATTGTCTTGAATTTGAAAATAGCGACGTTATCATTTACAAATGTTTAGAGTGTAAGTTCACATGTGACGACCCCGAAAAAGGCGCTGAACATTCCAAAAAGCACGGCTTGCTGTATGGGCGCATCTACAGTTATGTGGAGGACAATCTGCCAGATGAAGAACAAATCGCTAAATTACGCAGAGTTATCGAACAAGAAAAAGCCTTAGAAGAGAAAGAAGAATCCGAAAATAAAATAATGTATTATTGTAACAAATGTCCAGCCAATTATTTCACTGAAAGTGAAATTAAAGTACACGAAAAATACCACGATCTTTCTTTGGAAAATAAATGTAAAATTTGTGATTTCTCGGTTCTAGAAGAGAATGAATTGACGGATCACATAACTGTGCATTCAGACGATTATCATATAAGAACAAACATGTACAAATTCGTTCACAACTATCACTCTCTTTATAAACCGCCTTCATTAGAATCTGTCCGTAACCCCGAATCGGAAATTACGTGGATTGCGGTAGCAAGTAAACCAATTGAACGCACGGAGACGCTTCAGAAAAAGCCAGAAAAACACACACCAAAACAATATCACTGCAAGGAATGCCCTGCTAAGTTCTTCAAGAGTTCAGCGCTATCATATCACATGGGGTTACATGGAGGAGAAGGCGAACATAAATGCAAGAAATGTAGTTATGCTGTCAAAAATGTCGGCAATTTAGCTAAACATGAAATATTACATGATATCCACAACAAGCCCTCCGCCTGTGATTACGACTCCGGCGATGATATGGATTATAAAAATATTCCGCTTTCTGGTACAGATTTGTTTCAAAGGAAGAACGAGGCTATAAAACGAGTGCTGACCGACAAAGATAAACTGGTGAAACCAAACGATCACTTTCCACCCGTACTCCAAGCCGATCCACAGTTCGGCTATCTGATGCATGGGAACCCGGAATTTATTTACCCAACGTACTTGAAAAATGGCCGCCAAAAAGAAAAACGGTACAAATGCCACAAGTGCCCATCCGCTTTCGAGAAGAGAGAGCAGTATAAAATACATTTATCACTGCATGGCTCGAAACAGAGATATAAGTGCGAACTTTGCGATTACTCCGTAAAGTATTACGCTAATTACGTACAGCATATGAGAAAACACCAGATGAATGATGAGGCTCAAGCTGAAAGACAGAAGGAGAGCAGTGGATTTGCTGAGCCCGATAGTCAAGAGGAAATAAGGAAAGAAGATAGCACGGATACCATCAAATTAGCGATTAAAACCATGCCCAAAGGTGCGCCCAAAACCGATTTCCAGCAATTCTCAATCCGAGACCAGCAAACCCTGAGGCTTATACAGCGGAGGAGATCCATGAACAGCGGTGGTAAAGACGCCTCTGCTACCGAAGCTTTGCCAGCTAAAGAACGCAAGTTGCACATGTGTCTACTGTGCCCGTACACGAACCAACGACAAGACGCTCTGAACAATCACTACCGGAGACACGATACCGCCGATATTCTCAACATTGGAAACCATAAATGCTCCTATTGTGACTTGGTCGTAGTTCAGTCACATTTTCTACGTGACCACTTGAAGACTCATTTCAGTTATCATAAAACTCTGACTCCTGAATGCTTCGTAGCTAACGAAAACGTGACGTTTACTATCAGCAAAGTAGACGACGAAAGCGGACCTCTTGATCTCAAATTGGACATGAAAAGCAAAATTATGTTTGATGAAGAAAAATTATTTGTTAATATTAAAAGTGGAGAAATTGTAGTGGAATAG
Protein Sequence: MLQQMSSSLSAQVGEVKAIARPLEGRLCVDVHSEASSDAPEDLDLPHCKIRRNYNCAKCTFYTQNPRAYLLHTRDVHFGRFKIYDCQLCLYASRHHQKLLRHIKMVHGGSTAPPAPIARMEVEPPAKVEIQPYATVEPDPPAPASPSDNIERMEDLLEEIEECEDMMDEEEDQSERIDDDDMRGATSSGHKGKGKFFSCDKCNYVTHIKARYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGTGSFVCSKCTFTADIKQSLTVHEMNHHTPPVGHVASRRRNRVGASDLTAADPMGALLRKEEEGSGDSHSSHSASDIMGLQYAEREVSCNSDSNDASSSHTESNRDGSRDAPGQHSPNSVSDDPKSQKQSRKAPRPIPQLIPLNASTPNQKTSGEPPAKKFKESTSSDLFGKLENLSEDITLIPVNNIPAKETTVRKKNHSFFDKLKERLLTETGEEGSLKCKDCGFESKCLSEHSVHEKTCTSQSNRIPMNTAHPTTGSTRCQNCRHRCKSSADLYVHMQTCGKKDNVSSDNVTDAKCNNQASTSQSEKEAEPHPMENVVFVWNNINQETNKFDRPLDININDDATLTDLNRHYDTETVDENEGMNLSPNSVSLGKNVYKCPDCKFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFLAVPVINDDNENEFHYIDPNTSIDASMEPDDAYGNESSDMMHVSYEMQPLNLQTQPADNTMDSINQDPKKPKKTLWKCKKCNYKDPSKEALLEHVRQHSKEGGVDDSSHSNNKKLENAPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKPKPDLSLVPGGEESYSDLCTKCPFKANDKKQLLDHLQQHQPSPDSIFKCYFCPYFVKDEQDLITHLLLHGITDPEDYISKAMGCRSPLPDRILTAPEIPPPSSSATKRHKCTECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIHPSADRKKHESEAELEANTPCLNKPDSKSDAADDIPFVWVSARNEFHKMYKCRYCSYVNSQKCKLPNHEKIHCLEFENSDVIIYKCLECKFTCDDPEKGAEHSKKHGLLYGRIYSYVEDNLPDEEQIAKLRRVIEQEKALEEKEESENKIMYYCNKCPANYFTESEIKVHEKYHDLSLENKCKICDFSVLEENELTDHITVHSDDYHIRTNMYKFVHNYHSLYKPPSLESVRNPESEITWIAVASKPIERTETLQKKPEKHTPKQYHCKECPAKFFKSSALSYHMGLHGGEGEHKCKKCSYAVKNVGNLAKHEILHDIHNKPSACDYDSGDDMDYKNIPLSGTDLFQRKNEAIKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERQKESSGFAEPDSQEEIRKEDSTDTIKLAIKTMPKGAPKTDFQQFSIRDQQTLRLIQRRRSMNSGGKDASATEALPAKERKLHMCLLCPYTNQRQDALNNHYRRHDTADILNIGNHKCSYCDLVVVQSHFLRDHLKTHFSYHKTLTPECFVANENVTFTISKVDDESGPLDLKLDMKSKIMFDEEKLFVNIKSGEIVVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00927143;
90% Identity: -
80% Identity: -