Hfas015717.1
Basic Information
- Insect
- Hylaea fasciaria
- Gene Symbol
- -
- Assembly
- GCA_905147375.1
- Location
- LR990220.1:1032814-1044474[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 3.6 2.4e+02 2.7 0.7 1 23 239 262 239 262 0.87 2 10 0.081 5.5 7.8 0.6 1 23 270 292 270 292 0.96 3 10 2.4 1.6e+02 3.2 0.3 1 20 1190 1209 1190 1211 0.92 4 10 0.01 0.68 10.7 1.0 2 21 1218 1237 1218 1238 0.92 5 10 0.0015 0.1 13.3 0.8 2 23 1254 1275 1253 1275 0.94 6 10 0.0023 0.15 12.7 0.1 1 23 1280 1302 1280 1302 0.97 7 10 0.0098 0.66 10.7 2.8 3 21 1313 1331 1312 1336 0.92 8 10 0.00099 0.067 13.8 0.4 2 23 1346 1368 1345 1368 0.91 9 10 0.0046 0.31 11.7 0.3 1 23 1374 1397 1374 1397 0.96 10 10 0.038 2.6 8.9 0.4 3 19 1410 1426 1408 1427 0.89
Sequence Information
- Coding Sequence
- ATGAAGGAAATCAATATAAATATCGAAGGATACAATGTCAACGGCATATGTGTCGGCTGTCTCAATTACAATCGTAAAATGTTCTACGATGACGATGTGAAAGATTGTTTCAAATTAATTGGAAATATCGACGTGCCAGATGGACTAACTATTCAAGTATGCTGGGAGTGTCTGGCCGCAGTCAAGAATATTATACGGTTCCAAAATCAAATACTGAACTCATACGATGTACTCATCGGATACTCTCGGCAGCATACATTTCTGAATTCTCCGGAGGATTTCACAAGGCATGCTTCCTCACGCCTCGTCTCCACCGCACCCGAGGTATATAACTCGGCAGACCTCAACATAGAAATTGAGGTCAAGGAGGAAGTAGGACCCGACGCTGGCTTTATAGAATTTGAATTAAAACCCAAAACTGAACCAGAGTTTCAAGAGGACACTGAGTTCTCTGAAGACCTCATCACTCAGGACCTCAACGATGGAGACAACGGATCCTCCGACGAGGACATACAGCTGTCCAAGCTGAAGAAGAAAGAGAAGAAGGTCAAAAAGAGTAAAGAGAAAAAGAAAGAAAGGCCGAAGCAAGCCACATCCAGCCGCAAACTCAAGAACCTGCCTTCAGACATAGTGGAACTGTACACCATGACCGAGGAGGAGATGTGGTCGGTGCGGGCCAGCGATGTGGCCAGCCCGGAGTTCAGTAGGCTCCGGTACAAGTGCACCGACTGCATCATAGGGTTCAACACACAGAAGCTCCAGGACTATCACCTCAACGGGAAGCATAAGCCGAAGTCCCCCTCGGCGCACCGCTGCGACGTGTGCAAGGCGTACTTCCTGACGCGAGACAACCTGGCGGCGCACCGCGCGCTGCACGCCGCCGCCTACCGCTGCGCCGCCTGCGGGCTCACCTCCGCGCTCAAGCCGCGCATGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGCTGTTCAGGTGAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGGTGAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGCTGTTCAGGTGAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGGTGAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGCTGTTCAGGTGAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGGTGAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGCTGTTCAGGTGAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGGTGAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGCTGTTCAGGTGAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGGTGAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGCTGTTCAGGTGAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGGTGAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGCTGTTCAGGTGAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGGTGAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGCTGTTCAGGTGAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGGTGACACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGCTGTTCAGGTGAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGGTGAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGCTGTTCAGGTGAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGGTGACACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGCTGTTCAGGTGAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGGTGAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGCTGTTCAGGTGAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGGTGACACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCTCTGCGCCGCCTGCGCCCAGCTGTTCAGCTGTTCAGGTGAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGGTGAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGCTGTTCAGGTGAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCGCCGCTGCGCCGCCTGCGCCCAGCTGTTCAGGTGAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGACTCTATACCCCGCTGCGGGCCCACGCCTGCGCCGCGCGCCCCGAGCCGCACCGCTGCGCCGCCTGCGCCCAGCTGTTCAGTACGAAGTCGAAGCTGCTGTACCACCGCGGCGTGTGCCAGCAGGAGCGGCCGCAGTGCGACTGCTGCGGGAAGGTGTTCGCGAACAAGATGACGCTCAAGTACCATCTTAAAATATTGCCACAGAACAAGGACGACAAGCCGAAAGAGAAACTCTACATCCCTTGCAAGGGCTGCAGCAAGGTGTTCCACTCCAAGAAGAGTTACAGAGCGCATGTCGTGATCCACGACGGCGTGGCGTACCCGTGTCCCACGTGCGGGAAGCTGTTCCAGTGGAAGCGGAACCTGGCGCGGCACGCGCGGGCGCACCGGGACGCGGCGGCGGGGGCGGCGCCCGAGTGCCGCGCCTGCGGCAAGCGGTTCGCCTCCCGAGACTGCTACAACAACCACATGCGGCTGAGCAAGCGGCACGCGGGGCCCAACACCTATGTGTGGGTTGAATGTAACTACTGCGGCAAGAAGTTCCCGACGAAATGGTGCATGGTGGACCACATAGACTGGGACCATCTCAAGCGGATCAAGTACCAATGCAGTGTCTGTTTTAAGGCATTCAAGACGGCCAAGATAATGGTGGCGCATATGAACAATATACACGAGGGAAAGAAACGGGAGGCCGAGGGGGAACATCTCTGCGACATCTGCGGGAAGTCATACAAGACGGTGAAACGGCTGAAAGGACATGTATGGGCCATGCACACTCAGAGGTCAGCGACGAAGAATTTCAAATGCAAACTCTGCGCAGCCACCTTTCTCTGGCAGACTTCTATCTACAAGCATGTGAGGATGATGCACGACAACAATAGGACCAAGCCACCTCGACCCGCACCGGTCAAGAAGCAAGACCAGTACTCGGAGACGGATCTCAACCGCATGTACTTTCAGCAGAACATCGCGGTGGGGCCGGGCGTGATGCACCAGACCGTGCCGAGTGGCCTGTAA
- Protein Sequence
- MKEININIEGYNVNGICVGCLNYNRKMFYDDDVKDCFKLIGNIDVPDGLTIQVCWECLAAVKNIIRFQNQILNSYDVLIGYSRQHTFLNSPEDFTRHASSRLVSTAPEVYNSADLNIEIEVKEEVGPDAGFIEFELKPKTEPEFQEDTEFSEDLITQDLNDGDNGSSDEDIQLSKLKKKEKKVKKSKEKKKERPKQATSSRKLKNLPSDIVELYTMTEEEMWSVRASDVASPEFSRLRYKCTDCIIGFNTQKLQDYHLNGKHKPKSPSAHRCDVCKAYFLTRDNLAAHRALHAAAYRCAACGLTSALKPRMRAHACAARPEPHRCAACAQLFSCSGETLYPAAGPRLRRAPRAAPLRRLRPAVQVRLYTPLRAHACAARPEPHRCAACAQLFSCSGETLYPAAGPRLRRAPRAAPLRRLRPAVQVRLYTPLRAHACAARPEPHRCAACAQLFSCSGETLYPAAGPRLRRAPRAAPLRRLRPAVQVRLYTPLRAHACAARPEPHRCAACAQLFSCSGETLYPAAGPRLRRAPRAAPLRRLRPAVQVRLYTPLRAHACAARPEPHRCAACAQLFSCSGETLYPAAGPRLRRAPRAAPLRRLRPAVQVRLYTPLRAHACAARPEPHRCAACAQLFSCSGETLYPAAGPRLRRAPRAAPLRRLRPAVQVRLYTPLRAHACAARPEPHRCAACAQLFSCSGETLYPAAGPRLRRAPRAAPLRRLRPAVQVRLYTPLRAHACAARPEPHRCAACAQLFSCSGETLYPAAGPRLRRAPRAAPLRRLRPAVQVTLYTPLRAHACAARPEPHRCAACAQLFSCSGETLYPAAGPRLRRAPRAAPLRRLRPAVQVRLYTPLRAHACAARPEPHRCAACAQLFSCSGETLYPAAGPRLRRAPRAAPLRRLRPAVQVTLYTPLRAHACAARPEPHRCAACAQLFSCSGETLYPAAGPRLRRAPRAAPLRRLRPAVQVRLYTPLRAHACAARPEPHRCAACAQLFSCSGETLYPAAGPRLRRAPRAAPLRRLRPAVQVTLYTPLRAHACAARPEPHLCAACAQLFSCSGETLYPAAGPRLRRAPRAAPLRRLRPAVQVRLYTPLRAHACAARPEPHRCAACAQLFSCSGETLYPAAGPRLRRAPRAAPLRRLRPAVQVRLYTPLRAHACAARPEPHRCAACAQLFRLYTPLRAHACAARPEPHRCAACAQLFSTKSKLLYHRGVCQQERPQCDCCGKVFANKMTLKYHLKILPQNKDDKPKEKLYIPCKGCSKVFHSKKSYRAHVVIHDGVAYPCPTCGKLFQWKRNLARHARAHRDAAAGAAPECRACGKRFASRDCYNNHMRLSKRHAGPNTYVWVECNYCGKKFPTKWCMVDHIDWDHLKRIKYQCSVCFKAFKTAKIMVAHMNNIHEGKKREAEGEHLCDICGKSYKTVKRLKGHVWAMHTQRSATKNFKCKLCAATFLWQTSIYKHVRMMHDNNRTKPPRPAPVKKQDQYSETDLNRMYFQQNIAVGPGVMHQTVPSGL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -