Basic Information

Gene Symbol
ZNF212
Assembly
GCA_905147375.1
Location
LR990207.1:7005181-7013890[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 1.2 78 4.2 0.7 1 12 143 154 143 157 0.89
2 11 8.5e-05 0.0057 17.2 1.5 1 23 324 346 324 346 0.98
3 11 0.023 1.6 9.5 5.6 1 23 361 383 361 383 0.99
4 11 9.7 6.5e+02 1.3 0.4 1 8 404 411 404 412 0.94
5 11 4.1e-06 0.00028 21.3 0.2 2 23 432 453 431 453 0.96
6 11 0.0072 0.49 11.1 1.6 1 23 469 491 469 491 0.96
7 11 5.8e-07 3.9e-05 24.0 4.0 1 23 497 519 497 519 0.98
8 11 0.0011 0.071 13.8 5.6 1 23 525 547 525 547 0.97
9 11 6.9e-06 0.00046 20.6 0.4 1 23 553 575 553 575 0.98
10 11 0.0005 0.033 14.8 0.3 1 23 579 601 579 601 0.98
11 11 0.00026 0.017 15.7 0.1 1 23 609 632 609 632 0.96

Sequence Information

Coding Sequence
ATGCCGATCCATACAGTACAGACTATTATATTCGAAAACACTGAAAATAATGAGTATGAATCAGAGAATTCAACAACATTGGAATATAAGCGTCTTGATGATAATTCAAATGCTGAAACCAACTCTGAATTTACTCACATAGAAATGGTAGAATCAAGTGATATGAACAAGATGCAGATAGATTTGATGAAGTGCCTACAAAACCAAGAGCTGAAACTGGTCAAAGAGGATGGAGAAAATCGCTACATTATCATATCGGGGCATGATGCAGAATTAAATCAGGAAGAAGTTGTTACAAAGCAAAGGAAAGATGGGACTGTTTCTTTTAAGTCCCTTAAAGATATTATCAAAGACGAGGACTCTGACGTGGCAGATGCAGAAACAATAGACATGACAAAGAATGATTCTACAACACTAGTGCAGGAGTACAGCTGTAGCACTTGCCAAGTGTCTTTCACATCTGTCTATGACCACATTAACAACTACCATAGTGACCAAGATGTGGTTTTGGAGGGAAATATGTCAACATTGCCTGAAGTGGAATTTGAAACAGTTGAGAGTGAGGAGTCGTCTAAAGAGAGTCAGGCACCGAGAAGAGTCATCACGGAAACTGGCGACATTGTCGAGACGCCTTTACTCGTCAATGTTAAAAGTTCTGAGTCGGAGAAAATGCAGTTAGTGCAAGACACTGCCACCAACGCTGTGCAAGCGAAGCCGCTGAAGGAGCAAGCTACTGAGAAGACTGGAAGGGGGAACAAGCGCTACGTGCAAATAGATAAACTTTGCGACAGCGTCATAAAAGATCTAAAGCAAACTGATCCAAAAATAGGTCCATGCCACAAGGTTGTTGTTGCGCCGTCGATGCTGACGCCGGAGGGGGAGAATCTGAAGATGTACAACTGCACCTGCTGCAACATGTTCAGCAGTGAACTGGCCGACTTCAGGACGCTGCCGTGTAAAGGTGCTAGATACCCGTGCAGCCAATGTTCGGTGACCTACGACAATTCGAAATCTCTATGCGCTCATATGAAAGTGCATAAGCCTAAGTCAGAGACCATTACGCCCGATTTCCCGGAGACGTACGAGTGTGAAATATGCTGCACAGTGTTCCATACTAACAAATCGTTAAAACTGCACAAAAGGATGCACGAGCCTATTAAGTCCCGTCCCATAGCCCCGCCCCGCAACTCCTCGAGCGGGGAGCGGCGCTACCGCTGCGGCGTGTGCGACAAGCTGATCCCCGACGACTACCGCGCCGTGCACGCGGCGTCGCACGACCACGACAAGATGCTCAACTGCGGCATCTGCAACAAGAAGTTCAGCTCCGCGGAGTATCTGGAGATGCACATGAACGTGCACAACCTGGAAAAAGCGCCACAAGTCAAATCAGACAAGACCTTGCCGTACAGTTGCATATACTGCGACAGAAAATTCGCGAGACCGCATGAAAAAGTGAAACACGAACGAATACACACGGGCGAGAAACCGCACGAGTGCGAGATATGCGGCAAGTCGTTTCGCGTGTCGTACTGCCTTACTCTGCACATGCGGACGCATACCGGAGCCAGGCCTTACGCCTGTCCACACTGTGACAAAAGGTTCAAAGCACACAGCGTTTACAACCATCACCTGCTAACGCATTCGGAAGTGCGAGCCTACAAGTGTCCATTCTGTCCGAAGGCGTTCAAGACCTCAGTCCAGCTGGCGGGACATAAGAACTCGCATACAAAACCTTTCTCATGTACGCAGTGTAATAGGCCGTTCGCGTCTCTGTACGCGGTCCGCATTCACACCGAAACGCACAGCCGGCAGAACAACCTCAAGTTCAAATGTTCGTTGTGCGGCGCGAGCTACGCGCGAGCCTTCGCCCTCAACGATCACGTCAAACAAGTGCACAAGAAGAACGTCGACAATGCTGATCCTTTGGCCGGACATGGTTGGGCCAAGGCTGTTACGGAAACCGACAAGGATTTAACCCAAGATATAACCGACTTGGAATTACGATCAGATGAATTCATAGTTCCTAACTAG
Protein Sequence
MPIHTVQTIIFENTENNEYESENSTTLEYKRLDDNSNAETNSEFTHIEMVESSDMNKMQIDLMKCLQNQELKLVKEDGENRYIIISGHDAELNQEEVVTKQRKDGTVSFKSLKDIIKDEDSDVADAETIDMTKNDSTTLVQEYSCSTCQVSFTSVYDHINNYHSDQDVVLEGNMSTLPEVEFETVESEESSKESQAPRRVITETGDIVETPLLVNVKSSESEKMQLVQDTATNAVQAKPLKEQATEKTGRGNKRYVQIDKLCDSVIKDLKQTDPKIGPCHKVVVAPSMLTPEGENLKMYNCTCCNMFSSELADFRTLPCKGARYPCSQCSVTYDNSKSLCAHMKVHKPKSETITPDFPETYECEICCTVFHTNKSLKLHKRMHEPIKSRPIAPPRNSSSGERRYRCGVCDKLIPDDYRAVHAASHDHDKMLNCGICNKKFSSAEYLEMHMNVHNLEKAPQVKSDKTLPYSCIYCDRKFARPHEKVKHERIHTGEKPHECEICGKSFRVSYCLTLHMRTHTGARPYACPHCDKRFKAHSVYNHHLLTHSEVRAYKCPFCPKAFKTSVQLAGHKNSHTKPFSCTQCNRPFASLYAVRIHTETHSRQNNLKFKCSLCGASYARAFALNDHVKQVHKKNVDNADPLAGHGWAKAVTETDKDLTQDITDLELRSDEFIVPN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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