Basic Information

Insect: Hylaea fasciaria
Gene Symbol: rst2
Assembly: GCA_905147375.1
Location: LR990221.1:4468341-4482489[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.34 23 5.9 0.0 3 23 130 150 128 150 0.95

2 14 5.9e-05 0.0039 17.7 1.5 1 23 250 272 250 272 0.99

3 14 3.1e-05 0.0021 18.6 0.7 1 23 278 301 278 301 0.97

4 14 0.03 2 9.2 6.0 1 23 306 329 306 329 0.93

5 14 3.4e-06 0.00023 21.6 3.8 2 23 570 591 569 591 0.97

6 14 0.00075 0.05 14.2 2.1 1 23 597 619 597 619 0.98

7 14 1.3 88 4.0 6.9 1 23 690 712 690 712 0.97

8 14 7.9 5.3e+02 1.6 0.1 2 23 719 740 718 740 0.86

9 14 0.37 25 5.7 1.2 1 22 746 767 746 767 0.92

10 14 2.8e-05 0.0019 18.7 0.5 1 23 779 801 779 801 0.96

11 14 0.00019 0.013 16.1 0.9 2 23 861 882 861 882 0.97

12 14 0.007 0.47 11.2 5.4 1 23 899 921 899 921 0.97

13 14 1.5e-06 0.0001 22.7 0.7 1 23 927 949 927 949 0.98

14 14 1e-06 7e-05 23.2 3.0 1 23 955 978 955 978 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.34	23	5.9	0.0	3	23	130	150	128	150	0.95
2	14	5.9e-05	0.0039	17.7	1.5	1	23	250	272	250	272	0.99
3	14	3.1e-05	0.0021	18.6	0.7	1	23	278	301	278	301	0.97
4	14	0.03	2	9.2	6.0	1	23	306	329	306	329	0.93
5	14	3.4e-06	0.00023	21.6	3.8	2	23	570	591	569	591	0.97
6	14	0.00075	0.05	14.2	2.1	1	23	597	619	597	619	0.98
7	14	1.3	88	4.0	6.9	1	23	690	712	690	712	0.97
8	14	7.9	5.3e+02	1.6	0.1	2	23	719	740	718	740	0.86
9	14	0.37	25	5.7	1.2	1	22	746	767	746	767	0.92
10	14	2.8e-05	0.0019	18.7	0.5	1	23	779	801	779	801	0.96
11	14	0.00019	0.013	16.1	0.9	2	23	861	882	861	882	0.97
12	14	0.007	0.47	11.2	5.4	1	23	899	921	899	921	0.97
13	14	1.5e-06	0.0001	22.7	0.7	1	23	927	949	927	949	0.98
14	14	1e-06	7e-05	23.2	3.0	1	23	955	978	955	978	0.98

Sequence Information

Coding Sequence: ATGAACAACGGCATGATGATGGACATCGATCCGCTGAGCTCATATGAAGCCCAATACGAATACCCCCTCCCCAACCCGTATTACTACCCCCTCCCTCCACACACGACCATCCCCTACCCTTGCAAAACCGACCAGCCTCCAACCTACCCCCAGACCTACCCAGAACCACCAGCCCCGGAAAATATCAACGGTTCATCTGTCGCCCAAGAAAACAATACGATAGTAAATGAAACACAACCGCCAATCGCAGAACGGGACATCAAACAGGAAATCATGGATATAATTCCCAGCGATGCGAAGACTGATAGGCGTAACAGAAAGAAGAAGGGAAAGACGAGCAATTACTGGAACAAGAAGATAACGGACAAAGACTTTGCGTTCTATGGCTGCTCCGTATGCAACATCGCCTATGTGGACCTCCAGGAGTTAGATCAGCACGTCGTCATCCACTCCAACCGGATGACGAGCTACGACTTGCGGATACAAAATATGAAGAAACGGAAACGCATTAAGAAAGAGAAGAGGAAGTTAAAGAAAGGTGCCGGAGTTAAAATGGAAGTCGAGCTGGAGATTAAACCGGAAGACGGATATATAGGTACGGAACAAGCTTCCCAATTCACCGGCGAAGACAACAAAAACGACGTCAAGAATGTCTGCACCAAACTGACAACTGAGAAACACGAGAACAGTGAGAACAACGAAAACAGTCCAGTGAACAAGAATGTTGACAACGGCTGCATCAACGTATACAAATGTTTCGGATGCAACAAACAGTTTGCGTTGAGTTATTATCTTCGGATCCATGTTAGATCGCATACTGACGAAAAGCCGTACACTTGCAGCGCGTGCGGCCAGTCCTTCATCACGGCGAGCAAGCTGAACCGGCACAACAAGCGCATCCACCTCGCCGTGCGCCACCAGTGCCGGATATGCTACAAGCACTTCAGCAGATTCGACTTGCTGGTGAAACATTTTGACAGTAAACACCCTGAGGACAAGTTGGATGGCGAACCTTACGATTATAACGCGATCCTACCGTATTTGAAAGAGCTAGAAGACCAGCTGAAAGTGGAAAAAGTTCAGGAGCCAAAGACTGAAGACTTCTGGGATATACCTCTGACCAACTTCAACATGGCTCAGGATAAAGTGGTCGCTAAACAAGAGAGTTTTTTGTCAAATGAGGAAGACAAAGTCGCATTTCTCAATCGATTTTCACGAGATTTGGTATACATCGTGATCGAAGGTGCTGAACATGCTCAGTCTAGACCGGGGCTGTCTCTCGGGCGCCGGAGCCCCCTCCCGGGGTCTGGGACAGGTTCTATCCTCGCGCGGCAGCTAGCCTGGCGCCGGGGGGGTCAAACACTGTACCAAGACTCTGGACAGGTGAAGGAAACTCCGTCGACTCTACCAGCGATTCGGAATACGCCCGTTAGAGAAGACAGCACCAAGAAACTCTACGGGGATGTCATATTACCACCAAACACTTTGTTCTACGATGAAAACAAAGACTTGAATGACAATAAGGATGCGATAGTGCCTCTCTCCACCGCTAACATAACAATAGAGGAAATTAAAATCGATATCGAGCTAAAAGAAGAAGATCCAGGCACGGACGAAGAGTACTTCCCGACGGACACGTGGGCCAAGTCGCCCTCCCCCCTGCCCCCGGCGCCCGCCCCCCACGCCCCCCGCCGCGCCCTCTCTTCGTCCTGCCACATTTGCAACAAGAAACTCAGCTCCAAAAGCTACTTGAGAGTGCATATGCGGACGCATACAGGGGAGAAACCTTTCTCGTGCTACATCTGCAACCGCGGGTTCATAACCGCGAGCAAGATGCACCGCCACGTGCTGCGGCACGACGAGTCGTGGGCAGGAAAAGAAGAGAAGAAGGTTAAAGAAGAAGGCTTGGCAGAAGTGAAGATAGAAGCTGGGACCGAAGAAAAACCTATTAAGAAGACCAAGAAGAAATCAGTCGTGGATAAGACACTTACTCCGGGAACGAAAGTGTCGCCGAAACCGAAAAAGACATTTTTCGAAAAGAAACCGAAAGTCCACAAGAAATGGCCTCACGTCTGCGAGTTCTGTCATCAAAGATTCCTCCACCTGGAAACTCTGCAAGTGCACAAGAAGTCCCACGAGGGCACCGACCTGATGAAGTGTCACTACTGCCTGGAGCCCCAGCCGGACCTGGGGGCGCTGCGGGAGCACGAGGCCTCCCATACGGGACTGAAGCCCTATCTGTGCAACCTGTGCGGGAACGGGTACAAGAAGAAATCCGTTATGTTACACCATCGCAAGACGCGCTGCAAGCCGGGCGGGGCCGACTACAAGACGTTCATCTGCGACATTTGCTCCAAGCGATACAACTCCCAGGCTAAACTGCAGCGGCACATCGTGTCCCACTCCGTGTCCCGGTACACGCTCCGGTTCGAGTGCCCGGTGTGCGCGCACATGATACTAGAAGAGAACCGCAACGAAGTCCTAGCCATGGTGCTGCAGAACGCGCGCAAGATCCCCAAGGAGCCCGGCGGCTCCGCCCCGGCCCCGGCCCCGGGCTCCGCGCCGGACGAGCGGTCCCGCGTCTGCAACATCTGCGGGCAAATCTTCCAGCACTTCTACTATCTGGAGGAGCATCTGAAGACCCACGGCTCCAAGATGGCCGTGCTGGATCTGGACCAGGAGGAGGAGAAGAAGTACACGTGCCAGGTATGCTCAAAGTCCTTCAAGCTCCACTACTACTTGAAGCTGCACAGCTACACACACACCAAAGAGAAGCCGTTCATCTGCCAACAGTGCGGCAAGGGGTTCATCACCAAGGGCAAGCTGAAGAGGCACCTGGAAACCCATCAGGGCCTGAAGAAATACCAATGTCATATATGCTACAAATACTTCACCAGGCCCAGCTACCTGAGGATCCACGTGAGAACCATCCACGGTACGCAGGATTACAACTTCAGAGACTACGGCATGCCTGTGGGACTGCCGGGTGTGGAATAG
Protein Sequence: MNNGMMMDIDPLSSYEAQYEYPLPNPYYYPLPPHTTIPYPCKTDQPPTYPQTYPEPPAPENINGSSVAQENNTIVNETQPPIAERDIKQEIMDIIPSDAKTDRRNRKKKGKTSNYWNKKITDKDFAFYGCSVCNIAYVDLQELDQHVVIHSNRMTSYDLRIQNMKKRKRIKKEKRKLKKGAGVKMEVELEIKPEDGYIGTEQASQFTGEDNKNDVKNVCTKLTTEKHENSENNENSPVNKNVDNGCINVYKCFGCNKQFALSYYLRIHVRSHTDEKPYTCSACGQSFITASKLNRHNKRIHLAVRHQCRICYKHFSRFDLLVKHFDSKHPEDKLDGEPYDYNAILPYLKELEDQLKVEKVQEPKTEDFWDIPLTNFNMAQDKVVAKQESFLSNEEDKVAFLNRFSRDLVYIVIEGAEHAQSRPGLSLGRRSPLPGSGTGSILARQLAWRRGGQTLYQDSGQVKETPSTLPAIRNTPVREDSTKKLYGDVILPPNTLFYDENKDLNDNKDAIVPLSTANITIEEIKIDIELKEEDPGTDEEYFPTDTWAKSPSPLPPAPAPHAPRRALSSSCHICNKKLSSKSYLRVHMRTHTGEKPFSCYICNRGFITASKMHRHVLRHDESWAGKEEKKVKEEGLAEVKIEAGTEEKPIKKTKKKSVVDKTLTPGTKVSPKPKKTFFEKKPKVHKKWPHVCEFCHQRFLHLETLQVHKKSHEGTDLMKCHYCLEPQPDLGALREHEASHTGLKPYLCNLCGNGYKKKSVMLHHRKTRCKPGGADYKTFICDICSKRYNSQAKLQRHIVSHSVSRYTLRFECPVCAHMILEENRNEVLAMVLQNARKIPKEPGGSAPAPAPGSAPDERSRVCNICGQIFQHFYYLEEHLKTHGSKMAVLDLDQEEEKKYTCQVCSKSFKLHYYLKLHSYTHTKEKPFICQQCGKGFITKGKLKRHLETHQGLKKYQCHICYKYFTRPSYLRIHVRTIHGTQDYNFRDYGMPVGLPGVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -