Basic Information

Insect: Hylaea fasciaria
Gene Symbol: -
Assembly: GCA_905147375.1
Location: LR990220.1:5426133-5427800[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 5.9e-07 4e-05 24.0 1.2 2 23 98 120 97 120 0.93

2 14 0.00061 0.041 14.5 0.8 2 23 127 149 126 149 0.96

3 14 0.00031 0.021 15.4 3.4 2 23 156 178 155 178 0.93

4 14 3.1e-06 0.00021 21.7 1.8 2 23 186 208 185 208 0.95

5 14 0.0011 0.071 13.8 1.1 1 23 214 237 214 237 0.95

6 14 0.00054 0.037 14.7 0.5 1 23 244 267 244 267 0.97

7 14 3.4e-06 0.00023 21.6 2.3 2 23 273 295 273 295 0.96

8 14 1e-05 0.00068 20.1 2.2 1 23 315 338 315 338 0.97

9 14 0.0022 0.15 12.8 0.8 3 23 349 370 348 370 0.91

10 14 3.5e-05 0.0023 18.4 0.6 2 23 376 398 376 398 0.97

11 14 0.24 16 6.4 2.7 2 23 406 428 405 428 0.93

12 14 6.2e-06 0.00042 20.8 2.9 1 23 433 455 433 455 0.98

13 14 0.027 1.8 9.4 2.9 1 23 461 484 461 484 0.96

14 14 1.9 1.3e+02 3.5 2.0 12 23 495 507 487 507 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	5.9e-07	4e-05	24.0	1.2	2	23	98	120	97	120	0.93
2	14	0.00061	0.041	14.5	0.8	2	23	127	149	126	149	0.96
3	14	0.00031	0.021	15.4	3.4	2	23	156	178	155	178	0.93
4	14	3.1e-06	0.00021	21.7	1.8	2	23	186	208	185	208	0.95
5	14	0.0011	0.071	13.8	1.1	1	23	214	237	214	237	0.95
6	14	0.00054	0.037	14.7	0.5	1	23	244	267	244	267	0.97
7	14	3.4e-06	0.00023	21.6	2.3	2	23	273	295	273	295	0.96
8	14	1e-05	0.00068	20.1	2.2	1	23	315	338	315	338	0.97
9	14	0.0022	0.15	12.8	0.8	3	23	349	370	348	370	0.91
10	14	3.5e-05	0.0023	18.4	0.6	2	23	376	398	376	398	0.97
11	14	0.24	16	6.4	2.7	2	23	406	428	405	428	0.93
12	14	6.2e-06	0.00042	20.8	2.9	1	23	433	455	433	455	0.98
13	14	0.027	1.8	9.4	2.9	1	23	461	484	461	484	0.96
14	14	1.9	1.3e+02	3.5	2.0	12	23	495	507	487	507	0.81

Sequence Information

Coding Sequence: ATGGAGGAAGTTTTCATAAAGAGTGAACCCGTTATAGAAATAACGGTTAAGCCTGAAATAATTACTGAAAATCTGGATTTTACAGTAAAAGATGAACCTTACGATGAAAAGAACGAGGACTGTACCACAGACACTAGTAAGAGCTCAATTTTCTTTGATAACCATGAAGTTAACTCCCTGAATACACAATATTCACTGAACATACAACAAAATGTACCAATAGAATCCCAGGGCACTTCACAAATAGACGTGATAGGAAAAGTTTATGAAAACGGCAAAATAAATAGACTTAACTGCGTCCAGTGCGGCAAGTCATTCAAAAACAGAGCAAACCTTAAAAACCACATGAAATTCGTTCACACCGAAGACCAGAATGTAGAATGTTCTGAATGCTTCCGCACATTCAAGTCAATGCTGTACCTGAGGTCTCACATGAGCTCCGTACATGCTAAGACGGAGCAAGTGACCTGCCAACACTGCCAAAAGGTGTTCATGAATAAGAAAAAGTTAAATAACCACATTTATTACACGCATCGGCAGCCCGAAGAACAAGTGAGCTGCGCTGTCTGTTCGAAGACATTCAAGAGTCATTACAATCTGAAAATTCACATGAGATACGTCCATCCGGAAGGTGAGCCACACCCGTGTGCGTTTTGCTACAAGAATTTCAAAGTGGAAATGCTGCTGCAACGGCATATGAAATGGGCACACCCAGACGACGGCCTCATCTACAAGTGTCAGGAATGCAATAAGATTCTGCCGTCTATGGACGGCTATAAAACCCACATGAAAAATGTTCACCTATTCGACAGAGCAACATGCGATATCTGTCGACGGACCTTCAAAACGAAGAAGTCCTTGGAACGCCATTTGAGGAACATCCATAACAGTAGAGAGGCTAAGGAGGACGCTCCAGAAGTAACACCGTATACACCAGCAGGTTATACATGTAAATTCTGTGAGCGATCATTCACAAACAGCACATCACTGTTTTGGCATATAGAACGATATCATGCACAAGCTCAGAACCTACCCAACAACAAGTGCATCATCTGCAATAAAGAATTCTCCGACTATGCAGCTCTACATAGACATCTCACATCGGTGCATTCCTTAGAAACTGCAACATGTAAAATCTGCATGAAAGAATTCAAATCACCCATCAACCTCCAGAATCACATACGTATCACCCACGCTCCTCCAGAAGCAACGCAGACGTGTGAAGCGTGCCAGAAAGCATTCAAATGCTCGCTGCATCTCCGCATGCATATGCTGGCTGTCCACGCCGGCGGAGAGTTCCCCTGCGACATCTGCCAAAAGACCTTCTCTTCTACCAAATACCTGAACAAACACAAGAAATCGCACATCCAATCTAGAGACTACCAGTGTGATGTATGCATGAAAATGTTCAAAAATATTAACTCGGTAAACAAGCACAAGAAACATGTTCACAACGGAGTCAAATGTTCCGTTTGTAATATTAAACAGGCTAATCTGGAAGATCATATGAGGAAGGTGCACCCGGAGTGTGGTCAAGGAAGTGATGAAATAACTTGTAGTCGATGTGACGGGAAAATTAGTAGTTCAGAGTTTAAGGACCATGTGGAGAGGTGTGAAGGACAACCGATAGTTGAAGTAACCATCAAAACGGAGGTGGAAGATACATAA
Protein Sequence: MEEVFIKSEPVIEITVKPEIITENLDFTVKDEPYDEKNEDCTTDTSKSSIFFDNHEVNSLNTQYSLNIQQNVPIESQGTSQIDVIGKVYENGKINRLNCVQCGKSFKNRANLKNHMKFVHTEDQNVECSECFRTFKSMLYLRSHMSSVHAKTEQVTCQHCQKVFMNKKKLNNHIYYTHRQPEEQVSCAVCSKTFKSHYNLKIHMRYVHPEGEPHPCAFCYKNFKVEMLLQRHMKWAHPDDGLIYKCQECNKILPSMDGYKTHMKNVHLFDRATCDICRRTFKTKKSLERHLRNIHNSREAKEDAPEVTPYTPAGYTCKFCERSFTNSTSLFWHIERYHAQAQNLPNNKCIICNKEFSDYAALHRHLTSVHSLETATCKICMKEFKSPINLQNHIRITHAPPEATQTCEACQKAFKCSLHLRMHMLAVHAGGEFPCDICQKTFSSTKYLNKHKKSHIQSRDYQCDVCMKMFKNINSVNKHKKHVHNGVKCSVCNIKQANLEDHMRKVHPECGQGSDEITCSRCDGKISSSEFKDHVERCEGQPIVEVTIKTEVEDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00818519; iTF_00055864;
90% Identity: -
80% Identity: -