Hfas017512.1
Basic Information
- Insect
- Hylaea fasciaria
- Gene Symbol
- Bcl11b
- Assembly
- GCA_905147375.1
- Location
- LR990192.1:5795334-5803047[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.0041 10 6.4 0.3 10 27 74 89 67 97 0.78 2 9 0.47 1.2e+03 -0.2 3.1 12 43 103 131 96 132 0.69 3 9 0.055 1.4e+02 2.8 2.1 15 29 151 165 142 176 0.79 4 9 0.0016 4.1 7.6 0.9 14 38 179 200 170 202 0.80 5 9 2.3e-05 0.059 13.6 1.4 16 41 215 237 209 239 0.87 6 9 0.0084 21 5.4 0.2 17 36 244 260 238 267 0.75 7 9 1.1e-05 0.028 14.6 3.6 15 40 270 292 262 295 0.84 8 9 0.00064 1.6 9.0 0.5 18 41 301 321 297 324 0.81 9 9 1.1 2.8e+03 -1.4 0.7 15 26 326 337 318 348 0.73
Sequence Information
- Coding Sequence
- ATGCCGCGGCCGCCACCGCGGGCTGCCGCAGGCTGGTCTGCGCCCGCGTTGGCCGTGCGGCGCTCGCGCGGTGTCGTGCCTGCCACTCGGTGGAGCGGCTCGGCTGGCGCCGCCGACGTGCTGCCCGTGCCGCTTACATTGCCTATGGTTCAAGCGTGCACGGCCTGCAGCGGGGTCTTCCTCTCCGAAGCGGACCTCATCAATCATCATGACGCGGACCACCCAGAGCTTTCCTTGCGGTGTAACCATTGCTCGAAGCTATTCGCTTCAGTAAGAACGGCGGCGCGCCACAGAATAGTTTGCAAACAGATCGAGAGGATGCACCGATGCACGACATGTGGCCTCAAGTTCGCGTACGAGATATCACTCAACAAGCACATACTCCGATACCATCAGGGGCAAAGCGTGTCTGTCGCGTTCTTGAACCGAAAGGCGAAAACTAACGAAAATATGAAGTATCATTGTGACACCTGCCACAAAATATTCCATAGGAAGGAAGCTCTTGGTAAACATGCCAAGCTGCATATGCCAAATCAAAAGCTCTACGAATGCGAAATCTGTCAGAGGAAGTTCAATCGCAGCGATAATTTGCGAACACATAAGAAGATCCACGACGTGAACCGCGCCAAGCCGCCGGCCAACAACTGCCTCTGCCTGTACTGCGGCCGCGGGTTCTCCAACTCCTCCAATCTGATCGTGCACATGCGCCGGCACACGGGCGAGAAGCCATACAAATGCGACTATTGTGGCAAAGGTTTCCCGAGGTCTTCTGATCTCATGGTCCATAGAAGATCGCACACCGGTGAGAAGCCCTGCGTCTGCCGCATTTGTGGAAAAGCTTTCTCCCGGAGCAACAAGCTGTCCCGCCACATGCGCGTGCACACCGGCCAGAGACCGTACAAGTGCACGTACTGTGAGAAGGCGTTCTCCCAAAGCAACGACCTCACTCTGCACATCCGCCGCCACACCGGAGACAAACCCTACGTCTGCGAAGTTTGCGGCGAGAGATTCATTCAGGGCACCGCGCTGCAGAACCACCGGCGCGCGCACGGCCACTTCCCGCCGCCGCCGCCCGACCTCGCCAGCCTCGCCGGCCAAGCGCAGGCCATCACCTACACCGTGCCCAACCTGTCCAACATCAACCTCCAGCACGAGACGCAAATGCCTAACTAG
- Protein Sequence
- MPRPPPRAAAGWSAPALAVRRSRGVVPATRWSGSAGAADVLPVPLTLPMVQACTACSGVFLSEADLINHHDADHPELSLRCNHCSKLFASVRTAARHRIVCKQIERMHRCTTCGLKFAYEISLNKHILRYHQGQSVSVAFLNRKAKTNENMKYHCDTCHKIFHRKEALGKHAKLHMPNQKLYECEICQRKFNRSDNLRTHKKIHDVNRAKPPANNCLCLYCGRGFSNSSNLIVHMRRHTGEKPYKCDYCGKGFPRSSDLMVHRRSHTGEKPCVCRICGKAFSRSNKLSRHMRVHTGQRPYKCTYCEKAFSQSNDLTLHIRRHTGDKPYVCEVCGERFIQGTALQNHRRAHGHFPPPPPDLASLAGQAQAITYTVPNLSNINLQHETQMPN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01209561;
- 90% Identity
- iTF_00818517;
- 80% Identity
- iTF_00818517;