Basic Information

Gene Symbol
F54F2.9_1
Assembly
GCA_905147375.1
Location
LR990194.1:11593292-11599386[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.9 8.5e+03 -2.9 0.0 6 19 70 83 69 88 0.80
2 3 1.2e-06 0.0017 18.6 0.0 2 31 292 325 291 342 0.89
3 3 7.9e-10 1.1e-06 28.8 0.0 2 43 372 418 371 420 0.87

Sequence Information

Coding Sequence
ATGCGTTCCGTTGTTATCTTATTGGTTACACTTGTATGTGCAGTCTCGGCGTGGGATGATGGTGATTTCGAAGTATTCGATGTTGTCGAAGAAGTCAACCAGAATTTTTATGAATTATTAGGAGTTCCACAGGACGCCTCACAATCAGAAGTTAAGGCTGCATTTAAGAAATTAACATTGAAGCTTCATCCTGATAAAAATGATTCTCCGGATGCAGATGAGCAATTCAGAAATTTGGTATCAGTTCACAATGTCCTGAAGGATCCTGGAAAAAGAGAAAAATACAATGATGTACTCAAGAATGGTCTGCCTAACTGGCGTTCAGCAGTGTACTACTACCGGCATGTGCGGAAGATGGGCCTGGCCGAGGGCTCTATCATTCTGTTCATCCTCATCACATTCGGACAGTATGCAGTCGGCTGGGCTGCATATGCCGAGAAGAGATTTACTGCTGAGCAAATCCTGAACAGCCGCGGGAAGAAGTTCGCCAAGAAGTCGGGCTTCGACGCGGGCCTGGCGGAGATCCTGGAGCAGCTGCCGCGGCCCAGCGTGCGCGACACGCTGCCCTTCCAGCTGCCGCGGCTGTGCTGGTGGCTGGCGACGGCGCTGCCGCGGGCCGTGCGGGAACTGCGCCGGAGGAAGCTGGAGCGGGAAGAGGAGATGAAGCGCCAGCTGAAGAAGGAGAAAGAGGACAGGGAGCGCGCGACGCGCGAGGCGGCGGCGGCGGCCGAGGCGAAGGAGCTGCGTGGGCTCCGCAAGCGGCGGGGCTTCGTGCCGCCCGCGCGGGACGGGGGCTGCCTGCTGGACCCGGCGGAGGAGCCCGACGGAGCGCCCGTCGCCGTGCCGGTTAAAGCTCCGCCCCCGATAAGCGGCGGTCTGTGGACCGACGACGATCTCGCCGAGCTGGTCCGACTGGTCAAGAAGTACCCGGGGGGCTCCGCGGCGCGCTGGGAGCGCATCGCGGAGGCGCTGGGGCGCGCCGTGCCGGAGGTCACGCACATGGCCGCCAAGATGAAGGAGAACTGCTACAAGGTGCCGGGGCAGGAGCCGGAGGCGCCTCTTGCGGAACTGCCAAAGAAGGTGAAGACTCGCAAGGCGGAGGAGGTGTCCGGCGGCAGCTGGTCGCAGCCGCAGCAGAAGGCGCTGGAGGCCGCGCTGGCGAAGCACCCCAAGGGCGGCGCCGGCGACCGGTGGCAGAAGATCGCGGCCGCCGTGCCGGGGAAGACGAAGGAGGAATGCATGCAGCGCTGCAAGTATCTGTCGGAGATGGTCAAGAAGCAGAAACAGAAAGAAGACAACGAGGAGCGGCTGGACGCAGAGGACACCACCAACGACGCGGACTCTCTGGAGCTGGACGATGCCGCCTAG
Protein Sequence
MRSVVILLVTLVCAVSAWDDGDFEVFDVVEEVNQNFYELLGVPQDASQSEVKAAFKKLTLKLHPDKNDSPDADEQFRNLVSVHNVLKDPGKREKYNDVLKNGLPNWRSAVYYYRHVRKMGLAEGSIILFILITFGQYAVGWAAYAEKRFTAEQILNSRGKKFAKKSGFDAGLAEILEQLPRPSVRDTLPFQLPRLCWWLATALPRAVRELRRRKLEREEEMKRQLKKEKEDRERATREAAAAAEAKELRGLRKRRGFVPPARDGGCLLDPAEEPDGAPVAVPVKAPPPISGGLWTDDDLAELVRLVKKYPGGSAARWERIAEALGRAVPEVTHMAAKMKENCYKVPGQEPEAPLAELPKKVKTRKAEEVSGGSWSQPQQKALEAALAKHPKGGAGDRWQKIAAAVPGKTKEECMQRCKYLSEMVKKQKQKEDNEERLDAEDTTNDADSLELDDAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01172314;
90% Identity
-
80% Identity
-