Hfas017928.1
Basic Information
- Insect
- Hylaea fasciaria
- Gene Symbol
- bab1
- Assembly
- GCA_905147375.1
- Location
- LR990192.1:13433118-13452207[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-17 1.6e-14 53.5 0.0 1 43 144 187 144 189 0.95 2 2 1.4 1.8e+03 -1.1 0.5 6 15 283 292 273 293 0.82
Sequence Information
- Coding Sequence
- ATGGAAACGCAGCGATATAGGAGCCGGCGCTACTGCAAGCGACCGGCGGAGACCGGAGTGGGCGAGGCGTGGCGCTACTGCAAGCGACCTGCGAGGCCCGGAGCGGCCGAGGAGTGGCCCTACTGCAAGCGACTTGCAGAGACTGGAGCGAAGCGTGAGAAATCGCGTGACGTCATCACCAGAACTTGCTCGACGACCTTCCTCCAGACGTACTGTATCTGGTGTGAGGTGTCTTCTACGCACAGTCAACAGATGTCCAAGGCGAGGATGCTGGAGAACACTCAGGCCTGGATGGGTGCTTCCACCTCGACGGCCCTGGCAGAGACGTACCAGTATCGCATGCAGTCCCTGTGGCAGCAATGCTGGAGCACCAACCAGAACATGGTGCACAACTTGCGCCTGCGAGAGCGCGGGCCCCTCAAGTCCTGGCGGCCGGAAACCATGGCCGAGGCCATCTTCTCCGTGCTGAAAGAAGGCTTGTCGCTGTCGCAAGCTGCTCGGAAATACGACATCCCATACCCGACCTTCGTGCTCTACGCCAATCGGGTCCATAACATGCTGGGCCCCAGCGCCGATGGAGGAGCAGATTTGAGACCGAAAGGACGCGGGCGGCCGCAACGCATCCTGCTAGGCGTCTGGCCCGATGACCACATCAGAGGTGTGATCCGCGCCGTGGTGTTCCGCGAGAACCACACGCCCCATACCACGCACCACCTGCGGGAGGTCGACATGCCGTTACCATACCCTGCCATCACGGATGGCGTAAACCAACCGCCGCCCGCCGTCATCGGCGGCAACGGATGCGGCAACGGACGCGAGGGGCGCATGTCGCCGAACGCCGCCGCGGCCGCTGCCGTGGCTGCGGTGGCGCACGGCCTGCGCCGCCAGATGTGCAACATGGTGGTCGCGGCGCAGCGGCCGCAGGAGCACCCGGGGCACGTGGGGCTGCCCCCGATGCCGCTCCACTCGCCGCGGCTGCAGTCGCCGCGGCTGCCGTCGCCGCTCACCGCCGGCGTCGGGCTAGAGTCGCCGCTGTGCTCGCCGGCGCCGCCCGGGCACGCGCTCGAGCCCACGCGCCCCGCGGAGCCGTTCCGACCCTTCGCCTCCCCGCGACCCGATAGCCGCTACAGCGACCACTCCACCGAGATGGGCCCGCCGAGGACTCCGATATCGCGCAACGGGCAGGGCACCTCGCCCATCGAAGCCGACCCGTCGGTGACGGATCCTACTCGCCTCGACATATGA
- Protein Sequence
- METQRYRSRRYCKRPAETGVGEAWRYCKRPARPGAAEEWPYCKRLAETGAKREKSRDVITRTCSTTFLQTYCIWCEVSSTHSQQMSKARMLENTQAWMGASTSTALAETYQYRMQSLWQQCWSTNQNMVHNLRLRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDDHIRGVIRAVVFRENHTPHTTHHLREVDMPLPYPAITDGVNQPPPAVIGGNGCGNGREGRMSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPQEHPGHVGLPPMPLHSPRLQSPRLPSPLTAGVGLESPLCSPAPPGHALEPTRPAEPFRPFASPRPDSRYSDHSTEMGPPRTPISRNGQGTSPIEADPSVTDPTRLDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -