Basic Information

Insect: Hydrotaea diabolus
Gene Symbol: grau_4
Assembly: GCA_963513945.1
Location: OY740720.1:55096114-55098024[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.75 64 5.1 2.5 2 23 254 276 253 276 0.93

2 8 0.0066 0.57 11.6 2.4 1 23 308 330 308 330 0.99

3 8 3e-05 0.0026 19.0 0.5 1 23 337 359 337 359 0.96

4 8 0.00012 0.0099 17.1 0.1 1 23 367 390 367 390 0.97

5 8 0.00086 0.074 14.4 0.4 2 23 397 418 396 418 0.95

6 8 0.0011 0.096 14.0 0.3 2 23 427 449 426 449 0.95

7 8 4.6e-08 4e-06 27.8 1.1 1 23 486 508 486 508 0.99

8 8 5.3e-05 0.0046 18.2 3.2 1 23 514 537 514 537 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.75	64	5.1	2.5	2	23	254	276	253	276	0.93
2	8	0.0066	0.57	11.6	2.4	1	23	308	330	308	330	0.99
3	8	3e-05	0.0026	19.0	0.5	1	23	337	359	337	359	0.96
4	8	0.00012	0.0099	17.1	0.1	1	23	367	390	367	390	0.97
5	8	0.00086	0.074	14.4	0.4	2	23	397	418	396	418	0.95
6	8	0.0011	0.096	14.0	0.3	2	23	427	449	426	449	0.95
7	8	4.6e-08	4e-06	27.8	1.1	1	23	486	508	486	508	0.99
8	8	5.3e-05	0.0046	18.2	3.2	1	23	514	537	514	537	0.98

Sequence Information

Coding Sequence: ATGGACTTGTGCCTGTTATGTTTGGAGTTCAAGCACGAATTGTCGGAGGGCATAGAAGTCACATCAACGCAATGGAAGGAAGAAAATATGGAGAagttaatagaaaaatatttttggccccTGaaatccATAACGTCCTTGTCATGGCTTTGCCATGATTGCTGGCAAGCTGTAAATGATTTCCATAAATTTTACAGTCGTATTGAAAAAGCTCATGGAAACTGTGTATCAATGCTTAAGACAGAATTGCTGGAGTCAAATGATGATGTGGAATTAGTTGTGCCCAATAACTCATCTTCATTGGACAAGAGTTACCATGAGAGTCAATTTGAAAAGGAATTAAGCATAAGTCCCGACGAAGAAGATAAAACACTCATTATCAAAACCGAACTTATTAACGAGATCCTTATACCAGACGCAGTAGAAGTCCCTTTGAAAATTAGACAAAAGCGTAGAGAtccactaaaaaaaactttgcctGTTAAAAATCGTAAATGTCGCAGACTGAGGAAATGCGAAAAACAGGAAGAAATACTTGAAAGTAAATCCGATGCAAATGATGACGGCCAGTCCATAGCTTCAAATCCCACCAGTAGTCCAATTGATTTTGATTATAGAAGCTCCTCAGATTCACAAAATGAATCTGATAATGATGAAAATCCAGCTGGAGCTGATTATAAGCCACGTTCAAATAGTTACTATAAGCCTCGAACTAACCGCAATGAGCTTGATGAGTTTTTAGCTAAAAACTTCAATATTACTTGTGCCATCTGTCAGGCTCCACTAAAGACATTTCATGAATTGTGCAAACACTTCGCCAAAACCCACAATGAGCGCGGCTATGTTATTTGCTgcaataagaaatttttaaagcgCAGTATTTTGGTGGATCACATTCGTTGTCATTTGAACCCTGAACATTTCAAATGCAATAGTTGCGGCAAAATTATGTCCGATCGTCGTTGTCTGGAGATGCATGCCAAGACACACGAAACGAAAGACAAACCGCATATTTGCGATATATGCGGAAAGGGCTTTGCGCTTCGGAGTGGCCTAAGGAAACACAAATTAATACATTTGTCCGATGAAGAAAAGAAATTTCCTTGTGACCAGTGCGGCAAACTCTTCGGCAACAATAACTTGCTTTCAAATCATGTCCGAGTTGTGCACCTGAACAAGTACGCTTTAATCTGTGATATTTGTGGCAAAAAAATGCGCACAAAAGATGTCTTCGAACGGCATATGTTGCAACACAATGGTGTTGTATTGCCAACCATTAGCTGTGACGTGTGCGGCCTCAAGGTGACGGATCAAAGGGGTCTCAAACGTCACAAAGATACCCAGCATCCGGAAGGAGGAAAAAAGGAATTCCCGTGTCAGTTCTGTACGGTTGTTTCACCCACTCTTAAAGCTCATAGAAAGCATGTGCAATATAAACATGAAATGGGCTATAATTTTAAGTGTACCATATGTGATAAGGCTTTCAAAAGGTCCACGTCATTAACGGAACATATGGCTACTCATACTGGCACTATTTTATATACATGCTTATATTGTCCGAAAACTTTCAATTCCAATGCCAATATGCATAGCCATCGCAAGAAAGCTCATCCCAAGGAGTGGGAGCAAGCGTTACGTGCAAAGTATTCGGGCAATTTGCCACCGAACTACAAACCAGCCGTCTTCAATTATGAACAAAATAGCGATACGATAAAATGGCAATGA
Protein Sequence: MDLCLLCLEFKHELSEGIEVTSTQWKEENMEKLIEKYFWPLKSITSLSWLCHDCWQAVNDFHKFYSRIEKAHGNCVSMLKTELLESNDDVELVVPNNSSSLDKSYHESQFEKELSISPDEEDKTLIIKTELINEILIPDAVEVPLKIRQKRRDPLKKTLPVKNRKCRRLRKCEKQEEILESKSDANDDGQSIASNPTSSPIDFDYRSSSDSQNESDNDENPAGADYKPRSNSYYKPRTNRNELDEFLAKNFNITCAICQAPLKTFHELCKHFAKTHNERGYVICCNKKFLKRSILVDHIRCHLNPEHFKCNSCGKIMSDRRCLEMHAKTHETKDKPHICDICGKGFALRSGLRKHKLIHLSDEEKKFPCDQCGKLFGNNNLLSNHVRVVHLNKYALICDICGKKMRTKDVFERHMLQHNGVVLPTISCDVCGLKVTDQRGLKRHKDTQHPEGGKKEFPCQFCTVVSPTLKAHRKHVQYKHEMGYNFKCTICDKAFKRSTSLTEHMATHTGTILYTCLYCPKTFNSNANMHSHRKKAHPKEWEQALRAKYSGNLPPNYKPAVFNYEQNSDTIKWQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00817818;
90% Identity: -
80% Identity: -