Hdia018927.1
Basic Information
- Insect
- Hydrotaea diabolus
- Gene Symbol
- -
- Assembly
- GCA_963513945.1
- Location
- OY740719.1:8581164-8583789[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.25 21 6.7 1.0 2 23 288 310 287 310 0.93 2 13 0.083 7.1 8.1 8.4 1 23 343 366 343 366 0.97 3 13 0.16 14 7.2 5.6 1 23 374 397 374 397 0.92 4 13 0.38 33 6.1 4.3 1 20 414 433 414 433 0.96 5 13 9.2e-05 0.0079 17.5 2.6 1 23 443 465 443 465 0.96 6 13 0.00086 0.074 14.4 0.8 1 23 471 494 471 494 0.97 7 13 0.0034 0.29 12.5 1.1 2 23 586 608 585 608 0.95 8 13 0.014 1.2 10.6 5.7 1 23 641 664 641 664 0.97 9 13 0.18 16 7.1 0.5 1 23 672 695 672 695 0.84 10 13 0.0002 0.017 16.4 0.5 1 20 712 731 712 731 0.96 11 13 0.00098 0.084 14.2 3.6 1 23 740 762 740 762 0.96 12 13 5.3e-05 0.0046 18.2 2.5 2 23 791 812 790 812 0.97 13 13 0.0031 0.27 12.6 0.3 1 23 818 841 818 841 0.97
Sequence Information
- Coding Sequence
- ATGGCTACAGCAACAACGAACCTCTGTCGACTGTGTGTGAATATCTGCCAAGAAGGCAAAAGCCTGTACGATGAAAATGGCCAGCAAAATCTCATGTACGAGATTACGCGCCAATATTTCCATCCTACGATTGTCAACCTGCTAGAGGCACAGCATCTCAGGGTCATTTGTTTGTTATGTTGGCGCCAGATTTGCGATTTTCGCAGCTTTCAAACGTCAGTAGAGGCGGCCCAGTTAAAGCTTAGCTTAAATGCAGATAGATATGGTGTTGAAAGGATGATAGGCCTTGGTGCTGTCTCCCTCTCCAATGAGAGCTACGACATTCACAGTGTGGCGTTGAAGACTGAAGAAGAATTTATAGCCCTAACAGAAGTGGAAACCCCGAACGCTTGCAACGAACATGAACACCAAGGCGGGATTGAAAACGATCTTGAGCTGGCGAACTCAGCAAGAGTTTGGCAAGAAGAGCCCAACCAGTTTGACCTCAGCTGCAATATCAAGGTTGAAAATCGCGAGATTACAACTGAGTTTGTAGCCCACGTAGAACCTGAATATAATCAGGCAGGCAAGTTTAAAAGTGAAGCTGTTGAAAGTTTCAGTTCGGATGATGACTTGCCTTTGTCATCTTTTGCGGACAAAGCGAAAATAATTGAAACTGCCAAAAATACCTCCATGGACCAGAACTCAAGTAATAGCTCAGAGTTGATAACTGCCCTCGAGACAAGTTCAGCCAGTTCTTCGGTCGCTTCCAAGGAACCTCCTAATACCCAAATCAACCCACCCAGAGCTCCTGTTTCTCATCCTCGTAAGACCGACCCTGAAAGTCACGATAAAATCGTAGCCTCCTGGATACCCACTATAAAGTGTGTGGCTTGCCTCGAAACCTTCACCAAATATTCCTTGTACCGCCAACATTTTCGCCAGGATCATCCCTCCGAGGAATTCCATATTTTATGCTGCAATCGCAAGTTTTTCATACAGAGCAAAATTAAAGATCACATACTCTTCCATCGCGATCCGAATACCTTTAAGTGTCATTTATGTGGCTGCTGTTATAGTAACACTCTAAGATTGAATAGTCACATGTCGAAAATGCATCCCAAAACTCAGGATCGTAAGTTTAAATGCAGCCAATGCAGTAAAGCTTTTACGACACAAAGAGCTTGCACCTACCACTACACCATGAAACATAAAAGTGCGGATCAACCGGAGCAGGAGGTACCGGCTGGCGTTGCCAAGTTCACGTGCACGGAATGCAATTACTCAACAAATTCCTCCCAATGTTTTACCCAGCACCGTTGGTACAATCACCAGCTTGAACCCAAGCACACATGCAAAATATGCGGAAAATCTTTcaaggttttaaaaaagttccGCAAACATGCTGCTGTCCACTCGACCCTGACACCGTTCTCATGCTCTTTTTGTCTCAATGTCTTCAAAACCCTCGACGCTcttaaaaatcatataaaagtGAGACATGGCGACAAAGACCAACCAAAGCCGTCTGCGAGTGCAACTACTGCTGAGCCCCAGGGTGTCCACTTAAACGTTGAGGGTCAAAACACACTTGGCCTAGTAACAAAGGCTGTTGACTCGTCAGCATCTGAAACCAGGGACACACCGGAAGACACAGCAGGGGCAATCGATGGCGAAAGGCCTTCAACATTTAAAACCGGGGAGCCTAGGCAAATGGGTGAGCAAACAAAATCGCAGCAACTTGATGATCTCGTAGCCAAATGGCTGCCTATGTTACAGTGTAACGTCTGCCCCGATACTTTTGCCTCCTTGTCGCTGTTGCAACATCATTTCCGCCAACAACATAAGCTGGATAAATTCTACATATCATGCTGTGCTCTTAAGCTAGTCCGACGCCACACCATTGAAGATCATTTTCTTCTGCACAGCAATGCCGATGCCTTTAAATGTCGCATCTGCGGGCAGCGTCATAACCACAGATCGTCTCTCCAGCAACATATGGAACGGCGACATCCGGAGACTTTTGAGACCACCTACCAGTGTACAGAATGCCGCAGAAGCTTTCTTTCTAAGGGAGGAATAGCTTATCACTACTCGGTTAGCCATAAGGGAGTGAGATACAAACCTCCGCGCGGAGAAGTTGTTCCTGTCATGCATCCGTGCAAAGAGTGCGGCAAAGTTTTCCAAAGGCTTAAAGCTTTAAATTACCATATGTGGTGCCATCGTAATAAAGCCAAGCACACGTGTAACAGCTGTGGTAAAACTTTCAAACATGTTGCCACCTTGCGTTTGCATGAGGCCAAGCATAAGCCAAAACCAACAACGAAGCCTAAACGAAAGCCCAAACCAAAACCGGAGCCTAAACCAAAACCAAAGCCAGCAGCCTTGTTAAAGTGTACCACATGTGGTAAAAAGTTTAAGGAGGACCACGAACTGAACACACACATGGCCACGCATAGAAGCAAAGGTTACTACTCGTGTCCATTTTGTCCCATGAGCTTTATTAACTTGAGCAATTCCGAACTGCATCGCAAAATGGTCCATCCCCAAGATGAAGAAACGCTGAAAGACACATCCAAATCTTAA
- Protein Sequence
- MATATTNLCRLCVNICQEGKSLYDENGQQNLMYEITRQYFHPTIVNLLEAQHLRVICLLCWRQICDFRSFQTSVEAAQLKLSLNADRYGVERMIGLGAVSLSNESYDIHSVALKTEEEFIALTEVETPNACNEHEHQGGIENDLELANSARVWQEEPNQFDLSCNIKVENREITTEFVAHVEPEYNQAGKFKSEAVESFSSDDDLPLSSFADKAKIIETAKNTSMDQNSSNSSELITALETSSASSSVASKEPPNTQINPPRAPVSHPRKTDPESHDKIVASWIPTIKCVACLETFTKYSLYRQHFRQDHPSEEFHILCCNRKFFIQSKIKDHILFHRDPNTFKCHLCGCCYSNTLRLNSHMSKMHPKTQDRKFKCSQCSKAFTTQRACTYHYTMKHKSADQPEQEVPAGVAKFTCTECNYSTNSSQCFTQHRWYNHQLEPKHTCKICGKSFKVLKKFRKHAAVHSTLTPFSCSFCLNVFKTLDALKNHIKVRHGDKDQPKPSASATTAEPQGVHLNVEGQNTLGLVTKAVDSSASETRDTPEDTAGAIDGERPSTFKTGEPRQMGEQTKSQQLDDLVAKWLPMLQCNVCPDTFASLSLLQHHFRQQHKLDKFYISCCALKLVRRHTIEDHFLLHSNADAFKCRICGQRHNHRSSLQQHMERRHPETFETTYQCTECRRSFLSKGGIAYHYSVSHKGVRYKPPRGEVVPVMHPCKECGKVFQRLKALNYHMWCHRNKAKHTCNSCGKTFKHVATLRLHEAKHKPKPTTKPKRKPKPKPEPKPKPKPAALLKCTTCGKKFKEDHELNTHMATHRSKGYYSCPFCPMSFINLSNSELHRKMVHPQDEETLKDTSKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00817829;
- 90% Identity
- -
- 80% Identity
- -