Hdia022800.1
Basic Information
- Insect
- Hydrotaea diabolus
- Gene Symbol
- -
- Assembly
- GCA_963513945.1
- Location
- OY740719.1:160672459-160681522[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.003 0.26 12.7 1.9 2 23 401 422 400 422 0.96 2 10 0.00092 0.079 14.3 1.8 1 23 428 452 428 452 0.96 3 10 3.7 3.2e+02 3.0 0.7 1 23 459 484 459 484 0.85 4 10 0.00033 0.029 15.7 0.2 1 23 493 515 493 515 0.96 5 10 0.003 0.26 12.7 0.6 1 23 553 575 553 575 0.97 6 10 5.1e-05 0.0044 18.3 0.1 1 23 581 604 581 604 0.97 7 10 0.1 8.9 7.8 4.3 1 23 617 639 617 639 0.97 8 10 1.3e-05 0.0011 20.1 1.9 3 23 648 668 646 668 0.97 9 10 3.1e-05 0.0026 19.0 2.4 1 23 673 695 673 695 0.97 10 10 6.9e-05 0.0059 17.8 0.6 1 23 702 724 702 724 0.99
Sequence Information
- Coding Sequence
- atgtctGTCCACGATTTGTTTAACGAAAAGCTTATAGAGGAagtgaaaaaatatgaattcaTATATAATATGGCATATCGCGATCGCCGAAAAGGCACAATATCGGAGGAAAAATGGTCGGAAATAGCTACAGCTGTCAACGGTACAGTCAAGAAATGTAAGAGTCGCTGGAGTAATCTGCGGCGGCGGTATACAATTGAATATACTAAAATGACCTCGAATGAGGATGGTGAATATGAATCTAAATGGAAGCACATGGATGCAATGTCCTTTATGGAAGGTTACATGGGACAAGATGAgcATTTTTTGGAAAACCTTTCGAAATTGTCGAAAAGAGACTTGTACTGTCGGACTTGTTTGCGTCCGGTCACGAACGAATTTGAGACGAACTCCGACTGCCACAACATATTTGGAGCCGAGAATTTTGCGGAAAAGTTAATGCAGTGCACTAACTTAAATATTGTTCCATGGGATAAATATCCACATTCGTTATGTAAAAAGTGTTACGAAAAGGTATGGGACTTCTGTCGATTTCAAGATATGTGCCGTGAATCTATGGAGAAGTTCAACGTTATGCTGGAAAAACAACCAGATGTCAGGGATGAAAATCATGAAGAGGAAATTGCAGACAGCTTTGTAGACTCTATAATAGAGTATACAGATGTCGATTATCTTGTTACAGAAGAACAGCCGGATGAAAATAGTACATCAGTCGGTCAAGTTCAATACATAAAAGAAGATCCCGACCAGGACACAGAAATTGAATGCCAAAATAAAATAGAGATAGCTGTGGTCGTTGATCCTTTGGAAAAGAATTCAAGAACGGATTTGGTTTCGGAGGAAGAACAAGTAGATGAGAATACTACAGAGCTTACCGAGACCTGCGAAGATGAAGAAGGtggcgcaatttttaaatcaaagagGTCACTGACGAACAAATCTGCTAGCAAAGAAAACTATCATAAGGATATATCGAACCAATCGGAACTATTAGATGACTTTTCCAGAAATAGTGCAGAAATGAACATTGAAGAGGAGCCAATAGACATCAAAGTAGAAGATCATTTAGAAAGTGGCGAGGATGAAATTGATGAAGATAATGATGCAAAACTGGAAAGTCAATCCGATGATGAAAATTCTGTTTTAGATGATACCAAGGCTCCAGACGTTATAGAAAAAACACGAAGCAAATATCCACTTAACTGTGACATGTGCCCGAAATCTTTTCTTTATTCACATCGTCTGGAAGCGCACCAGCGAAAACATAGGGGCTTGCCAGAATTTCCATGTACGTTTGCAAATTGTTCACGAGCTTTCCGACGTTTGACTGATCTGAGACATCATCTCAATGACCATAATGGCATCCCCAATATCTATAAATGTGACATCGAAAATTGCGACGCAATGTTTCCTAGCATGCACTTACGATACCAACATAAGGTTAAAGTTCATAGAGACAAGAAAGAAGCAAAGACCTACACCTGTGATACGTGCGGTAAAGTAATAACGACTCTGCCTTCACTCAAGGCCCATCGTTATCTTCATGTTGATAAATCCCTATGGCCCTATGGTTGCGATATAGAGGGCTGCACCGATAGATTCCGATTTttaatgcaaaagaaaacacATTTAAAGCGTCATGCCGGTATAAAGAACTATATTTGTCCCCATTGTGGCATGCGAAAAACCACAAGCACGGAACTGAGCATACACATCAATTTACAcacattcgaaaaaaaatatcccTGTCGTATTTGCCCGAAAGTGTTCAAAAGTGTAGGATCCATGAGCACGCACATTCGTGTGGTTCACGAAGGAAAGCCAAGAAAGCCTACAAGCGTAGGAACTTTTCAGTGTAGCTATTGTGATCGCAAGTTGTGCACAGCTATGAACAAGAAATATCATGAAATGTCTCATACGGGAGAAAAAAAGCCTTACGGGTGTGACGAGTGTGATAAAACGTTCGAGTCGCCTTCAATGCTAAAGCATCATAAGAATAAGCACGGTGATAAACAGTACGATTGTAAGATATGCGGTAAACGATTCAAATGGCAGAGTCATTTAAAGACACATGTAATGTTACATTCTGAAGAAGGGAATCCGTATAAGTGCGAGGAGTGTGGCAAAGAATTCAGATGGCCTGCATCTCTCTACACTCACAAGAAAACCCACGAGAAAGAGAAAATTAAGCaggaaataaaagaagaacCAAATGCCAATTTGGATCTTTAG
- Protein Sequence
- MSVHDLFNEKLIEEVKKYEFIYNMAYRDRRKGTISEEKWSEIATAVNGTVKKCKSRWSNLRRRYTIEYTKMTSNEDGEYESKWKHMDAMSFMEGYMGQDEHFLENLSKLSKRDLYCRTCLRPVTNEFETNSDCHNIFGAENFAEKLMQCTNLNIVPWDKYPHSLCKKCYEKVWDFCRFQDMCRESMEKFNVMLEKQPDVRDENHEEEIADSFVDSIIEYTDVDYLVTEEQPDENSTSVGQVQYIKEDPDQDTEIECQNKIEIAVVVDPLEKNSRTDLVSEEEQVDENTTELTETCEDEEGGAIFKSKRSLTNKSASKENYHKDISNQSELLDDFSRNSAEMNIEEEPIDIKVEDHLESGEDEIDEDNDAKLESQSDDENSVLDDTKAPDVIEKTRSKYPLNCDMCPKSFLYSHRLEAHQRKHRGLPEFPCTFANCSRAFRRLTDLRHHLNDHNGIPNIYKCDIENCDAMFPSMHLRYQHKVKVHRDKKEAKTYTCDTCGKVITTLPSLKAHRYLHVDKSLWPYGCDIEGCTDRFRFLMQKKTHLKRHAGIKNYICPHCGMRKTTSTELSIHINLHTFEKKYPCRICPKVFKSVGSMSTHIRVVHEGKPRKPTSVGTFQCSYCDRKLCTAMNKKYHEMSHTGEKKPYGCDECDKTFESPSMLKHHKNKHGDKQYDCKICGKRFKWQSHLKTHVMLHSEEGNPYKCEECGKEFRWPASLYTHKKTHEKEKIKQEIKEEPNANLDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -