Hdia018908.1
Basic Information
- Insect
- Hydrotaea diabolus
- Gene Symbol
- -
- Assembly
- GCA_963513945.1
- Location
- OY740719.1:8429154-8433378[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.0021 0.18 13.2 5.4 1 23 347 370 347 370 0.98 2 15 0.00021 0.018 16.3 5.1 1 23 554 577 554 577 0.98 3 15 0.0079 0.68 11.4 3.4 1 23 745 768 745 768 0.98 4 15 0.16 13 7.3 3.5 1 23 814 836 814 837 0.95 5 15 0.072 6.2 8.3 6.0 1 19 848 866 848 871 0.92 6 15 0.0012 0.099 14.0 1.0 1 20 877 896 877 897 0.96 7 15 0.0014 0.12 13.7 3.5 1 23 988 1011 988 1011 0.96 8 15 0.085 7.3 8.1 4.8 2 23 1033 1055 1033 1055 0.94 9 15 0.037 3.2 9.2 5.6 1 23 1074 1097 1074 1097 0.98 10 15 0.16 14 7.2 5.4 1 23 1112 1135 1112 1135 0.98 11 15 0.00011 0.0094 17.2 0.5 1 23 1152 1175 1152 1175 0.97 12 15 0.00053 0.046 15.0 1.4 1 23 1191 1214 1191 1214 0.96 13 15 2.1e-05 0.0018 19.5 4.4 1 23 1234 1257 1234 1257 0.93 14 15 1.2 99 4.5 2.2 2 11 1266 1275 1265 1282 0.79 15 15 0.0011 0.099 14.0 0.1 2 23 1328 1349 1327 1349 0.95
Sequence Information
- Coding Sequence
- ATGCCGGCGTCAAACATTTGCCGTTTGTGCTTCAAGGAGGGTGTTGATGTTAAAAACCTCTACCATGGCAATGGTCAGCCCACTGAGCTGTTTAAAATGACACATGGATATTTCCATCCCAAGattataaacATGGAAGAAGCAAAACATCTCACTGTCCTTTGCCAAGTCTGCTTTCGCCACATTTATGACTTCCACAGTTTCCAAGCGTTTGTGAGCGTGGCCCAATTGAAGCTTCTCGAAGATCGCACCGAGGCGAGAGAAGCTGTAAAAGTGGAACAAGACGTTGAAATCTGGAATGAAGTTGAAAATCCAAATCTTTCAAATGTCAATGCCATCAAGttggaaaaagaaaacagtTCTATGTCCTTCGAAGAAGTATTGGTTGATACTGACGATGACATGGAGCTAACAGCAGGTGAAGGTGTTTACTTAACGAAGAAAAAAGACCAAGATACCTTGAGATTGCCAACACCAGTGGTGGTGTTTGAAGGTGTAAGTGGTCATCAAGAGTTAATTATTGCCTTGCCCAAAGAAAATAGGACAAATAAGCAACTGAATAAAGAAGATGCTAGGGCACCGTCGTCCCCATTAACTGAAGGCAGTGGAACCAGTGGCGTGAAGAAAACGAATGTTCGAGTTGCAAATAAAGCTTCCCAGGAAGCCGTTCAAGTAGGAAAAGTAGGCCAAATTAATACGAACAAAAGCAAAGACCTGGCAAAGAATGCTCCAACGATAGGTTACCCATTTAATGGCTTGAGAAATTCTATGACCGAAATGAAAGAAACCGAAACCAGGGGCGTACCGAATATAAAACTTGAATTTGATCCAACTAATTCTGCCAACGATACCGGCTCCATCGCAACTAATGAAGGCCAAAATACTGCTGCTAATCTTAAGAATAGAAGTCGTTGCATTCCCTTGGCGTGTTCTAAGGCCGACACAGGGGAAACTCAAGTTGCAACTCACAATAAGTCCGGCTCTGGCGTACAGGTAGCCCAAACTGATGACCCATCACATGCTGACGTAAAGAAAAGGTTTGAATGCTTTCACTGCGGCATCTCTTATGTATTTAAACACACCCTACAACTGCATCTGAGAAAGAAACACGTGCCTCCTCTAAAAATGGCGATAAGAAGGGCCACTGTCTTGGCCAAAGAAGATAGGACAAAAAATCCGGTGAATAGTGAAGATTCCAATGCACAGTCGTCCTCATTGTCTAAAGACAGGGGAATTGCTCGAAAGAAATGTGAAACCAAAGGCGTGAAGAAATCGAATGTCGAGCAAGTTAAAACATCCCAGGAAACCGGCTCAGTCGGAGAAGTATTTCGTATGAATGCGGGCTTAAACAATGACCCTGTGAAGAATGCCCCAACGAAAAGTTTCCCATTTAATTGCTTAGCAAATGCTACGATCAAAGAGCAAGGCAGTGAAGCAATTGGGGTGCCGAAAATTAATCTTGACACTGAGCCAATTAAGGCCGGCTCCATCGAAGCTAATGAAGGCCGAACTATTGACGTAGCTTATGCTAATCTAAAGAATGGATGTCAGGCAGTTAGCTCAAGGGCAACCGAAGTTGCAACTCATTCTAAAAAAGCCTTGAACGAGACCGGCTCGGGCGTTCATGTATCCCAAACTGATGCCGATGTCAAGAAAAGATTTAAATGCAGCCAATGCGGCAAGTCGTACGTATTTAAACATACCCTACAACTGCATCTGAAGAGAAAACACGTGCCTCCTCTAAAGATGGTAATAAGAAAGGCCACTGCCTTAGCCAAAGGAAATGGGGCAAATGGTGAAGATTCTAGCGCACAGTCGTCTCCAAGAGCTAAAGACAGTGAAATTGCTGGAATGAATGGTGCAACCAGGGGCGTGAAGAAGACTAATGTGGTTCGGGTTAAAGCTGCCCAGGAATCTGAGTCAATCGAAAAATTAACTTCTCcggtcaaaaagaaaaaaaccgaaGCCAAGGGTGTGTTGGAAATTAAACCTGAAACTCATCCAACTGAAATTTTCCAAGATTCCTGTTCCGTGGAAACAAATgagggtaaaaacaaaactgttgACGACGCAGCCAATGCTGATCTGAAGAATAAAAGTCAGTGTACACCCACCAAAAACGCTGGAGATACCCCAGTTGCAACTCAGTCTAAAGTAGCCTCTAACGAGTTTGTTTCTGGCCTTCATGAGTCCCAAAATGATGACTCCGGAAAGGCTAATGTTGAGAAAAGATTTCAATGCAATTATTGCAGCAACTCTTACGTCTTTAAGCAAACGCTACAAATGCATCTGAAGAGGAAACACATACCAGCTCAAATCCAGGTCAGAAGAAAATCCCATCGCCTATCCATAACACAACCAATTTCACCCGAGAAGTCTGCAGACGAACGTAATGCTTTGCCAAATCTCGAATGCGATTTCAAGGGCAAAACGAAAAGGTTCAAGTGTTCATTTTGCGAAAAATCTTATGCGCTCAAGAATCGCTTGTTGCTGCACACAGAGCGACACCATTGGAAGACGCACCGGAAAAATGAGGCAACTCATGCGTGCACAAAGTGCAAAAGAAAGTTCAGCAGCAAAGATAAATTGGAGACGCACTGTGAACTCTTTCATCCCCAAGCCGGAGTGTACACTTGCAACGGATGTGACAAAACGTGCACCGAATGGGAAACCTTTCGTAACCATGTCTTGTGTTGCCAAAAGCAGCAGACAACTCAATCTCAGGCTAACTTGGAAGGAGAAAAATGCACTGTTACTAAATCCCAGTCGAGTGCTGATGAAGGCACGGAGACCACATCAACAAACGAAGCAGCAAGTGCTGTCACTACACCAACCACATCAACAACAGCAGTCCCTGCTCTAGTGTTGCAGGACCAGACTCTCGATGGGGCTGCCCCAGCTGAACTCTCTGAAGATCCCTTGCCCGCCTGCAAATTCAAGTGCGATGAAACTATAGACAAATTCAAGTGCAAGTTGTGTAACAacaacttcaaaacaaaacgCCTCCTAAAAATGCATACACGAGCTCAGCACAACATCCCTGAGCAGGTAACGAAATGCGATGGCTCTGCCTTGAGCTCCAACCAAAATGCCGCCAAGTGTGAAACCTGCGGTAATACGTTTCGATCAAAACATAGCTTAAGATTTCACTTGAAACAACAGCATCCAGGCATAAAACCCACCATGTTTAGCGCCGACTATGATGCCACAGCGAAACGCTTCAAATGTAGGCTTTGCCACATGTTGTTCTTGCGACAAACGAGCCTGACCAAGCATATGCGCCGGCGGCACAAACAGGAATTCGATTTCGACTACAACGAAACTACGCGAAAGTACAGCTGTCGAATATGTTGCCAGTCGTACAAGAAGAGTCGCCACCTGGTCAGCCATATGGAAACGCTGCATCCCGAAGTCGCCAAGAccacagccagccagccagtcgcCGAGAAGCGATTCCAGTGCAAGTCGTGCGACAAGGCTTTTGGGACGGCCCTCTCGTTACAAAGCCACATGGAACGTCAACATGGCTGGGCCGCATTTGAAAGTGTCAACGACAACGGAACAATGAGCTTCAAGTGCAACTTGTGCAACAATTCGTACTCGAGCAAATGGGTCTTGAGAAAGCACATAAGAGATCAACATTTGACGAAAACCAACATTTTATCAAATAATTTCGCTAATGACGAGACGACGAATATGTTCCAGTGCAAAGGCTGCGACCACACGTTTAAGCACAAAGCCAATCTGATGCGGCACATCGTGCAGAAGCATGACAAAATGCCTGCCTCAAataacaaatgtcaaaaatgtggCAAGTGTTTCCTCACTCAACATCGACTGGCCAAATATGAGTTCGCCACAATCACAACAGCTGAAGTGAATCAGGCGTTGCCTCCTGCCAAGAGGAGTAGCAACACATTTGGCGATCGCTTATCGCTCGGTCGCCATAAATGTCGTAGTATTGGCAGGCCGCAGTATACCCGATGTGACATTTGCGGCAAAATGTTAAAGAAGTTGTCGGCATTGCGTCTACATCTTGCGGCTCACATGCGCAATGACCAGAATCGAGCCACAACCGATGGTAGTCTTTCCAAGATCCCTCCTAGGACAACTTTGATTGAAAGCAGCGCCATGGAAGaactaaacgaaaatatttaa
- Protein Sequence
- MPASNICRLCFKEGVDVKNLYHGNGQPTELFKMTHGYFHPKIINMEEAKHLTVLCQVCFRHIYDFHSFQAFVSVAQLKLLEDRTEAREAVKVEQDVEIWNEVENPNLSNVNAIKLEKENSSMSFEEVLVDTDDDMELTAGEGVYLTKKKDQDTLRLPTPVVVFEGVSGHQELIIALPKENRTNKQLNKEDARAPSSPLTEGSGTSGVKKTNVRVANKASQEAVQVGKVGQINTNKSKDLAKNAPTIGYPFNGLRNSMTEMKETETRGVPNIKLEFDPTNSANDTGSIATNEGQNTAANLKNRSRCIPLACSKADTGETQVATHNKSGSGVQVAQTDDPSHADVKKRFECFHCGISYVFKHTLQLHLRKKHVPPLKMAIRRATVLAKEDRTKNPVNSEDSNAQSSSLSKDRGIARKKCETKGVKKSNVEQVKTSQETGSVGEVFRMNAGLNNDPVKNAPTKSFPFNCLANATIKEQGSEAIGVPKINLDTEPIKAGSIEANEGRTIDVAYANLKNGCQAVSSRATEVATHSKKALNETGSGVHVSQTDADVKKRFKCSQCGKSYVFKHTLQLHLKRKHVPPLKMVIRKATALAKGNGANGEDSSAQSSPRAKDSEIAGMNGATRGVKKTNVVRVKAAQESESIEKLTSPVKKKKTEAKGVLEIKPETHPTEIFQDSCSVETNEGKNKTVDDAANADLKNKSQCTPTKNAGDTPVATQSKVASNEFVSGLHESQNDDSGKANVEKRFQCNYCSNSYVFKQTLQMHLKRKHIPAQIQVRRKSHRLSITQPISPEKSADERNALPNLECDFKGKTKRFKCSFCEKSYALKNRLLLHTERHHWKTHRKNEATHACTKCKRKFSSKDKLETHCELFHPQAGVYTCNGCDKTCTEWETFRNHVLCCQKQQTTQSQANLEGEKCTVTKSQSSADEGTETTSTNEAASAVTTPTTSTTAVPALVLQDQTLDGAAPAELSEDPLPACKFKCDETIDKFKCKLCNNNFKTKRLLKMHTRAQHNIPEQVTKCDGSALSSNQNAAKCETCGNTFRSKHSLRFHLKQQHPGIKPTMFSADYDATAKRFKCRLCHMLFLRQTSLTKHMRRRHKQEFDFDYNETTRKYSCRICCQSYKKSRHLVSHMETLHPEVAKTTASQPVAEKRFQCKSCDKAFGTALSLQSHMERQHGWAAFESVNDNGTMSFKCNLCNNSYSSKWVLRKHIRDQHLTKTNILSNNFANDETTNMFQCKGCDHTFKHKANLMRHIVQKHDKMPASNNKCQKCGKCFLTQHRLAKYEFATITTAEVNQALPPAKRSSNTFGDRLSLGRHKCRSIGRPQYTRCDICGKMLKKLSALRLHLAAHMRNDQNRATTDGSLSKIPPRTTLIESSAMEELNENI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -