Hdia015420.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hydrotaea diabolus
Gene Symbol
RREB1
Assembly
GCA_963513945.1
Location
OY740718.1:49431157-49437477[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.0069 0.6 11.5 0.9 1 21 228 248 228 250 0.96
2 12 0.00049 0.042 15.2 0.2 1 23 260 282 260 282 0.98
3 12 3.4e-05 0.0029 18.8 7.5 1 23 288 310 288 310 0.98
4 12 0.46 40 5.8 2.6 2 19 563 580 563 580 0.97
5 12 0.012 1.1 10.8 0.1 1 23 729 751 729 751 0.97
6 12 2.8e-05 0.0024 19.1 1.2 1 23 761 783 761 783 0.99
7 12 0.0012 0.1 13.9 2.0 1 23 789 812 789 812 0.97
8 12 0.0043 0.37 12.2 2.0 1 23 1156 1179 1156 1179 0.95
9 12 0.00013 0.011 17.0 0.3 2 23 1516 1537 1515 1537 0.97
10 12 0.21 18 6.9 6.3 1 23 1543 1566 1543 1566 0.97
11 12 0.018 1.5 10.3 0.6 3 23 1744 1764 1742 1764 0.95
12 12 0.002 0.17 13.3 4.8 1 23 1770 1792 1770 1792 0.99

Sequence Information

Coding Sequence
ATGTTGGCCACACCCACACACAATGCCACCGGCGATGCTCCAGCCCATGCGAATGCCATCAAAATGGAAAGACGCGATTCGGCCACATCAGAGTCATCGCTTGAACATTTGGACTTGGGACGTACACCCAAGAAACTCAATACAGCCACTTCAACGCCCGTTTTGACCAGTGATAAGGTACATAATGTCGGCAGCGCCTTAATAGCGGCCACCACAGCACACATGGCAGTTGCCGATACGGCCAGATACTTGCAACACAAGATGCAAGACTCCGATGAGGCCAACGACTATGATGACGAAGATTCGGCGGACGAGAAGAGCGCCCCAACGCCACGCCAACAAATGCATCATAAGCGTCGCCTAGCCGGACGAAACCTGCTGGATAAACGTACCAGCGTTCACATTGAATACAATCCCGATAATCCCAATTCGTTGCGTAAGAAATTCCGTTTCAATCGCAGCTCCGTCGATTACGGCAATGAATCGGGCTTTGTCGATGCCAGCAATAGTCAATTGTTGAACAGCAGCGCAGCAACGCCGGCGGCAACAAATCCCCATGCCAATGGCAGCAACAATAATGGCTCGAAATCGAATAGCTCATCGGCCGCCTCTACTCCGCCACATCAGCAAAGCAACGGTGGCAATTCGAGTGCGGATTCAGCGCCGGGTGAGGATATGAAATATGTCTGTCCCATCTGTGAAGTGGTGTCGGCAACGCCGCACCAGTTTACAAATCATATACGTTGTCACAATTACACCTCAGGGAATACGGAGAATTTTACATGCCGTATTTGCTCAAAGGTACTCTCATCTGCCTCATCACTGGATCGTCACGTTCTGGTGCACACCGGTGAAAGACCATTCAATTGTAAATATTGTCATCTCACTTTTACCACAAATGGCAACATGCACCGACACATGCGCACCCACAAACAGCATCAGTCAACCCATCATCGTCGCAACTCGAATGGAACAAAGTTCAACTCCAACAACACAACATCTGGTGTAGCTAAAACAACACTAGCGGCggcgacagcagcagcaacaaccgcCAACACAGCAACGCCATTAAGCAATGGACAATTAAGTGAAGGCGTTAAATTATCAGGCGAGTCAACAGCAATTAGAGCAGCGGCGGCAGCAGCTGCTGCGTTAGATTTGGCGTCTGACAACGATAATCACGGTGTGGCATCAGCGATTAATGCGTCGACAACAGGTGCTAATGACAAACGATTAAATGGTAACGCTGACGCTCCAGCCATAGAAagttatgaaagtgatggtggcTGCTCCACCGACACCTCCACGGGTCACAACACCCACAGAaaccataacaacaacaataataacgacatgaaaattaacaataataacTACAAACGAAAGCTTAGCGATGATGATCGCGATCCCCAGCAGCACCAACATCGTCATCATGAAATTGCCAACAGATCTGAAGAGTTGCTGAAGCAACACTTGAAGGCTGTCACCAACTCCGTTCATGCCCCCGTACCCGCCGTCAACACCACCATCAACAATAACGACATCACCCGAGAAGATCACGAACTATCATCGGTTAATAAAACAAACTGCGAATCATTGATATGCCCTGTTTGCAACGACGATGAGTTTGCCGATGTCTTGGCTTTGGACCAGCACATGGATGCCAAACACCCTGAAATACCAGCCAAATGCACTCACTGTGAGGTTATTTTCCGTTCTCACCACCAGCTCAGTATACATCCTTGCTCTGCGGATATCAAGCCCCAAGAATACGCCGAATCCTTCACTGTTCGGCACAGACGCTTCAGTGAAAGTTCTGTGGGTCCTGCTCTAGAGGAAGAACGCGAATGCGAACGTGAAGAGCACCGTCGAAGACAGGAGCTTTTCCAtcatttggaattaaaaaacatgcTCACCCATTCCAATTCCTCCTCATCCCATCATAATGTTGAACTGACCGAAGATGACATCAAATCGGAACCTTCGGCTGGCCACGACTCCAAAGATTTGGCTGATATTCAATCGATTTTGAATATGACCTCATCGTCGAATACTTCGAATTTTCTCAAGAACTTTGAACAGTCAGTGAACACACCCTCCTCCCAGTACAGCTACGATAGAGACGAAGAGGAAGCCCAAGATGTTTTCACCGCCGAGTTCCGCAAAATGAAGTTGCGCGGTGAGTTCCCCTGCAAGCTGTGCACAGCGGTCTTTCCCAATCTCAGAGCGCTCAAAGGACACAATCGCGTTCATTTGAGTGAAGTGGGTCCAGCGGGTCCTTTCCGTTGCAACATGTGCCCCTACTCGATTTGTGATAAGGCCGCTCTTGTCCGCCATATGCGTACGCACAACGGTGACAGACCCTATGAATGTGCCGTCTGCAATTATGCCTTCACGACCAAAGCCAACTGTGAGCGTCACTTGCGCAATCGCCATGCCAAAACGACCAGAGATGAAGTTAAACGTGCCATTATTTATCATCCCTCCGAAGATTCCAGTTGTGATGATCCAACGAAGAAACTACACCTGTTTTCTTCGCCCGAAATGGATGATGACAGCGAATATTATCACCAGCCTCATCCCAAAGATCGATCAACGCCAGTGTCCCATCTCAAGGAGATGCTGACTTCGGGAGAAAGTCTCTCTTCGAAACCAGTCAAAATCCAAGTAAAGAACCTCAACGAACTTCTCGACAAGTCTTCGGCCTCATCGGGCTACAACGACAGTTACGACAAACGTCACACCGAAGCATCGTCGTCGGCTGCTCCCATTGACATGAGCATGGATGTTTTGGATTTAAGCAAGAAACCCCCTAATACAAACGCACAAAAGCCCGATGAGCCGAAAGTGGATGCACCCCTTCCACTCGTCCACAAAGAGGAGAAGATTCCCACAGTTGTGCCCAACGGTGCTAATGCTGATGAGCCCAAGACAGATGTGTCTTCATTAgagaaacaacagcaacagtttCTCATGGCCCAACAGCCACAATGGCTCAACGATACAGCCCAGTACTTGCAGCAATTATACCGTAATTTACTCTTTCCCCAACTAAATCCGTTCCTGATTCCCAACTCTCCATTTATGCCCAACAACATGGCTGATTTTCAGAAATTGGCTCCATTCTTCAGATCAATGTTGAACGCATCCGGAGCTTCGTTGCCTGCCGGTGACTTGGACAAAGTGATAAATCCAACCCCACCATCCACTTTGCCACCCATAAGTCCCATGATGTCGGAAAAATCGAGTACCCCTTCTATGGTCTCCATGTCGTCGCCCAAGAGTTTGCTGTCACCCAATCCCAGCCATCTCAGCATACCTAGACACGTTGGTAATCCATCGTTGCCATCACAACCTCCGCACTTGCCACCCACCATGCTGTCGAATGGGCCTGTCAAAATGGTTTTGAAGAACGGTGTCTTTATGCCCAAACAGAAGCAGCGACGTTATCGCACTGAACGTCCCTTCGCCTGCGAACATTGCTCGGCTCGCTTCACACTGAGATCCAACATGGAACGGCATGTCAAGCAACAACATCCCCAGTACTATGCTCAACGTCAACGCAGCGGTCACCATGTGATGCGAGGACGCGGTGCCAGCAGTGCAGCCCACATGAACGGCATACCACATTTGCAAGCTGCCGTAGCACAGGCTCATTATGGTTCCAATCCCAGCTCCATGACCAGTCATTCACCCATTTCGGATCAAGTGAAGTACGCAATATTGGCTCAACAACTGAAGGCTCGCAAGGATCCTGATCTTTTGCAGCAAGCTTTGGTGCATGGTTCAAATAGTGTTGCCAACTCCAGTATGTTTGCTGGTCACATGAGTGGCCATAGCAACGGTCAATCGTCTCATTCGTACACCAACTATTCGAGCCAGCACCTAAGTCAAAATGGTACACCCAATGGTTCAATGGAGGACGATGAGCCCAAACTTGTCATCGATGAAGATGAGGACGAAGACGATGAAGATGAAGATGATGTCGAGGAAATTCATGACGATCAAGATGACGAATACGATCACGATGACATACAGTTAATGGAAAAGGACTCGCACCACATGGAAGAACATCAATTGCCTACCACCGTGGAGGACGTTAAACTCAAGCCGGAAGAAACAAAGGAAGCGGCAAAAAAGGTTGCTGAATCTATTTTGGAACAAGCCATCAAGGCTGGACAAAACTTACCGCCCAAATCATCGGAAGTACCTTCGGTCAACTCAAACAACACCATGAAGTCAATGATTGCTCAAGCTCCGGCCGTAGGCAAATTCCTTAAAGAAGTTGCCAGCTCCCCCTTCAAAGATGAATCTCAAGACCTAGTGCCGGTGTCGAAATTGGTAGACAATGCTACCAGTAACTCGGTCTCCTTTAACAACTATTTCCGACCGGGCGACGTTGCTAACCACATGGATCAAAGCGACGAGGAAGGTTTGGTAGCCTCTGGCAGTGCTAGCGAGAGCAACAACTCCGGAGCTGAAGATGCAGCCAGCAGTGCTCAAACCAAGAAGAAGTCGGCATACAGTCTGGCGCCGAACCGTGTATCCTGCCCCTACTGTCAACGTATGTTCCCATGGTCCAGCTCTCTCCGCCGCCACATTCTCACACATACTGGCCAGAAGCCATTCAAGTGCTCTCACTGTCCTTTGCTCTTCACCACCAAAAGCAATTGCGATCGTCATCTTTTGCGCAAACATGGCAACGTGGAATCGGCGGTATCCGTATATGTTCCGGCCGAAGATGTCAATGAGCCTATACCCTTGCCCAAATCCGTCGAAGAAATCGAGAGGATGCAAAAGGAACGCGaagacgaagaaaaaaaacgcttgGCCGAAGAACAACAACGCGAACGCTTGGAAAAGGAACAACGCGAAAAGGAGAAACAAGAGCAGGAACGACAACAGCAACGCCAAGCGATACTCAAACAGTTGGCAGCGGTACAGTTCAATCAGTTTCAACTTAAGACGGAAGCACCGGCCATTTCCTCCTCAGAGTTGCCATACAAATGCCATTTGTGCGAAAGTTCGTTTGCGGAACGCACCCAGTGTTTGGAGCACATCAAATGCTATCACGCCCAAGAATATGAGTTGCTGCTCTCCAAAGGTGCCGTCGACAGTGAGGCCGAAGTAGCACAAATAAATTCCAACGAGGAGGAAGAACGCAATCGCTCAAATGAAGAGGGAACCAAGGGTGGCAAATATCCCGATTACAGCAACCGCAAGGTGATATGTGCCTTTTGCTTGCGACGTTTCTGGTCCACCGAAGACCTGCGACGGCACATGCGCACCCATTCGGGAGAGCGGCCATTCCAGTGTGAAATTTGCCTGCGCAAGTTCACCCTGAAGCACAGTATGCTGCGTCACATGAAGAAGCACAATGGCCTGCATTTGAATGGCATGCTACAGGGTAATGATGCCTTGGTCAACGGCAACAGTTGCTCGGATTACTCGGACGATGAACAGGGGCCCATTGGAGGCCCTCCGCCAGCTATTACAGTACCAAATGCCAACATCAATGCCCTGTTTATGGGATCGAAGATTCAAGAGCTGTTCAGCAAGGCCAACGAATGGGGCAGTGGTGGTCTGTCCGTGCTGCGAGAGCGTAAACAGAATATGGCCGACGAATCGAGCACGCCACAATCGGACCTGATTGGCAATCTATTGGGTATCAGCGATCAGGGTATTTTGAATAAACTAATGTCATCGCCAGACGAAGCAGCCAAGCTGTTGGGTGTCGACAAGTAA
Protein Sequence
MLATPTHNATGDAPAHANAIKMERRDSATSESSLEHLDLGRTPKKLNTATSTPVLTSDKVHNVGSALIAATTAHMAVADTARYLQHKMQDSDEANDYDDEDSADEKSAPTPRQQMHHKRRLAGRNLLDKRTSVHIEYNPDNPNSLRKKFRFNRSSVDYGNESGFVDASNSQLLNSSAATPAATNPHANGSNNNGSKSNSSSAASTPPHQQSNGGNSSADSAPGEDMKYVCPICEVVSATPHQFTNHIRCHNYTSGNTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQSTHHRRNSNGTKFNSNNTTSGVAKTTLAAATAAATTANTATPLSNGQLSEGVKLSGESTAIRAAAAAAAALDLASDNDNHGVASAINASTTGANDKRLNGNADAPAIESYESDGGCSTDTSTGHNTHRNHNNNNNNDMKINNNNYKRKLSDDDRDPQQHQHRHHEIANRSEELLKQHLKAVTNSVHAPVPAVNTTINNNDITREDHELSSVNKTNCESLICPVCNDDEFADVLALDQHMDAKHPEIPAKCTHCEVIFRSHHQLSIHPCSADIKPQEYAESFTVRHRRFSESSVGPALEEERECEREEHRRRQELFHHLELKNMLTHSNSSSSHHNVELTEDDIKSEPSAGHDSKDLADIQSILNMTSSSNTSNFLKNFEQSVNTPSSQYSYDRDEEEAQDVFTAEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRVHLSEVGPAGPFRCNMCPYSICDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSSCDDPTKKLHLFSSPEMDDDSEYYHQPHPKDRSTPVSHLKEMLTSGESLSSKPVKIQVKNLNELLDKSSASSGYNDSYDKRHTEASSSAAPIDMSMDVLDLSKKPPNTNAQKPDEPKVDAPLPLVHKEEKIPTVVPNGANADEPKTDVSSLEKQQQQFLMAQQPQWLNDTAQYLQQLYRNLLFPQLNPFLIPNSPFMPNNMADFQKLAPFFRSMLNASGASLPAGDLDKVINPTPPSTLPPISPMMSEKSSTPSMVSMSSPKSLLSPNPSHLSIPRHVGNPSLPSQPPHLPPTMLSNGPVKMVLKNGVFMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQYYAQRQRSGHHVMRGRGASSAAHMNGIPHLQAAVAQAHYGSNPSSMTSHSPISDQVKYAILAQQLKARKDPDLLQQALVHGSNSVANSSMFAGHMSGHSNGQSSHSYTNYSSQHLSQNGTPNGSMEDDEPKLVIDEDEDEDDEDEDDVEEIHDDQDDEYDHDDIQLMEKDSHHMEEHQLPTTVEDVKLKPEETKEAAKKVAESILEQAIKAGQNLPPKSSEVPSVNSNNTMKSMIAQAPAVGKFLKEVASSPFKDESQDLVPVSKLVDNATSNSVSFNNYFRPGDVANHMDQSDEEGLVASGSASESNNSGAEDAASSAQTKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSVYVPAEDVNEPIPLPKSVEEIERMQKEREDEEKKRLAEEQQRERLEKEQREKEKQEQERQQQRQAILKQLAAVQFNQFQLKTEAPAISSSELPYKCHLCESSFAERTQCLEHIKCYHAQEYELLLSKGAVDSEAEVAQINSNEEEERNRSNEEGTKGGKYPDYSNRKVICAFCLRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHNGLHLNGMLQGNDALVNGNSCSDYSDDEQGPIGGPPPAITVPNANINALFMGSKIQELFSKANEWGSGGLSVLRERKQNMADESSTPQSDLIGNLLGISDQGILNKLMSSPDEAAKLLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01231843;
90% Identity
-
80% Identity
-