Basic Information

Insect: Hydrotaea diabolus
Gene Symbol: -
Assembly: GCA_963513945.1
Location: OY740720.1:55279802-55293699[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.26 22 6.6 0.5 2 23 413 435 412 435 0.93

2 10 0.0037 0.32 12.4 0.2 6 23 444 461 444 461 0.99

3 10 0.023 2 9.9 5.6 1 23 467 490 467 490 0.95

4 10 0.0005 0.043 15.1 1.4 1 23 497 519 497 519 0.98

5 10 3.7e-06 0.00032 21.8 0.6 1 23 527 550 527 550 0.98

6 10 0.3 26 6.4 1.3 3 23 558 578 557 578 0.93

7 10 0.00033 0.029 15.7 0.5 2 23 587 609 586 609 0.94

8 10 0.00041 0.035 15.4 1.2 1 23 617 640 617 640 0.97

9 10 7.7e-05 0.0066 17.7 3.4 1 23 646 668 646 668 0.97

10 10 1.4e-05 0.0012 20.1 3.3 1 23 674 697 674 697 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.26	22	6.6	0.5	2	23	413	435	412	435	0.93
2	10	0.0037	0.32	12.4	0.2	6	23	444	461	444	461	0.99
3	10	0.023	2	9.9	5.6	1	23	467	490	467	490	0.95
4	10	0.0005	0.043	15.1	1.4	1	23	497	519	497	519	0.98
5	10	3.7e-06	0.00032	21.8	0.6	1	23	527	550	527	550	0.98
6	10	0.3	26	6.4	1.3	3	23	558	578	557	578	0.93
7	10	0.00033	0.029	15.7	0.5	2	23	587	609	586	609	0.94
8	10	0.00041	0.035	15.4	1.2	1	23	617	640	617	640	0.97
9	10	7.7e-05	0.0066	17.7	3.4	1	23	646	668	646	668	0.97
10	10	1.4e-05	0.0012	20.1	3.3	1	23	674	697	674	697	0.97

Sequence Information

Coding Sequence: ATGCTAAAATTGAGTAAGGAAACAATTAAATTGAACTCTTGGATTTGTGGGGCATGTTGGCATATTTTAACTGAATTCCATCAATTCTATATACGCGTCGAGGAGGCCCACGTGGACATGGCTATGACAATGAACACAAACCAATCGCCACGTCAGCTTCCGGTCGCCGAACGAGTAGTTGAGGTAGCCGATTACGAAGAAATGATAAATAAGGAGTTATCAAAACAGATCGAAGgtgtaaatattattattaacctAAATAATACAATCAACGAACAAGAAGATTTACCCTTCGATCAATTGGCACAAGGCAGCAATAGTAGTAATGTGGAACAAGCCCAATCGATGGAGCTGGcagtacaaaattattttcatgaaaatgtcATTCATCAGGAACACGGGCCACAACTAGAACAAGTGCCAGCGAATTTAAGTGGATTCGATGCCGAATATATCCATCATGATCTCTTAGAAACAAGTGAATTAGTCGGACTGGGAGATAGTGATAATACAGAGCTACTAAGCGATCTCATACAATTAAGTCAATTAGTTGAAGTAGGCCAGGAAAGTCAGAGGCTAGAAATTAGTGGATTAGATACAGATCACATTCATCAAGAACTACCTAACGAGCAGATACTCACAAGTGGTCTTGTTCAAgcagtaaaacagaaaatggatGGCAGTAACGATATAAATCAGCAAAGTAGGCGATTTCCTGAAGAGGCCGGAGAAGAGCTACATATGGATCCAATGCAAACACAACAACAAGTCGAAGAAGACAATGACATAACAAAAGTTAAATTTGATAATGAGGAACCCATAACCGATAACGAAGACAGCCGAATATTACCAACAAATTGCTTGAAGAAAGCTTTGATTCCTAAGTCAGACCAAATTACCGCAACTTTAGTAGGGACAGGCCATCTAACCACGGAGTTATTTGAGAATACAGATTATATATGCGAGATCGAATCTGAAAATGTTTTGCAGGTAACGCCGGATAAAATGCTTGACAAATCTGCCTGCATAGTAAATCCCATCCAAACACCACAACAGCCCAATGATATTGAACACAATTTCGAAGACGATCAAGAAATTCCTATAGATTATCCCAGCGACAATAATAATTCCAATTCAGACGATCAAACCGACAACGATTCAGCGGCATCAGATAAACAAAAGTCACGTTTAACGCGCCAAAATTACGATGCTTTTCTCtccgaacattttaaaatgtattgttCTATCTGCCAGGAGGCCATGCGCACATTTAACGAGTTACGTAAACATTTCGCCAAAGTTCACAATAGACGGGGCTATGTCAAGTGTTGCGACCGCCAGTTTATGCGCCGAAGCAACCTCGTGGAACACATCCGCTGGCACTGTGAACCCAACAATTTCAAGTGTAAATACTGCGGTAAAGTTATGTCCAATAAACGATGCCTGAGTTTACATGAAAAGCATGTCCACGAAAAGGATTATATTAAGCACCAATGTGATGTATGCGAAAAATTTTTTGCCTCGGCTAATGTCCTTAAGAATCATAAGCTGACCCATCTATCGGATGATGAGAAAAAATTCCGCTGCGATGAATGTGACAAGAAATTTGGTTCCAATACTTTACTATCAAATCACATTCGTTCGGTCCATATGTCAAAGTACATCAAGATATGTGATATTTGTGGTAAGAAATTGCGTTGCCGAAACGATTTTGAACGTCATGCATTGGAACATAAGGGCGTACCCTTGCCCTACCTTACCTGTGACGTATGTGGTCTTAAGCTCACCAATAAAAGTGGCTTAAAACGGCACAAATCCATTCAACATCCGGAAGGCGGTAAAAAGGAGTACAAATGTCATATATGCTCGAAAGTTTCCGACTCTCTCTCAGCTCTGCGGGGCCATATTCAGTACAAACATGAAATGGCGCGCATTTATAAATGCACGGTATGTTCGAAGAGCTTTAAGAAACATTTCACATTAAATGAACACATGGCTGGCCATGCCAAAAAGCCCCTGTACTCGTGTCCCTACTGTCCGAAGACATTTAACTCAAATGCCAATATGCATTCTCATCGCAAGAAAAATCATCCCCTGGAATGGCTGGAAGATCGTCGTAAAAAATATTCGGGTCATTTGCCACCAAACTTTAAGCCACCGTCCACGGTTTACAACCACATTGGTTATCCAATACCTGAAGATAGTGCCGAATAA
Protein Sequence: MLKLSKETIKLNSWICGACWHILTEFHQFYIRVEEAHVDMAMTMNTNQSPRQLPVAERVVEVADYEEMINKELSKQIEGVNIIINLNNTINEQEDLPFDQLAQGSNSSNVEQAQSMELAVQNYFHENVIHQEHGPQLEQVPANLSGFDAEYIHHDLLETSELVGLGDSDNTELLSDLIQLSQLVEVGQESQRLEISGLDTDHIHQELPNEQILTSGLVQAVKQKMDGSNDINQQSRRFPEEAGEELHMDPMQTQQQVEEDNDITKVKFDNEEPITDNEDSRILPTNCLKKALIPKSDQITATLVGTGHLTTELFENTDYICEIESENVLQVTPDKMLDKSACIVNPIQTPQQPNDIEHNFEDDQEIPIDYPSDNNNSNSDDQTDNDSAASDKQKSRLTRQNYDAFLSEHFKMYCSICQEAMRTFNELRKHFAKVHNRRGYVKCCDRQFMRRSNLVEHIRWHCEPNNFKCKYCGKVMSNKRCLSLHEKHVHEKDYIKHQCDVCEKFFASANVLKNHKLTHLSDDEKKFRCDECDKKFGSNTLLSNHIRSVHMSKYIKICDICGKKLRCRNDFERHALEHKGVPLPYLTCDVCGLKLTNKSGLKRHKSIQHPEGGKKEYKCHICSKVSDSLSALRGHIQYKHEMARIYKCTVCSKSFKKHFTLNEHMAGHAKKPLYSCPYCPKTFNSNANMHSHRKKNHPLEWLEDRRKKYSGHLPPNFKPPSTVYNHIGYPIPEDSAE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -