Hdia001491.2
Basic Information
- Insect
- Hydrotaea diabolus
- Gene Symbol
- -
- Assembly
- GCA_963513945.1
- Location
- OY740716.1:55281267-55284264[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.0029 0.25 12.7 1.1 2 23 245 267 244 267 0.96 2 15 0.0013 0.11 13.9 1.2 1 23 278 301 278 301 0.95 3 15 2.1 1.8e+02 3.7 1.8 2 23 322 344 321 344 0.94 4 15 0.088 7.6 8.1 4.1 2 23 352 374 351 374 0.97 5 15 0.0066 0.57 11.6 0.1 2 23 497 519 496 519 0.94 6 15 0.023 1.9 9.9 6.7 2 23 542 564 541 564 0.95 7 15 0.11 9.5 7.8 2.2 2 23 585 607 584 607 0.95 8 15 1.7 1.5e+02 4.0 9.9 1 23 614 637 614 637 0.97 9 15 0.00016 0.014 16.7 0.1 2 23 724 746 724 746 0.97 10 15 0.00025 0.021 16.1 2.3 2 23 753 775 752 775 0.93 11 15 0.23 20 6.7 7.6 1 23 794 816 794 817 0.95 12 15 7.1e-05 0.0061 17.8 0.8 1 23 823 845 823 845 0.96 13 15 4.8e-05 0.0041 18.3 4.8 1 23 851 873 851 873 0.99 14 15 2.7e-06 0.00023 22.3 1.3 1 23 879 901 879 901 0.98 15 15 0.00028 0.024 15.9 0.2 2 22 908 928 907 931 0.89
Sequence Information
- Coding Sequence
- atgttggaaaacgATTCAGAAACAAAAACTTGCCGTACTTGCCTTTTAGTGCAACCAAATACTGTTCACATACTAAATTTTGTCACATATTCTAGTCCAAGGAGGACGCTCGCAGATATTCtgaaaaatttggcaaagttAAAGtttttggacgAACAGGAATGTAATATGCCCCAAAATATGTGCTCCATATGTTGTCGACAATTACGGAGCATGTACATGTTTGTTAAACAGGTCCAGGAATGCAACGACAAGCTTCTCACAACACTCCATAAAACATCTGATAATCAGCAAAGgcaaactattttattttccgAAGAGAAAGAGgctgcaataaaaattaaaaaagaaagtaGTAATGAACAGGAGCTTGTTCAATGCGATAGGTTTAATAATTGGAATTCTGacttaaaaacaaactttatgGAGGTCACATTTGAAACTCCATATTGTGCTAACAATATGGACAGAAGATATTTTGAATGCGAAGACATACATAATAATGAAGTTAGCCCCAACACATGTGATATATTGCAACTTACCAGTGACGATAGCGAGAATCAAGAAATGGATGTCTCATCCTCTAATCCGAACATTTTAGATGTTCCTGTAAAAAGTTTAACCTTGGTCGTTGATAAGTCGCAGGACGACGACTCTGATGAAGATACTGCTTATTTAGATACCATTGCTAGTGATAAGGTGCCCACTTCTACTGACATGTTACGAAATGTCTCTTGTGctaaatgtaacaaaaatttGAGCAGCCATGAAAAATTGCTGGAACATATGCGCATAGAGCATACTGAAAATACGAACACAAAAAGAAGGTTCTTCACCTGTGTTTATTGCTCCCAAAAGTATGACGATAAACGGAACTTGAACATTCATCTTATCAATAAACACAAAACTGACTATAATGATTCAATAAAAAACGACAAATCcgcaaaagaaaataataagatGAAATGCAAATTATGTGAGTACTCTGCCAGAACCCCTGCTGCTCTTCACTTCCATAAACGCTCCAAGCATGGCACCGAAGAcgataaaataaaatgcaatttttgttcttactcaagttacaaaaaatttgatttgttgcatcacataaaaaaatcgcatttatcagCAATTAAAACCTTGAAAAGGAATCTCAAAAAAGGAGAAAGTGCTGGGGAAACCCAATCAttgaaaattaaaccaaattctCAAACAGATATTAAAGAATCCCTTCACAAATTACAGGAATATATAGACAAAAAGGATGAAGATCCTATTGAAAATAGTGCTGAAGATTACAATGAAGAATGCTCTAGTGGTGACGAAAATCTTATCagagatattttaaatattaaaaagaggTCCACAAGGTCTACCTTAATTGGCGCACCTAGCTCAACTTGTAAGACAAAGGAAACtacaatttttgatgatgtaaAACCACACAGTCCGGAAATCCAACACGtcggaaaaagaaaagaaaatacttCATGTCCTTTATGTGAAAAAGTATTAAATGGCCGTGATGATTTACTTACTCATATGCTTTTGGAACATAGAGAGCAGTGTTCGTCTGCTTACGTAGATAATTCAAAATGTTCAACATCTAGAAACGATATGTTGAAATGTGAGCATTGTTCCACAAAATTTACCCACAAATACGAAAAAAGAAACCATCTTAGGGATCAgcatgacatttttttcaaggcATCTAAAACAAAGCCTGAGTATACAATCGAAAACAAAGTGATAATGTGTCGGCTTTGCGATTATACGACGAAAACGTATGCTGGCTTACATTATCATACCCGCTCTAAACATGGCACGGAAAATGATAAATTCAAGTGCAACTTTTGTTCTTATACATGTTTTAAAAAGTTCGATTTATTGCATCACACAAAACGAACTCATTTATCTGCGGTTAAGGCAATAAAAAAGGACATCGAAAAAAATAAGCGAGAAGGAGAAACATCAGCAACAGAAATGGTCCCTAATAAATTTCCCGGTGAAGACATCACAAGTTTAGTTCAGAAACATCAGGGTGCCGGTAATCTTGATGCCACAGAAAATTGTCTAGAAGTTTCCAGTGGTGATGATGACATAATCAGGGAtatattaaatatgaaaaaaagagTACCAAAATCTGGAACAAGCAGCTCATTTGCTAGGCGTTGCGAAGAATGTGGCAATGTTTATAGGAATTCAGTAGCATTAAATGTGCACAGGCGTATGGTTCACCGGGAACATGTATATAGCCAATGCACACATTGTGAGAGAAAATACAAAAGACCTTACGACTTAAAACTACATATATTAGACAAGCATACGCCAAAGGACGTTAATCTAAAGCCAACACCAAAAGTGGAACGAGAAAAGCGTTTTATGTGCACACAGTGCTCCTATATTTGTTCGACCTCAACCCTATTAACGATACATACACATCGCCATCATACCGGCGAAAAACCTTATAAATGTGAGTTCTGTTCCAAAGCGTTTGTGGTTCCATCTGATTTAAAAACTCACCGATATTTACACACGGGCGAAAGACCATTCCAATGTTCTATTTGTCTTAAAGGGTTTCGCGATAAAAATCACATGCAACGACACAAACGTACTCATTGTGAGGTGAAGCCGTATAATTGTCTCGAATGTGGTAAgggattttctaaaaattacaatttatctATACATAAACGAACACACATGAAGGGTCAAAAGCTTAGATGTTTAGTGTGTGGTAAATATTTCAAAGATAGAGCTCTCCTTAATGTCCACCAAATTAGCGAAAATCATCACGAGGaagttgtttaa
- Protein Sequence
- MLENDSETKTCRTCLLVQPNTVHILNFVTYSSPRRTLADILKNLAKLKFLDEQECNMPQNMCSICCRQLRSMYMFVKQVQECNDKLLTTLHKTSDNQQRQTILFSEEKEAAIKIKKESSNEQELVQCDRFNNWNSDLKTNFMEVTFETPYCANNMDRRYFECEDIHNNEVSPNTCDILQLTSDDSENQEMDVSSSNPNILDVPVKSLTLVVDKSQDDDSDEDTAYLDTIASDKVPTSTDMLRNVSCAKCNKNLSSHEKLLEHMRIEHTENTNTKRRFFTCVYCSQKYDDKRNLNIHLINKHKTDYNDSIKNDKSAKENNKMKCKLCEYSARTPAALHFHKRSKHGTEDDKIKCNFCSYSSYKKFDLLHHIKKSHLSAIKTLKRNLKKGESAGETQSLKIKPNSQTDIKESLHKLQEYIDKKDEDPIENSAEDYNEECSSGDENLIRDILNIKKRSTRSTLIGAPSSTCKTKETTIFDDVKPHSPEIQHVGKRKENTSCPLCEKVLNGRDDLLTHMLLEHREQCSSAYVDNSKCSTSRNDMLKCEHCSTKFTHKYEKRNHLRDQHDIFFKASKTKPEYTIENKVIMCRLCDYTTKTYAGLHYHTRSKHGTENDKFKCNFCSYTCFKKFDLLHHTKRTHLSAVKAIKKDIEKNKREGETSATEMVPNKFPGEDITSLVQKHQGAGNLDATENCLEVSSGDDDIIRDILNMKKRVPKSGTSSSFARRCEECGNVYRNSVALNVHRRMVHREHVYSQCTHCERKYKRPYDLKLHILDKHTPKDVNLKPTPKVEREKRFMCTQCSYICSTSTLLTIHTHRHHTGEKPYKCEFCSKAFVVPSDLKTHRYLHTGERPFQCSICLKGFRDKNHMQRHKRTHCEVKPYNCLECGKGFSKNYNLSIHKRTHMKGQKLRCLVCGKYFKDRALLNVHQISENHHEEVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -