Basic Information

Insect: Hydrotaea diabolus
Gene Symbol: -
Assembly: GCA_963513945.1
Location: OY740720.1:122091577-122094635[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.39 34 6.0 1.0 1 19 230 248 230 251 0.87

2 12 0.17 15 7.2 0.1 1 19 269 287 269 288 0.95

3 12 0.013 1.1 10.7 1.9 2 23 309 330 308 330 0.96

4 12 4.7e-06 0.00041 21.5 1.0 2 23 344 365 343 365 0.98

5 12 3.7e-05 0.0031 18.7 1.2 1 23 391 412 391 412 0.98

6 12 0.0001 0.0088 17.3 1.2 1 23 418 440 418 440 0.98

7 12 0.00049 0.042 15.2 1.3 1 23 473 495 473 495 0.96

8 12 2.2e-07 1.9e-05 25.7 0.8 1 23 501 523 501 523 0.98

9 12 0.00014 0.012 16.9 3.5 1 23 529 551 529 551 0.99

10 12 9.4e-06 0.00081 20.6 2.8 1 23 557 579 557 579 0.98

11 12 6.2e-05 0.0053 18.0 0.4 1 23 583 605 583 605 0.98

12 12 0.0046 0.39 12.1 0.2 2 23 618 640 618 640 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.39	34	6.0	1.0	1	19	230	248	230	251	0.87
2	12	0.17	15	7.2	0.1	1	19	269	287	269	288	0.95
3	12	0.013	1.1	10.7	1.9	2	23	309	330	308	330	0.96
4	12	4.7e-06	0.00041	21.5	1.0	2	23	344	365	343	365	0.98
5	12	3.7e-05	0.0031	18.7	1.2	1	23	391	412	391	412	0.98
6	12	0.0001	0.0088	17.3	1.2	1	23	418	440	418	440	0.98
7	12	0.00049	0.042	15.2	1.3	1	23	473	495	473	495	0.96
8	12	2.2e-07	1.9e-05	25.7	0.8	1	23	501	523	501	523	0.98
9	12	0.00014	0.012	16.9	3.5	1	23	529	551	529	551	0.99
10	12	9.4e-06	0.00081	20.6	2.8	1	23	557	579	557	579	0.98
11	12	6.2e-05	0.0053	18.0	0.4	1	23	583	605	583	605	0.98
12	12	0.0046	0.39	12.1	0.2	2	23	618	640	618	640	0.95

Sequence Information

Coding Sequence: ATGGCTGACGACGAAATCATTAATTATGTTTCCATTACGGAAACAACTGATGGCGATAATTACTGGTACTATGAAGATGTGGGATACGACAGGCTTAATGTCAATGACGGAAGCGATGGAATATTTGAAGAAGATGCTGCAACACAAGACCAAGACACTCCAGCCGACGACAACAACAGCCAACTTCAGTACGAAGAAGATGAAGAAGTCGATGGTGGGCACCTTGAAAATGACTTCTCTAAACATAATCTGATCCTAAAGGAAATCATTAATGAACAGGGTCTATTGTCGGAAAGCTACTTCTGTCAGGAATGTTATGTTGAATATAGTGACATTAACGAATTTCTTCACCAGCATCCGGGAGTAGaactattaaataaaaacccCGAAGATGAAGCGGAAGAAGATGAAGAAAATGGCAGTCCTGTAGTGGAAGATGAAGCGCTAGTAGAAGAAGATGGTTGTCCTATAGAGGAAGATGAGACCCTCATAGAAGAAGACAAGACTTTCAAGAAGGAAGAAATATTTGAAGAAGAGACTCGTGATAAATTGTGGGATTTAGTAGAACACATAAGGGAGGAGGAAACTAATGAGCACCTTGGATTAACGAAATTGCAAGAAGATGAAAATGAACCCATAGAAAATATAGTCACAAAATCGGAAGTATTAGACGCGGAATGTGAACGTTACTATTGTTATGAATGTCAACAGGTCTTTACCGATTTGCAATCGGCGGAAGAGCACGACTGTACACAGCCACACGAAGATGAGGAGGGAGCTGGACAACTGGTGGGCATGACAGACTTTGCCTGTGCATATTGTAGGCAAGAGTTTCCATCATACGATGAACTATTAATTCATTCCCCAaattgtgaagaaaatGCCACTGTTCCGCTGACTACACAACCAGCCGAATCTACCTTGCACTGCGATTTATGTAACAGAGATTATCCATCGTTGCGTTCGTATAATAATCATCAGCGCCTGCACAAGAAAGTAAAAAACGCTTCAGTACCAACAGGGCCCACTAAATGTGAGATCTGTAATACAAATTTCGAATCGCCAAAGAATTTAAAATTACATATGAAAATGCACAATGAACGAACATTAAAGACTATACAGGAAGCCTTACCCGCCGGAACACAATCGGAATACAGTCAATTAAATCAATTCTACTGTGAAATATGCAATAAAAGTTTCGATCAAAGACTTCTGACCATACATCAAAATATGCATCGAAATGTGGAGGAATATAATTGCAGTAAGTGCAATAAGCAATTTGAGAACTCGGTGAGCTATGAAATGCACATTCAAATGCATACCGAAAATCAGGGCAATAGTAGCAAGCAAACCATTGCACCCGACCTAGATCTATTCGGCAACTCTGCCACTTCCTCCGATGGATCGCGTAAAAAGCACGCTTGTCAATATTGCGGAAAAGAGTTTCAGCGACCCTACGAGAAGGTCAAACATGAACGTATACACACGGGAGAAAAGCCCTACAACTGTGAAGTCTGTGGGAAATCGTTTCGTGTCTCCTACTCGCTAACCTTACACCTGCGTACGCACACCGATATTCGGCCATATGTCTGTGCTACCTGTAACAAGCGGTTCAAACAACAATCGGTGTATGTACATCATCTGAAAACGCACATAGCCGAACGGCAATATAAGTGTGATATATGCGGTAAAAGCTTTCGGACATCTGTTCAGATGTGTGGCCATAGGAATAGTCACAATAAGCCATTTAACTGCACCGAATGCAATCGTCCTTTTGCCTCCATGTATGCGGTAAAGATTCATATGAAAACTCACAACAAAACCCATaagtcaaataaaaatttgaaaaatcgttGTGATTTGTGTGGCGCTTCATATACCCGAATATTTGCTTTACGCTTGCATTTGAAAGAACAACATGGTGTTGATATAGATCCGGGACAACTATTAGATGCTGAACATTCCAATTCGCTGAATAGCAAAGACGTGGACGTCGAAACGGCCATTTTAATGAATGCGGCCAATGAGGCCCAACTGGGAGATGCACATAATGCGGAAATCGATTTCATGAGTAACCACAATGATGCTAATAATGATCATGAGGAAGGAAATTTCTTGGGAAACACTGTAGAATTGGGGGGACATACGGATAATATTACCGAAGACATGCATCGAGATGACGATTTGGACGAAACGGTGGCGGCAACACAAACTATTTTGCAAAATGAAGagATTATAGTTGATAATTTTCATCCCGAAGAAATCATTACGGATTGGTTAAAGTAG
Protein Sequence: MADDEIINYVSITETTDGDNYWYYEDVGYDRLNVNDGSDGIFEEDAATQDQDTPADDNNSQLQYEEDEEVDGGHLENDFSKHNLILKEIINEQGLLSESYFCQECYVEYSDINEFLHQHPGVELLNKNPEDEAEEDEENGSPVVEDEALVEEDGCPIEEDETLIEEDKTFKKEEIFEEETRDKLWDLVEHIREEETNEHLGLTKLQEDENEPIENIVTKSEVLDAECERYYCYECQQVFTDLQSAEEHDCTQPHEDEEGAGQLVGMTDFACAYCRQEFPSYDELLIHSPNCEENATVPLTTQPAESTLHCDLCNRDYPSLRSYNNHQRLHKKVKNASVPTGPTKCEICNTNFESPKNLKLHMKMHNERTLKTIQEALPAGTQSEYSQLNQFYCEICNKSFDQRLLTIHQNMHRNVEEYNCSKCNKQFENSVSYEMHIQMHTENQGNSSKQTIAPDLDLFGNSATSSDGSRKKHACQYCGKEFQRPYEKVKHERIHTGEKPYNCEVCGKSFRVSYSLTLHLRTHTDIRPYVCATCNKRFKQQSVYVHHLKTHIAERQYKCDICGKSFRTSVQMCGHRNSHNKPFNCTECNRPFASMYAVKIHMKTHNKTHKSNKNLKNRCDLCGASYTRIFALRLHLKEQHGVDIDPGQLLDAEHSNSLNSKDVDVETAILMNAANEAQLGDAHNAEIDFMSNHNDANNDHEEGNFLGNTVELGGHTDNITEDMHRDDDLDETVAATQTILQNEEIIVDNFHPEEIITDWLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -