Hdia007899.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hydrotaea diabolus
Gene Symbol
-
Assembly
GCA_963513945.1
Location
OY740717.1:15450361-15459208[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.18 16 7.1 0.1 1 23 17 40 17 40 0.89
2 16 1.2e-05 0.00099 20.3 1.2 1 23 92 115 92 115 0.97
3 16 0.00018 0.016 16.5 3.7 3 23 123 144 121 144 0.97
4 16 0.0026 0.22 12.9 1.1 1 23 155 178 155 178 0.95
5 16 2.6e-05 0.0022 19.2 2.0 1 23 285 307 285 307 0.98
6 16 0.0014 0.12 13.7 3.8 1 23 313 336 313 336 0.89
7 16 0.0074 0.63 11.5 0.7 1 23 344 366 344 366 0.98
8 16 0.0091 0.78 11.2 3.6 1 19 374 392 374 395 0.93
9 16 0.22 19 6.8 1.8 1 23 435 457 435 457 0.97
10 16 0.00022 0.019 16.2 1.7 1 23 463 485 463 485 0.98
11 16 1.6e-05 0.0013 19.9 4.2 1 23 491 514 491 514 0.95
12 16 0.14 12 7.4 6.4 1 23 521 543 521 543 0.99
13 16 6.7e-05 0.0058 17.9 1.0 1 23 609 632 609 632 0.95
14 16 9.9e-05 0.0085 17.3 1.5 1 23 638 660 638 660 0.99
15 16 7.6e-05 0.0066 17.7 0.3 2 23 668 689 667 689 0.97
16 16 0.0002 0.018 16.4 7.6 1 23 695 718 695 718 0.97

Sequence Information

Coding Sequence
ATGGAGAATATTGTTATATTAAGTGATATTCGACTAAACGGACCACCCTTTGCATGCTTAATCTGTGaggaaagtatcaccgacattTATCAATTACGGGAACATTATTATGATGAACATCTCAACTACAATTCAAGTTTTGctgaaaattttggaaataaatatacaaataacAACCAGTTGGATGAGGTGGACTTCCATGACGAGGTAAAGGACAAGGCCAAACAGAAAAATAcagctaaacaaaaaagaatgttgAAAGGAAAAGGAGAGTTCGAGTGTCCTTTGTGCAATAAATATTTCTCCCAAAAATCTTCGCGTGCCCGTCACATTAGGGAACAGCATGAAAACCCGGAAAAATATGGATGTACTCAATGTGAGCAAAGattttgtaaCAAATTCAATCTTCAAACGCATCTGAGACGTGCTCATTCCAAAAAACTGGAAAAATCGGACAGTGCCTTCAAATGCCCAATCTGCCCATGTACATATGGAACACAAATCGCCTTAAGCAATCACAAAACTAGCCAACATAAAAATGTCATGGAACTGGAGAGACTTCCTACAGATTCAGCACAAGGCGTCACAAGTGAAACCGAAGAAAATGATCCTCAGAGTCTAGCGGAAAGTGTACTAAAAGAACTAAAGCAGCTGCAGAAAGCCATTGAAGATACAGAGCAAGGCAAGAAGTCGCCAAAAAGTGCAGAAAACTCCAATCAATCTTCAGCGCAATTAACCTCAGTAGACGATGCAATAGTGGAGGAGGTAACGATCAAAGATCGTTTATTTCCTTTCAACGATTTTACAGAGTATAAAGTGCAGCAGATCAAAAGGTCAGATGGATGTTGCTATTATGTTTGTGAATATTGTAGCAAAGAATTTCGCAAGTCCTATGGCTATTTAAGGCACCGTAGAATCCACACCAAACTTCGTCCCTTCATCtgtgttttatgtaaaaaatcatttcctACACAAAATCAACTGAAACGTCATTGCTCCACAAGGCATAGTGCTTTGAAGAAAAATCTCTTTAAGTGTCCCAAATGTTTAGAAGGTTTTACCACAATAACACTATACGATAAACACTTGagTTCTCATTCACCacagtcgctcataacgttcaATTGCAAACAATGCCCAAAGTCTTTCAAATCCTTGAAATCATATTTCGCCCATAACCACAAAGAGATTGATCCAGAATTGAACATGTTAAAGTCAATTTTACCTTCACCTACATGTGTAGTTAAAGATGGGGAAACGGGACAGGTGTACAATCAGCAGGTGTTGGCCCCATCACCAATGTTTAAATGTTCCATTTGTGACGTGGTTCTTTCTTCGGACGTTTGTCGAAAACAACATGAAAGACGTcatcaaaagttgtggaaataTCAGTGCAATATATGCAAAGGTTTCTACGCCTCCAAATCATCCTTAAAAGTTCATACACGATTTCATCTGAATCTTCGCAACTTCAAATGTAACGAGTGCAATAAAATGTTCCATACAAAGTATCAACTAAATCGGCATGAACTAATAAGGCATAGTTCAGTCGAAAAGAACTACAAATGTCGGTACTGTGATAAACTGTTCAAAATTCGACAATATTGCCGAAGTCATATGATGACACATCTAAAACAATTGATAAGAACATCCAATGAAACAACCAAAAAAGCAGAAGAGAACGTAAACAACGTGACCTCCTTGCAAACCATAATAGAAAATACCGACAAGGGAGAAGTGATAGTAGAGGAATTACAAATTCCAAAGAAACCCAAAAGAAACCTAAAAGAGGCTAAGACAAAAGATACAAATCTCAATTTGCCCTACAAATGTTCACTTTGTACGCAATCATATCGTTACAATGGCTGGCTCAAGAAACATATGGCGGAATCTCACTCCAATGAAAGGCCTTATCAGTGCGACATTTGCTTCAAGGGCTTTcgtaaaaatcaagttttggaaAAGCACCGTTTAACCCACCAGGAAGACAGAGGACAAGTGACTTGCCAGGTTTGCGGCAAGCAGTATGTCAACGATAAATCCTTGAAAGTTCACCTGCGAATACACACACAAGCAAAACCTTTTAAGTGTGAATTATGTGCGAAATGTTTCAGAACATCTGGTCATTTGAAAGCTCACCACAAATCAACTCATCGCGATAAGgtgtaa
Protein Sequence
MENIVILSDIRLNGPPFACLICEESITDIYQLREHYYDEHLNYNSSFAENFGNKYTNNNQLDEVDFHDEVKDKAKQKNTAKQKRMLKGKGEFECPLCNKYFSQKSSRARHIREQHENPEKYGCTQCEQRFCNKFNLQTHLRRAHSKKLEKSDSAFKCPICPCTYGTQIALSNHKTSQHKNVMELERLPTDSAQGVTSETEENDPQSLAESVLKELKQLQKAIEDTEQGKKSPKSAENSNQSSAQLTSVDDAIVEEVTIKDRLFPFNDFTEYKVQQIKRSDGCCYYVCEYCSKEFRKSYGYLRHRRIHTKLRPFICVLCKKSFPTQNQLKRHCSTRHSALKKNLFKCPKCLEGFTTITLYDKHLSSHSPQSLITFNCKQCPKSFKSLKSYFAHNHKEIDPELNMLKSILPSPTCVVKDGETGQVYNQQVLAPSPMFKCSICDVVLSSDVCRKQHERRHQKLWKYQCNICKGFYASKSSLKVHTRFHLNLRNFKCNECNKMFHTKYQLNRHELIRHSSVEKNYKCRYCDKLFKIRQYCRSHMMTHLKQLIRTSNETTKKAEENVNNVTSLQTIIENTDKGEVIVEELQIPKKPKRNLKEAKTKDTNLNLPYKCSLCTQSYRYNGWLKKHMAESHSNERPYQCDICFKGFRKNQVLEKHRLTHQEDRGQVTCQVCGKQYVNDKSLKVHLRIHTQAKPFKCELCAKCFRTSGHLKAHHKSTHRDKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-