Basic Information

Insect: Hydrotaea diabolus
Gene Symbol: -
Assembly: GCA_963513945.1
Location: OY740718.1:14447138-14453882[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00055 0.047 15.0 2.7 2 23 239 260 238 260 0.97

2 12 6.2e-05 0.0053 18.0 0.7 1 23 266 289 266 289 0.95

3 12 0.00046 0.039 15.3 0.0 1 23 302 324 302 324 0.97

4 12 0.0012 0.1 13.9 0.9 1 23 329 352 329 352 0.97

5 12 0.00012 0.01 17.1 0.8 1 23 358 380 358 380 0.99

6 12 9e-08 7.7e-06 26.9 2.0 1 23 386 408 386 408 0.98

7 12 0.00011 0.0095 17.2 3.6 1 23 414 436 414 436 0.96

8 12 1.1e-06 9.2e-05 23.5 2.1 1 23 441 463 441 463 0.99

9 12 0.00015 0.013 16.8 0.5 1 23 469 491 469 491 0.97

10 12 2.8e-05 0.0024 19.1 3.6 1 23 497 519 497 519 0.98

11 12 3.1e-05 0.0027 18.9 0.5 1 23 525 547 525 547 0.97

12 12 0.0001 0.0088 17.3 3.3 1 23 553 575 553 575 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00055	0.047	15.0	2.7	2	23	239	260	238	260	0.97
2	12	6.2e-05	0.0053	18.0	0.7	1	23	266	289	266	289	0.95
3	12	0.00046	0.039	15.3	0.0	1	23	302	324	302	324	0.97
4	12	0.0012	0.1	13.9	0.9	1	23	329	352	329	352	0.97
5	12	0.00012	0.01	17.1	0.8	1	23	358	380	358	380	0.99
6	12	9e-08	7.7e-06	26.9	2.0	1	23	386	408	386	408	0.98
7	12	0.00011	0.0095	17.2	3.6	1	23	414	436	414	436	0.96
8	12	1.1e-06	9.2e-05	23.5	2.1	1	23	441	463	441	463	0.99
9	12	0.00015	0.013	16.8	0.5	1	23	469	491	469	491	0.97
10	12	2.8e-05	0.0024	19.1	3.6	1	23	497	519	497	519	0.98
11	12	3.1e-05	0.0027	18.9	0.5	1	23	525	547	525	547	0.97
12	12	0.0001	0.0088	17.3	3.3	1	23	553	575	553	575	0.97

Sequence Information

Coding Sequence: ATGTCGACATTACTGCTGGGGCGCATTTGCCGTACCTGCCTCTTAGAATCTTCCACTATGCATAAGTTAGCAGATATTAAAGAAGATAAGCTTCAAATTGAGGAAATGCTAATTAAGACGATTCCAAGTTTCGATCTGTGTATGGGTGGCGATATTCTGCTGCCGGTGGAAATATGCGATGATTGCTTGGAAAAATTGGATGTATCATACAAGTTTTGGAAAGTGTGTTGTGCCTCCAACGAGCGTTTGCGAGGCCTAATTCTTGATCACCAGGAGGTGCAGGTATTAGCTCCTGATGCAGATTTAAATGCAGAAGATTTCCTGAAAGATGAAAGAGAGTCATTGGGCGTTGATAAAGAATCATTGAATTCGGACCATGAAGAGGAGAATGTGCAAAATGTTCTATACAAATTAGATAATGCTACCAAAGAAGACCCGACGACACAATTACCTTACCAAAATATTGAGGAGATAAAGCTAGAGGTGGAGACATCAGTTTTTTCTCCTCGGGAGCCCAGTGAAGATTTTGATGGATTTGAGGAAGAGTTTGGAGGCGGTGACtgcgacgacgatgatgacgattattggccgacaaagaaTGAGGATAACGATGAAAGCGAAAGtaaCCTACCTAATGACTCGGAGAATTCAAATAAGCACAAGTCAAAGACAactagaaaatacaaaaaacgcgCCCCGGCTGCCAGCAACAAAACATGCCTTgaatgtagaaaaatatttaagaaaaaaatgtttctaactCGTCACATGTCGGTGCATTCGCCGGACAATCCATTTGTATGCGAAATATGTGAATATCGTTTTTCCACagaaaaactgttaaaaatcCACATCTCTTATAAGCACAACCGTGGCGTGGCTATAAGTCTGTCCGGTGGTCCATATCAGTGTCCTGATTGCCCGATGATTTTCCAACAGACAAGAGCGCTGGCAGCGCATCGAGTGATGCATGCTGAGAGAGACTTTAAATGTAAGGTGTGTGAAATCAATCTGAAGACCTTGTCAGCGGTAACGCGCCACATGAACTACAAACATCCCGGTGTCCTGCCGTACAAATGTGAGATGTGCGACCAGGGATTTCCAGTGGAATCCCATTACAAAGACCATGTGAATATGCATAAGGGCTTTAAGAAACACAAATGTGAAATGTGCGATAAAAGCTTTCCCAACAGCACCGCCTTAAAAGATCACATGCGTACGCATACTGGAGAGTCACCATATTTATGCTCCCATTGTGGCAAATCATTCAAAACTTCCAACATATTGCGGCAACATTTGCAGAGACATGGAGAAAAGAATTTCCAATGTCCAGAGTGCCCTATGCGTTTTTATGTCAAGGTCAATCTGCAAAAGCATATGTGTACCCACTCAAAGGAAAAGCCTTTTGTTTGCGACGTTTGCGGTTCATCATTTACCCGAGGTGACTCGTTGAAGGCGCATAAATTCAAACATTCCGGAGAGAGACCCTTTAAGTGTGAAGAATGCAATATGAGCTTTGTTTTTAAACGACATCTTATACGTCATAAAATTACCCATACGGGCGAGAAGCCTCATATGTGTACATATTGTGATCGTGCCTATGCGGCCAGTGGGGATTTGGTCAAGCATTTGAGAACCCACCTGGGTGagaacacatatttctgcaatgAGTGTCCCGAGACATTTAAGTACCAGCATGACTTGCGTGATCACAAGAACCAGCATTATAAAGAAAAAGCGGTAAATACAGAGGAAATGGCTGACAtcgatacgagtatatttaacgAAGAATCGTAA
Protein Sequence: MSTLLLGRICRTCLLESSTMHKLADIKEDKLQIEEMLIKTIPSFDLCMGGDILLPVEICDDCLEKLDVSYKFWKVCCASNERLRGLILDHQEVQVLAPDADLNAEDFLKDERESLGVDKESLNSDHEEENVQNVLYKLDNATKEDPTTQLPYQNIEEIKLEVETSVFSPREPSEDFDGFEEEFGGGDCDDDDDDYWPTKNEDNDESESNLPNDSENSNKHKSKTTRKYKKRAPAASNKTCLECRKIFKKKMFLTRHMSVHSPDNPFVCEICEYRFSTEKLLKIHISYKHNRGVAISLSGGPYQCPDCPMIFQQTRALAAHRVMHAERDFKCKVCEINLKTLSAVTRHMNYKHPGVLPYKCEMCDQGFPVESHYKDHVNMHKGFKKHKCEMCDKSFPNSTALKDHMRTHTGESPYLCSHCGKSFKTSNILRQHLQRHGEKNFQCPECPMRFYVKVNLQKHMCTHSKEKPFVCDVCGSSFTRGDSLKAHKFKHSGERPFKCEECNMSFVFKRHLIRHKITHTGEKPHMCTYCDRAYAASGDLVKHLRTHLGENTYFCNECPETFKYQHDLRDHKNQHYKEKAVNTEEMADIDTSIFNEES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -