Hdia022915.2
Basic Information
- Insect
- Hydrotaea diabolus
- Gene Symbol
- bab2
- Assembly
- GCA_963513945.1
- Location
- OY740719.1:164398583-164404502[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.9e-18 1.9e-14 53.9 0.0 1 43 57 100 57 102 0.95 2 2 2.7 5.2e+03 -1.9 0.1 18 27 158 167 157 168 0.89
Sequence Information
- Coding Sequence
- ATGATTGAAAGCGGACATCCTTGGATGGCTGGTGCATCAACGTCTTCGGTAACTGCAGACAGTTATCAGTATCAATTGCAGTCGATGTGGCAAAAATGTTGGAATACTAATCAGCAAAACCTTGTGCAACAATTGAGATTTCGTGAGCGCGGCCCATTAAAATCGTGGCGTCCGGAGGCCATGGCCGAAGCCATTTTCAGCGTACTCAAAGAAGGCTTATCCCTTTCGCAGGCGGCCCGGAAATACGATATACCATATCCGACATTCGTTCTTTATGCAAATCGCGTTCACAATATGCTGGGTCCCTCGCTCGATGGTGGTTTAGATCCAAGGCCCAAGGCCAGAGGACGTCCCCAGCGTATATTACTGGGCATGTGGCCGGAGGATTTAATACGTTCCGTCATCAAGGCTGTAGTGTTTAGGGATTATCGCGAGATCAAGGATGAAATGGGTGGTTTGCCATTCGCCAATGGACAGGCTCATGCGGCTGCCATTTTCGGCTCATCTACTGCAGCTGGTACATCATCAGCCGCCAATGGCTATCATAGCGCCGCTAAATTAGCGGCACAAACCGCCGCTATCGGTCATCAAGACTCTCCGAGTCCACTGTCGTCAATGACGGAAAATTTGCGCCGGCAAATAAtgtcacagcaacaacaatcgcCCATTTCCCACAACATGAATATGTACAAATCGCCGGCCTATGTGCAACGTTCGGAAATAGAAGATCCCATAACGGCAGCGGTGAGCagcaaacaacagcaacaacatgtaGCCGTAAGTGGTGGTGTTGGTGGCGCTGGTGGCAGTGATCGGCGCAGTTCTGAGAACTTGCCCGATTTAAGTGCATTAGGTTTGATGGGTTTGCCCGGCCTGAATGTTATACCCACAAGTGGCGCCCGTAGCAATCACAACATGCATTCCAATGCGGCGGCCTTCACTCGCGATCTGGAACGTGAACGAGAGCGCGAACGTAATCGCGAGAGAGATCGCGAGCATCGCGAAAGAGAAAGGGAGAGAGAGCGCGAAAGAGAACGCGAGCGTGAACGAGAGAGGGAACGAGAACGTGATCTTAAAGAAGCCATGCAGGCCCGACAGTATGGCAATCAATCACGTGGCTCGGCGGGCTCCGATATGCAGAAACCCAGTGGCCCCGCCTCACCCTTCCCccataacaaaaacaaagatCACACCAACTATGCTTACAATAAACGTTTCTTGGATAATCTGCCGCCCGGCATCGATTTCGAAGCCATTGCCAATGGCCTGCTGCAGAAAAGCACGGCCATCAAGAGTCCGCGCTTTGAGGATTTCTTCCCCGGACCCGATATGAGTGAACTCATAGCAAATGCCGAAGCCGCCGCGGCCAGTGCGCCCTTTCCCGCCCAACGTGAGTACAATCTGATGAAAATCAAACTGGAACAACAGCCCACACAGGTGCAGCACGAGGACTGA
- Protein Sequence
- MIESGHPWMAGASTSSVTADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGLDPRPKARGRPQRILLGMWPEDLIRSVIKAVVFRDYREIKDEMGGLPFANGQAHAAAIFGSSTAAGTSSAANGYHSAAKLAAQTAAIGHQDSPSPLSSMTENLRRQIMSQQQQSPISHNMNMYKSPAYVQRSEIEDPITAAVSSKQQQQHVAVSGGVGGAGGSDRRSSENLPDLSALGLMGLPGLNVIPTSGARSNHNMHSNAAAFTRDLERERERERNRERDREHRERERERERERERERERERERERDLKEAMQARQYGNQSRGSAGSDMQKPSGPASPFPHNKNKDHTNYAYNKRFLDNLPPGIDFEAIANGLLQKSTAIKSPRFEDFFPGPDMSELIANAEAAAASAPFPAQREYNLMKIKLEQQPTQVQHED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00679401;
- 90% Identity
- iTF_00816468;
- 80% Identity
- -