Basic Information

Gene Symbol
ct
Assembly
GCA_963513945.1
Location
OY740718.1:5739481-5861255[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 9.7e-27 1.1e-22 80.7 0.0 3 72 1023 1093 1021 1098 0.94
2 3 9.1e-32 1e-27 96.8 0.0 3 77 1445 1520 1443 1522 0.96
3 3 1.1e-30 1.3e-26 93.3 0.0 3 76 1705 1779 1703 1782 0.96

Sequence Information

Coding Sequence
ATGCAGCCAACATTGCCACAAACAGCCGGTACAGCCGATATGGATTTGACGGCTGTGCAATCAATGGAttggtttttcaaaaaggaacaaatttatttattggcaCAATTTTGGCAACAGAGAGCTACCTTGGCTGAAAAGGAAGTCAACACTCTGAAAGAACAACTATCCACCAATACACCCAATACCGATACCAACAGCGACAGTGACAACAATCTCGACTTGTCCATTGCCACAACGACAGCAGCTAACATCATCAATACCAACAACACCAGCAGCGACAGCCACCACACATCGTCGGCGACCACCAACGATATCCCACCAAATCATCGCCTATCGCCCTCATACGACAACAACAATACGAAATTGTTGAACAGTGTGGCCGCAGCCATAACTCTGCACCAGAACGGTGGTAATCTGTTGGCCACAACACCATCACCGTCGCCACCCCTCTCCGATAGCGGCAACCAGCAGCAACAATTGAACGGTTGCATAAATCCCAAATTGTTCTTCAATCACGCCCAACAAGTCATGATGATGGAAGCTGCTGCCGCTGCAGCGGCCGCTGCGGCTGCCGCAGTGCAACAGCAACAGTCGCCAATGCATTCGCCACAACCAACAATTGCTACACACCAACAACACCAGCCACAGGATTCGAGGTCCGCCGAGGAAATGCTCCATCAACCCACCAAGACAATGGAACACCAAGATAATGCATCCGTCGATAAGACCTCAAGTGATACTCAGCGCACAACGGCAAAGGACGAGAACAGGTCCACGACCACAATCGAAGGAAATACGCCACCGGATCAGCTCACCGAGGAGGCGGAGGGTGGCGATTGCCCAGCATCgataaataataacaacaacaagaatatCAATAGTTTTAATAGTGATAATAAACATAGTTTAAATGCCAGTTGTGCGGAAACGGAAATGGACAAGACACAGACCACCAGCAACACAGATGGCGCCCTTGCCGAACAGCTGCTACGGGGCAGCGATGAGAGCAGTGGGAAATTGCTGTTGGAGCCCAAGCACTCTGATTTTGTAGCTGCCAAAGAAAAAGAGaTTAAAGCCTTATTTGAAGAAGTCAAACGACTGAGAGCGCTCGAACAAACCCATTTGGTACAAATCCACCGGCTCGAAGAACATTTGGAGGCCAAACGCCAGCATATTGTGCGCTTGGAGGCCAAATTGGATAAACAGCAAATCAATGAAGCTTTACAGCAGACCGCTGTGCCAAGCTCCGAAAAAGAAAGTGGCAGCGTTGAAGCCAATGCCACTCAAGCTACCCAAGACTTGGAAGCGCCACAAATGATCatcgatgatgacgatgacgagaATGATCAGGACGTTGAAGCCGTCGCAGACTTGGCGGAGGAGCGCGAGAAGAGCGTGCCAGCCGTAGACGCCGAAGAGGAGGAGGACGAGGATGAAGACGATAATGATAACTGTGATCTAgacaaagaaaataacaatgataatgaacaaaatcaaaattcaaGCGCCCCCTTGGCCGAAGATGGCGATGAGGGCAATGAGGGCAATGAGGATGCCTGTAGCATTCAAAAGGAATCAATCAAAATCAAAAAGGAAACACAATCTCCTTTATCTTTAGACTCTATCAGCCAACAGAATGCCATTGCTGCCGCTGCAGCAGCGGCTGCCGCCTGCAATAATGATCCCAATAAATTCCAGGAATTACTCATGGAACGCACCAAAGCCTTGGTGGCCGCCGAGGCTTTAAAGAACTCTGAAGaaaattGTTTAGAAAATGCCAACAAGGATGAAAAAAATCCAGCAACATCATCGTCATCTCCCACAAATGTTGCTAAGGCAATAACAACACCGAGCAACAACACGCCCACAGTAAGCGATGTTCAGGAACATGTTGAAGCCTCAAAAGTGCCAAAAATCGAAATATtagacgatgatgatgatgatgataatgagaATCATATCGAACAGCGTGATAATAATGTTAATGACCTTGAGGATAATGTTGTTGAGGACCTTAACGAGAATCCCCTAAAATCTCTAACATCTGAGAGTGATAAAGACAAAGTTATCAATTTGGATAGCGAAAAGTCTTGTGATGATGAGGCCACGGCCACATTTAAACAGAACGTTGAACGTTTCGGTTCTTTGCTGGGCGAAGAATTGGTCAATACCTATTGGAGGCGTGGTTTTGATCAAACCAAATCGCTGTATGCCTCGCAGCAACACCAGCACCAGCAacaccatcatcatcaacatcctACACAACATCTCCAGCAACATCCATTGATGATGCCACAAACCGTCcaatcacaacaacaacaatcacaccaacaacaacagcatcatcatcatttaCAACAACACCATCAGCAGCCGCCTTCGTCGTCGTCcacgtcgtcgtcgttgtcgctGTCGTCGTCTTCGTCTGCTATACTGCAACACCATCAAACACAGCCGCCAGCTCCGCCTTGCGGTCCTTCGTCCACCACTTTGCTTAGTCAAttagttaattccactttttctaCCCCCAACTCAACCACAACTCAAACTTCCTCTTTACGTTCAACAGATGCACACTTTCCACATCatcaccatcaccaccaccaccaacagcagcaactccaccatcaccaccaccaatTGCCTCCTCATTTAGCCGATCATCATGACAAGTCTGCCATGAACCATCATGAGTCGTCGGCCTCCAGTGCCAGTACGCCCAATTTGCCCGATCAGCGTTCAACCGCCGaggagcaacagcagcagcaccatCACAGTGTCTCATTGAACGGTTCGCTCAAGAATTtcgaagacaacaacaacagcctcGGCGCCACACCCACCGGCCATCTGGGCGGTCATCCACACTTACCTCATGGCTTCCTACCCGGTCTACCATTCCAATTCCAAGAGCGTGGCCACTTCCGTTTCGCCGATGATTTGCAATTGCCACCCGGCACTTCAATGGCCGGCCGTCTGGGTGAATCCCTGATACCCAAAGGCGATCCCATGGAGGCCAAATTGCAAGAGATGCTGCGCTACAACATGGACAAGTATGCCAATCAGGCTTTGGACACGCTGCACATATCGCGCCGAGTACGCGAACTGCTGTCGGTGCACAACATTGGCCAGCGCATCTTTGCCAAATACATATTGGGCCTGTCACAGGGCACCGTCTCGGAGTTGTTGTCCAAACCAAAGCCATGGGATAAACTCACCGAGAAAGGACGTGACAGTTACCGCAAAATGCATGCCTGGTCATGTGATGATAACGCCGTGATGCTGCTCAAATCGTTGATACCGAAAAAAGATTCTGGTTTGCCGCCATACGGTGGTGGTCGTGATGATTCCATGTCTGATGATCGCATTGCTCACATTTTAAATGAAGCCTCCTCGTTGATGAAGGGCAGCGGACCGTCTGTtttgcaacagcaacagcagcgtTCTGGTCTGCCCGAAGATTCGCACAGCACTGAGGATTCCAAGTCGCCTCATCAGCCCTGCTCGTCGCCCTTCTACAAGGAACATCTTAAGCCGCAAATGGAGACATCGCTTTCGGCTCCCGGTCACATGCGTCCGGATGAAGTGAATCCTGAGAAAATGGCTCGTCTCTATCAGGAAATAATGGCCCGTGCGCCCCGAGAAGCATTCCCCGGTTTTTTGCTTTCACCCTTTTTCAGCGGTGGCTTACCTGGCGCCGGCATGGGCACCAATGCCTTCCCCGGCCTGGCCGCCGATGAGAACATGCGTCTGGCCTTCGAACGTGAAATGaccaaattgcaacaacaacagcagcagcagcaacactcTCAACCTCCCAACTTTGCCAACTTCTCTAGTCTGATGGCCTTGCAACAGCAAATGTTGAACGGCGCCCAAGACTTATCGCTGTGCAAAGAGGACAGCCTCAAAGACGCCAAACTGAACGGTCAACGCCACTCCTTCGATGGCTCGTCCCAGAACTCACTCAGCAATGCCGGTCAGACTACCCCCAATGCCAAAGAAAACTCTGCCTCAGATGTTGAAAGACTTTATCCCGGTATGGTTAAATCCGAACAGGGCAACAAGACGCCAGCACCGCCACCATCCAGCAACGCTTCCACCACCAACACCAACTCGGCCGCTCCCAGTCCCCTCAGCAATTCCATACTCCCGCCAGCCATGACGCCCACCGATGAGTTCGGCGCCACCGCCAGTCCTTTGCAGCGTATGGCCTCCATTACCAATTCGTTGATAACACAGCCCCCTGTGCCGCCCCATCACACTCCTCAGCAGAGACCCACCAAAGCCGTCTTGCCGCCCATTACCCAGCAACAGTTCGATATGTTCAACAATCTGAACACCGAAGACATTGTGCGTCGCGTCAAAGAAGCCTTATCGCAGTATTCCATCTCTCAGCGTCTGTTCGGCGAATCAGTGCTGGGCCTTTCGCAGGGTTCGGTCTCGGACCTACTCGCCCGCCCCAAGCCCTGGCATATGCTCACCCAGAAGGGTCGCGAACCTTTTATAcgcatgaaaatgttcttgGAAGATGAAAATGCCGTACACAAATTGGTGGCCTCTCAGTATAAGATAGCTCCCGAGAAACTCATGAGAACCGGCAACTACGCCGGTTCGCCACAAATTCCCCAGGGTTTGGTGGGCAAGATGCCGCCCTCCCTGCCCATGCAAAAGATGATGAGTGAACTGAAGTTGCAAGAACCCGCTCATATCATGCAGCAAATGCAAGCGGCGGCCGTCATGTCGGCTGCCAtgcaacaacatcagcagcagcaacaagccGTTCAGCAAAGCCAACAGGCGGCTCAGGCTGCCGTGCAAGCGGCCCAAGCCGCCGCTGCTGCTCAAGCCGCCCAGGCCGCTCAGGTAGCTGCCCAGCAACACCACCAAAGTATGCTTTTGACTTCGCCCGGCTTGCCGCCTCAGCACGCTATTCCTCTTCCTGCCGCCAACTCAAATCCAACATCGGGCACCAGCACGCCAGCCGGTCCGCCATCGGAGAAGAAGCAGCCCATGATGATGCCCATTCACTCACCCCACCAAGCAAATGCCATGCGTAACATGCACCAGCACATGTCACCCACCGTTTATGAGATGGCAGCACTAACTCAAGATTTGGACACTCAGGTTATAACGACCAAAATCAAGGAGGCTCTATTGACCAACAACATTGGCCAGAAGATTTTCGGCGAGGCGGTGTTGGGTCTGTCGCAAGGTTCCGTATCGGAATTACTTAGCAAACCCAAGCCCTGGCATATGTTGTCCATCAAGGGCCGAGAACCGTTCATACGCATGCAGCTGTGGCTGTCGGACGCCAACAATGTCGAACGTCTGCAGGCCCTAAAGAACGAAAGGCGGGAGGCTTCGAAGCGTCGTCGTTCGACTGGACCCAATCAGCAAGACAATAGTTCAGACACTTCCAGCAATGATACCAATGACTTCTACACCAGCAGTCCCGGTCCCGGCTCGGTGGGCAGTGCCGGAGCTCCACCCAACAAGAAGCAACGGGTATTGTTCTCGGAGGAGCAAAAAGAGGCTTTGAGGCTAGCATTCGCTTTGGATCCCTATCCCAATGTGGGCACCATCGAATTCCTGGCCAATGAGTTGGGTCTGGCCACTCGCACAATAACCAATTGGTTCCACAATCATCGCATGCGTTTAAAACAGCAAGTGCCTCACGGTCCGCCCGGCCAGGAAACGAACATACCCACACGAGAGAACACCAATTCGACCCCATTTGATCCCGTCCAGTTCCGCATATTGCTGCAACAGCGACTGCTCGAGATGCACAAAGAACGCATGGGCTTGGGTGGCAACAACCCCTTGCCATATCCACCCTACTTTGCTGCGGCCGCTTTGTTGGGCCGCAGTCTGGCCGGCATGCCCGGTGCCGGTGGTCCCGGAGGCCCCAACGAAGCCGAATTGAGAGCGCTTAATCAAAAATTCCAAGAACAAATGGCCGGCTTGGACTTGTCCATGAGTTCGCTGAAACGCGAGAGAACCGACGACTTCGACGACGACTTGGACGATGGCCATCTGAGTGAGAACGAGAACGATTCACTGGATGGCGACGACAAGGCGGGAGAGTTTAAAGCCTCGGCCTTGAGCAGTTTGAATGCCCagcattttttgaataacatgcGCTTGAATAGGCGCAAACCTGCCGCACCACAATGGGTTAACCCCGCCGTGCCCACGGCGACTGAAGCGGAACGCATCATCAATGGCGTTTGTGTTATGCAGGAGGGCAACGATGAATCGTCCCACAACGATGAGGAGtcccacagcaacaacaagtcGCACAACGACATTGAGGATCCGGACACAGAGCCACCGCATCATTTGGTCATGGAGCCGGAGGTCTTGATCAAACAAGAAAAAGAAGACTGTGAAAGTGATACGGACAAGCAGCACAGCGAGGAGGGTCTGTTGAGTGCCGAGGACAAACTGAGAATGGTGCGCGTGAATCGTTTGAGCAATGAAGAAGAAGCAGTCGCCCCAGTGCCGGCAACGGCGTGGAATTATTAA
Protein Sequence
MQPTLPQTAGTADMDLTAVQSMDWFFKKEQIYLLAQFWQQRATLAEKEVNTLKEQLSTNTPNTDTNSDSDNNLDLSIATTTAANIINTNNTSSDSHHTSSATTNDIPPNHRLSPSYDNNNTKLLNSVAAAITLHQNGGNLLATTPSPSPPLSDSGNQQQQLNGCINPKLFFNHAQQVMMMEAAAAAAAAAAAAVQQQQSPMHSPQPTIATHQQHQPQDSRSAEEMLHQPTKTMEHQDNASVDKTSSDTQRTTAKDENRSTTTIEGNTPPDQLTEEAEGGDCPASINNNNNKNINSFNSDNKHSLNASCAETEMDKTQTTSNTDGALAEQLLRGSDESSGKLLLEPKHSDFVAAKEKEIKALFEEVKRLRALEQTHLVQIHRLEEHLEAKRQHIVRLEAKLDKQQINEALQQTAVPSSEKESGSVEANATQATQDLEAPQMIIDDDDDENDQDVEAVADLAEEREKSVPAVDAEEEEDEDEDDNDNCDLDKENNNDNEQNQNSSAPLAEDGDEGNEGNEDACSIQKESIKIKKETQSPLSLDSISQQNAIAAAAAAAAACNNDPNKFQELLMERTKALVAAEALKNSEENCLENANKDEKNPATSSSSPTNVAKAITTPSNNTPTVSDVQEHVEASKVPKIEILDDDDDDDNENHIEQRDNNVNDLEDNVVEDLNENPLKSLTSESDKDKVINLDSEKSCDDEATATFKQNVERFGSLLGEELVNTYWRRGFDQTKSLYASQQHQHQQHHHHQHPTQHLQQHPLMMPQTVQSQQQQSHQQQQHHHHLQQHHQQPPSSSSTSSSLSLSSSSSAILQHHQTQPPAPPCGPSSTTLLSQLVNSTFSTPNSTTTQTSSLRSTDAHFPHHHHHHHHQQQQLHHHHHQLPPHLADHHDKSAMNHHESSASSASTPNLPDQRSTAEEQQQQHHHSVSLNGSLKNFEDNNNSLGATPTGHLGGHPHLPHGFLPGLPFQFQERGHFRFADDLQLPPGTSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRIFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWSCDDNAVMLLKSLIPKKDSGLPPYGGGRDDSMSDDRIAHILNEASSLMKGSGPSVLQQQQQRSGLPEDSHSTEDSKSPHQPCSSPFYKEHLKPQMETSLSAPGHMRPDEVNPEKMARLYQEIMARAPREAFPGFLLSPFFSGGLPGAGMGTNAFPGLAADENMRLAFEREMTKLQQQQQQQQHSQPPNFANFSSLMALQQQMLNGAQDLSLCKEDSLKDAKLNGQRHSFDGSSQNSLSNAGQTTPNAKENSASDVERLYPGMVKSEQGNKTPAPPPSSNASTTNTNSAAPSPLSNSILPPAMTPTDEFGATASPLQRMASITNSLITQPPVPPHHTPQQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGNYAGSPQIPQGLVGKMPPSLPMQKMMSELKLQEPAHIMQQMQAAAVMSAAMQQHQQQQQAVQQSQQAAQAAVQAAQAAAAAQAAQAAQVAAQQHHQSMLLTSPGLPPQHAIPLPAANSNPTSGTSTPAGPPSEKKQPMMMPIHSPHQANAMRNMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLTNNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQALKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSAGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGPPGQETNIPTRENTNSTPFDPVQFRILLQQRLLEMHKERMGLGGNNPLPYPPYFAAAALLGRSLAGMPGAGGPGGPNEAELRALNQKFQEQMAGLDLSMSSLKRERTDDFDDDLDDGHLSENENDSLDGDDKAGEFKASALSSLNAQHFLNNMRLNRRKPAAPQWVNPAVPTATEAERIINGVCVMQEGNDESSHNDEESHSNNKSHNDIEDPDTEPPHHLVMEPEVLIKQEKEDCESDTDKQHSEEGLLSAEDKLRMVRVNRLSNEEEAVAPVPATAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00816439;
90% Identity
iTF_00817308;
80% Identity
iTF_00817308;