Hdia026003.1
Basic Information
- Insect
- Hydrotaea diabolus
- Gene Symbol
- retn
- Assembly
- GCA_963513945.1
- Location
- OY740720.1:90076974-90117390[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3 1.8e+04 -2.9 0.0 7 40 78 108 75 114 0.72 2 2 4.5e-26 1.9e-22 80.3 0.0 2 89 350 435 349 435 0.96
Sequence Information
- Coding Sequence
- ATGCGAAATCGTGGTTTCCGTTCTTCCTCTGGCCAGtcacatgacgatcactCTGATGACGAACTGCGCGACTGTGATTCGGCTGAAGGTGATCACATCGCAAGAATCGGCGGCTCCCACTTGAACACATCCCTGACCAGCAACGGCGGTGACGTAAGTGGTCACGAGCATCCCAGTGAAATTCAAATGAGccatcatcatcatcatcagtttCCACCGAATCATCCCTTGAATGCTCTGAATAATTTTATGGGCATTAGTGGCTTACATGGCATTCCAAGTATACAGCAGAACGATGTCCTGGAGAAGCTGAAAATGCAAGTTCGTGATATGAAAGTGGGTCTAATGGATCAGGAATATGCTGCTGCTCATGCGGCCGCCTTTGGTGCCAATGTCCTGCCCACACCCATCAATACTGCCTTTACATTGCCGCCCACCACAATGGCATCATTCACACATGCCGCCCAGACATTGGCGGCCCAGGCCGGCGGCAATAGCATGAATTCGCATTTGGGTGCCAACTCGTCTTCGGCTCCATCGGCCGGAGTGCCATCCATTGCCAATGGCAGCCTCAACAGCAATACGAGTTTTTCGTTTACATCACCAACAGCACCAAATACTAAAGACGTTAACCCTGCTTCAAACTCGTCCACATCCAGTGAAACTTCAAACTCGTCACAGCAGAATAATGGCTGGAGTTTTGAGGAACAGTACAAACAGGTCCGGCAGGGCCACAATACGTTGACAACCACTAATGCCGGTGGTTCTTTTGTTGACTGCGATCATCCTCGCTCTCTCATTGGCGTATTATCACCATTACCACCGCCACCCTGGGTGAATGCGAGTGAGCACAAAAAAGCGAAGCTGCGGAACTCCTTGTCTGCTACTGTAGAAGAAGGCAAACAAACATCGGGCACTGATAAAGATCTCGTTACCACTGAAGTCGTCCGTAATGCATTGTCATGGAGTTTGCGGGTTGTTTTCCGCCTGTTTGTCCGTATGTATGTAGAAGTGTGTTGGTTGTACGAAATCAACGACGATCCCAAGCGCAAAGAGTTCCTCGATGAGTTATTTTCCTTTATGCAAAAAAGGGgcACACCCATCAATCGTTTGCCAATTATGGCCAAATCCGTATTGGATCTGTATGAGCTGTACAATTTGGTGATTGCTCGAGGAGGTCTCGTCGACGTCATCAACAAGAAGTTGTGGCAGGAAATCATCAAGGGTCTGCATCTGCCGTCGAGCATAACAAGTGCAGCGTTTACGCTAAGAACACAGTATATGAAGTACTTGTACCCTTACGAATGCGAGAAGAAGAATTTAAGTACCCCGGCTGAGCTGCAAGCGGCCATCGATGGCAACCGACGCGAGGGTCGTCGTTCCAGTTACGGCCAATATGAGGCGATGCACagtcaaatgcaaatgTCGCCGATGGCACGACAGCCGTTGCCAGGCGGAATGCAGCAAATGTCGCCGCTGGCTCTGGTCACACATGCAGCTGCGGCGAACAATCAACAGGCACAGGCAGCTGCCGCACATCACAGATTGATGGCACCCACATTTGGCCAAATGCCAAATCTGGTGAAGCAGGAGATCGAACAGCGAATGATTGAGTATTTGAAATTGATACAAGTGAAAAAGGAGCAGACTGTGCTCTCCAATGGGTCGGCAGGAATTGGCCTGTCGCCGCATCACcaacatcaacaacagcaacatcagcagcagcaacatcagctacaacaacagcagcagcagcaacaacgacaacgaTCGCCAAGTCCGGAGATAAGTCCAAGGGAGGCATTGAATGCTTTGGAAATGTCACGTGTGGCGTTGTGGCAAATGTATCACAACAACACCAGTCCACCCGCGTCAGTGAATGCATCGCCACAAGGTGGCGGCAATGGTGGTGGTATTGGGGCAGAAGCCCAACGCAGCGAAGCTCTAAACCTCTCCGATTCGCCGCCGGGtgtcactttaataaaacgcgagCGAGAACGCGAACCCAGTCCGGAAATGAACGACCGGGACGATTTCCACCACCAACCACCTCCAGCAAAACGTGCCGCATTTCCGGCCAGCTTTTATTTGCCGCCGAGCATGAGCAGCATGGCCGCTGCCGCTGCGGCCGTCAACTTCCACTACAAGAGAAACCACCACGAATCCGACGAAGAAGGCGAGGAGGAGCATCGTGACGATGGCGACCACAACATAACGGCCAACTCTTCTCACGATGACCCCATGGAACTGCAACAACTGAATGGCATAACCGCTCGCCCTCCTCGTCATCATGGAAGCAGCAGCAGTGTGCATAATGATAAGTCTGATGATTCTGCGATTGAAAACTCACCCTCCACCTCGGCAGCGTCAGCCGGAAATGGCAACTCTTCGCCCGTGTCCACCAAGAAAATCCACCTGTCCAAACAGCATGTCCAACAACAGGGCGCCGATACGAACGGCGGCGGTGACGGCGCAGACAGCAACAACTTTACCACAAGAGGCGGCAGTACGTCGTTGGCGCCATTGGATGCATTGAATCTGTTGTCCGGCATGCAATTTCGTGTGACGCGCAACGGTACGAATGCAAATGGCGAACACCAGTTGGCGGTTAACCTTGAATTGAACGGCATCAAATACTCCGGGGTGCTTATTGCGAACACAGCAGCGACAGTTGCCTTAACAGATGCGACCACAACCAACTCAATAGATGGTTGTAACAACGATGAGAGCAACTCTGGTCTAAGCACCAGGGACGACAACTGCAGTTCCAACCTCGCAACGCATTGCACTGAAGCACCGAAGGATTTGGCTGCAATGGATACAGCGCCAGATGCACACGAACTGACAATGTGCGAAACCGACGCACCACTACCGAAGACGAAGCACACAAATCCTGCGATGGCAAATGGCCCCAACACAGCCGCCGCACTCAAAGATGCCCTAATGACATCTTAG
- Protein Sequence
- MRNRGFRSSSGQSHDDHSDDELRDCDSAEGDHIARIGGSHLNTSLTSNGGDVSGHEHPSEIQMSHHHHHQFPPNHPLNALNNFMGISGLHGIPSIQQNDVLEKLKMQVRDMKVGLMDQEYAAAHAAAFGANVLPTPINTAFTLPPTTMASFTHAAQTLAAQAGGNSMNSHLGANSSSAPSAGVPSIANGSLNSNTSFSFTSPTAPNTKDVNPASNSSTSSETSNSSQQNNGWSFEEQYKQVRQGHNTLTTTNAGGSFVDCDHPRSLIGVLSPLPPPPWVNASEHKKAKLRNSLSATVEEGKQTSGTDKDLVTTEVVRNALSWSLRVVFRLFVRMYVEVCWLYEINDDPKRKEFLDELFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHSQMQMSPMARQPLPGGMQQMSPLALVTHAAAANNQQAQAAAAHHRLMAPTFGQMPNLVKQEIEQRMIEYLKLIQVKKEQTVLSNGSAGIGLSPHHQHQQQQHQQQQHQLQQQQQQQQRQRSPSPEISPREALNALEMSRVALWQMYHNNTSPPASVNASPQGGGNGGGIGAEAQRSEALNLSDSPPGVTLIKREREREPSPEMNDRDDFHHQPPPAKRAAFPASFYLPPSMSSMAAAAAAVNFHYKRNHHESDEEGEEEHRDDGDHNITANSSHDDPMELQQLNGITARPPRHHGSSSSVHNDKSDDSAIENSPSTSAASAGNGNSSPVSTKKIHLSKQHVQQQGADTNGGGDGADSNNFTTRGGSTSLAPLDALNLLSGMQFRVTRNGTNANGEHQLAVNLELNGIKYSGVLIANTAATVALTDATTTNSIDGCNNDESNSGLSTRDDNCSSNLATHCTEAPKDLAAMDTAPDAHELTMCETDAPLPKTKHTNPAMANGPNTAAALKDALMTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -