Hcyr000336.1
Basic Information
- Insect
- Hydrotaea cyrtoneurina
- Gene Symbol
- -
- Assembly
- GCA_958296145.1
- Location
- OY282512.1:4384089-4395218[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 9.8 6.6e+02 1.6 1.6 2 23 2052 2076 2051 2076 0.82 2 7 0.011 0.72 10.9 1.6 1 23 2082 2105 2082 2105 0.92 3 7 0.84 57 5.0 1.5 1 23 2109 2132 2109 2132 0.89 4 7 0.0046 0.31 12.1 1.1 1 23 2406 2429 2406 2429 0.95 5 7 3.1e-05 0.0021 18.9 0.8 1 23 2438 2460 2438 2460 0.98 6 7 4.5e-05 0.003 18.4 0.2 1 23 2467 2490 2467 2490 0.97 7 7 1.1e-05 0.00074 20.3 0.4 1 23 2496 2519 2496 2519 0.96
Sequence Information
- Coding Sequence
- ATGATACATAAATTTCGACGGAAATGTCTGAAGGTCCAGGCCCACTTGCGTGGACTCTACGACGAACAGCACCAGCAACTCAAACTCCAGCTGCCTGTGAATGAAGTGGAACGGCAACCGACAAAAGTACCACAGAGTGATGGTGTGACGTTTCCACCAGCATCATCTAAAGACGAACAACTACAAGTGCCCCAGACATCCGGTCGTAGGGATGGCCCAACTACCGTCACCGACAATGATGTCACAAATAGCAAATCGGACCAGCAACAACAGACAACATCGGAGTTGGCAACAACGGCGTTGTCTTTGTCCTCGGATACCAGTGCAGGAAAGAATGTCAATGATGTAAAAACAACCGGCGAAACTGAACCCAAATCACTGCCATTGATCGACAGTGATCGGCCCCAGACAACAGAGACCGTTGAGGCAGCAGCCGCATCTTCATTTAAGGAACAACAAACTACCGGCtctaaacaaaaatgtgataaaGATATGACAAAGATGACGGAGGCCCGGAGAAAACGCAGAAATAGCCTAGATCGCCGAAGGTCAAAGAGCGCCGACGTACCACCAGCCAGCACAACGCAGCCTGCGGCTGGCAATCACCAAAGTACCTCCGAACTGGCCGAAGATGCCCGCCGAGATGCCAGCGAATGCAGTCGTAATCCGTCGGAAAAACGCCGAAAATGTAGAACACGAAGAAGTGACTTGTCCTCGGATACCACATCAGGAAAGACTGCCCATGAAACAGCGGATGTTGATACAGCAGAGACAGCGACAACCGGCGAAACTGAACCAAAATCGGTCCAAACAACAAGGACCGCTGAGGCGGCCACAACGAAACAACAATCTACAGGCATAAGCAGCAGCTGTAATGATTTAATGAAGACGACCGAGGCCCGGAGGAAACGCAGAAACAGCGAAGATCGCCGAAGGTCAAAGAGCACCGACAAAAGTGTTGACAATGTAAAGGACGCCGACGCCACCCCATTGCAGCCCGCTGCAGATAATCACCAAAGTGCCACTGAACCGGCCGACGATGCCCACCATCGTAATCCGACGGAAAAGCGCCGAAAGGGCAGACCACGAAGAAGTGAGCTGTTGAAGCGCAGCAAAAGCAGTCCCGAATGTTGTTATCTGCTGACCAAAGCGGCTCTGAAATCCTATTCCACGGTGACAACGCGCGCCGCCTCATCTGCATATGAAAAGAAGGCCGCCGACTACATCTCTGTAGCCGATGCAGCCGTCATAAGGCCGGAGCAATTGCTTGGGCGACCATTGCAAAGTGAAGCGGCGGGCGAACATCAAGTGCTGGCCAGTGCTGGAGCTGATCCCCAACGCACCAGCCAGACAATCGCAACAGGTTTCTTTAGCCAAGAACATCAACGACAGGTTTCGATGACCGGTAGTTGCACCGGTGGTCTGCTGGCGTCTGCTACTGGAAAAATGCGTAACgataataataacaatgatCATCGTCGTCAGAACGAGGCTGACAACAACGCTAAGGAGTTGTCCCCCTCGCCACGCGACCACCTCTCGACATCGGAGAGATCCAAACATCCAAGTGCCTCCTCCTCGCCAAAGCACAGATCGAAGAGACTCCGTAAAGCCGATGCCAAGGAGGCACTTAATGCCAAAAGACGGGCAGAACAAACACCAAAGTCACAATTGCCAGGGTCAGTTCCGTCGCAAGGGCAACTGGAACAACCACCGCGGCAGCGACGCAAATGCTCTGTGTCACAGTATAacaaacgtgatcatcatcatcatcatcgtcagcatcGTCATAAATTAAGTGAAAAACCAACCATGAAACGTGCCTTATGCTCCTCGACGGCGGCTGCTCCCACCGAACTCAAAGCGGACACAACGAAACGAAGAGGGCGAAGAAGACAGCAAGAAGCTGACGATATGGCAACAAGTTCTACCCtaggacaacaacaactacacgaACAGATCATCCGTCATAAATCGAAAAGACAACAggaacgccaacaacaacaacacacaaagcTCGCTGATGAAACTGCACCAACATCTCACAAAGCCGCAGGGGAGACCGAAACTACCCACAAAGTATCGGCGGCAACGGCCATCGCGAGCATATTCGCAGCCAAAGCGAGTTTAAACCCTCTAAAAGCAAATCCCAACACATTGTCGCCAATGTTTGCATCGTCGTCTGCTGGCTCGTCATCGTTTTACTTGCCAGCGGCCGAAACAGTTGCCGCGGTTACACCTGCCGCTCCGGTTAGGAATCCGGTTAATGCCACGCTGGCATACAATGCCAACGATGTGAAATGGCAACGCAGGCGATCCCAACGTTTgtccacatcatcatcagccTCCTCGCTGTCGTCATCGTCCTCCTCATCGTTATCAAGCACAGACGACGATcaggatgatgatgacgacgacgacgacgatgatgacgacgatgatgatgacgtttaTTACGGGGCCAATGAGTATCGTCATCATCTGCAAGATATTAGAAACTACCACCAACATGTGAACACCCCACCCGTGCCACAGATGTACTTCTGGAAGACAAAAGCTCAAATGAAAGCAAATGCCAACGACATGCAGATGCAAAATATATTCAAAGCCATGGCATCAGCGGAGACGACATCTCTGGATCACATTAAACCGCTAAAGCCGGAAGATCAAGTGACCGTTGCAAGCGATTCCGTTGCGGAAGAGGCAAATTCTTCAACCTGCTCAATTACGGAAGGCCTGCGAACACAGACCCTCGATGATGGCGAAACTAAGGACGGCCCAACCAGCAGTCCTGTGGCAACAAATGAATCGAACTCATCTCAACATGATCATGACAATAACGAGGCTAATAATGAGCAAGCCCCCGTCAAGGTTACACAAAACGGTGAGCGGCCGGAAGAGGCGgtccaaaaacaaattaaactcaAACAACCAACCGATGATGGTCGTTGCGCTGATGATGACGATTCCGAAATTAGCTGCAACTCCAAGGAATTTAAAAACGAAAAGGACGGAGACGACAACGCCGCCAAACAGAAGCCGACAATATCAATACCCACCACTAACACAGATGATGCCACTACCACGTTAACGCCTTCGTCGGACAACCAAACCGGCGGTTGCAGTGatactgctgctgctactgctgctgctggagATAATCGTAGTCGCGGTGgcatgaaattaattttacaacGCCGCAGTAGTACCCGCTTTACGTGCCTTCGCAAAGAGGAAGCAAACACCTCAGCGCCGTCCTCCGGCTCGTCATCGCCGGCGCGCAAACGAAAACGCAAACAGCGTAAAGAGGAGGAAGAGGCTTCCGCCGCCGATCGGCTCTCGGCCATGGAGAAAACTAGCGATCGGCGGCTGAAGGAAATCGTCCGGCCGAACGATGAAACCCACGATCTCAAACGAGAAACCAAAAGACACAAGAAAGTGGAAGTGGAAGTGGCGACCATCGAACTGGCCAGCATTCAAACGAAAaaccataaaacaaaacacaaggCCAGCAATGACAATCAAACACATGAGGGGGGAGATGCCGCCATTAGCCCAGGGCCCCAGTTGGAAGAGCACCAAACCGAGGACTGCGATGAAGCAACTACAGCCACAACGCGTGTAGCTGATGATCAGCTACATAAATCTATGGTCGATGACGTTGCAGTGGAattggaaaaggaaaaggacAATGCAGCCATTGGGCCGGAAGCAGAGGACAATCAAAAACTTGTGATTCGTGTGCCTTTGGCTGCGTTGACGCAGAACTTTAAAAGAATGCATTTAACGAAAGACAATGACGACGATGGACAGGGCAAAGAGAATCAATTGGACCAAATTGGCGAAAAGACCGAAGCATCAGCGCAATTGGACACGAATCCTACTAATGAATCGGAGAATCTCCCGAACAAAGTCAAGGAAAAGATAGATCTCAGTGAAATCGCTGCACCCGTCACACATGATACACACAATGTGAACAAAAGCGAGGAAACCCCTGAGGAAGAGATCCAATGTGAGAACGCCAAGTCCGAACCAAGGGACGTTGTCAAAACGATTGAAATCTCTTGTGAAACGAATGCAATGGAGCAGATGCATCCGGCCGACAAAGATCCAACGTCAACAGGCTCACCCGATGATATTCTCCCGATGACCTCCAATGATGCCAATACAATGGAAAACTCAACGGTCGTGGAACAGAATGAAATCGTCACTCCCAGCAGTTGCAAGTCTCAAGGAGCACCGCTGCCCGATTGCTTGGCAATCAGTTCGTTGGCACCGGAAATATTAGAATTCGTCCAAGAAACCGAATCCAGGGGAGCAGAAGAAATATCCGCCTCGCCGGGTTTTTGTGGTGCCTCATCGAAAATAACCGATTTCatcaatgactttcaaaataactGCATCAATTCGCCCGAAGCTGAGGCGGATGTCAACACCATGGATGTACTGCCACCATTGGCAGCGGCAACCAATCCAAATCTGAGTGATGAAATACGTGATGTGGAAGATACGCTGAATGGTATACTGAGTGAAATGCACGATCGTGATATGTATACGCCACGTTCAGGTGAGACCGAAGATTTTCTAGCACATTCATCCATATATTCACCAATGACAGACGCTCCCACAACTCCATCCCAAAGCTTGTATGCTGAAAGTCCCTGTACCGTAAATAGTAATCCCATGTCTCGCAGTCCTTTCATTCAATCACAAATGGACTATAATGCCATGACACCACAAAGTAATCACAGTAGTAGCGTAAGTGGCCACACCACTGCTACAATGAGTAGTAGCAGCAGTAGTAGTAGTAGCCAGCtcaatggtggtggtggtggtggcggcggcggcgctGGTGGGGCATCCAGTGATCATTTCCATTCTTACACAGACTGTTTCGCCGAGGAGAGTACGCAGTCGGAGTTGATTGGCTTCCAAAATGACATACCCTGTTTCGAGAACATCGATTTGCCGCCAACTGGCGACGCCGCAGACGAACTACTGGCAATTCCGAACGATGCCGAGGAAACGCTGACACCGTCCAAGCAATACACCAACAAGGATCTACTCGAGTCTTTGGATAAGGCACCGGACATTAAAAAGGACCTGGTGGTAATTACCACCGACACGGTGGAGCCAGCAGTCATCGAACCGGAAGCAACGTCTTTACCGGCGGACCTGGCGCAAATAGCGGCAGTCCCCGAAAAACCAACAGCCACTGTTAGCGTGGAATTGCCCGAAGCAACTGTATCATACATTGCCGAAGAGATTGACCCCACCATTATCCAAGTAGACTCGATGCCAACTACTCAGCAGATCTCGTGTGATGCCATTGTGACGCCCGATACGGTAGCAGCTACGCACCAGCAGTATGTGTTGACGAATACGCCGCACGGTCCCGTTTTCATAAGCACTCCGCCCGAGAGCTCGCAACAACAGGCGCAACAGCAAAACATCCAATATGTTACCCTGGACTCCAATAGTTCCGCCTCCAAGTTGGGCTGGTCAAATCAGCCAGCACCCGCAGCCGCGGCCACTTACTTCCTAAATGCCGCCGGTGAAGTCTATCTAAGCAATTCGACTTTCAATACCTTGCTGGTGCCGCCGCAGCCAACCGCCGCCACAGCTCAATCATCTGCCATGGACACCAATGAAAACTATCTGCAAGTTTATCAAGGACAACCgcagcagcaccaccaacaccaccaccagcagcagcagcaacaacaaccgaacaacaacaatgccccACAATATATAATGTTGGTGAACAATTTGACCACCGGCGGCCAGCAATACATTACAAATCCCAGTGCAATGGGCACCTCGACGGTTCTACTGCACACCCAAGTGCCAAACAACAACTGCAGCTACATAAACTCGCAGCCGGCGTCGGAAGAATTGGACCGAAGTGCGACCACAATGCCCACATTTTCCATAGCCACAACGATTCCCGGCCAGCATGCGACCGTCTCTCTGGCCCCAGACAACGAGGAACAACggacaccgacaccgacaccgCCGCCAGTCCAACAGCAAGAAACACGCCACCAAACTGTACAAAAACTATTGCAGCAAAAGCTGCTGCAACAGAAAGCAGCTGACGTCGCCATAAAACCTCGGTCCCCAAACAATCGGACCCAAAAGATAAATCTTGTCTGTCGCTTCTGTCACAAGCGGCCCAAGTTCACCAATAACGTGGACTACAGCAATCACATCATCACCATGCATCCGGCGGAGAAACCCTACAATTGTGACTATTGCCCCAAGCATTTCCAGCGACGCAGTGAGCGACAGGATCATGTGGCCCAAATCCATGGTTCGCGCTACCAGTGTGCCCAATGCGGTGTGAGCTTCTGCGCCCAACGGGCTCTGGACTTCCATTTGCAAAAGTATCATGCGTCCTCTCTGACCTGTTCCATACCACCGCGTATTGCAACCGTAGCACCCACACAAcagttgttgtcgtcgtcgtcgtcgtcggcaTCCGCATCCTCGATGCCAGCCGTCGTAAATCATTTACAACAAAACTCCACCTCTTCGGCATCGTCGTCAGCATCCTCTCCGACTACATATCATTTGTTACACAACAATGCCAACGCTCAACAACAACGATTGGTTCGCGGCGTTGACGATGTGCATACACACAACGCCGAAGATGTGGAGGAAGaggccaaaaacaacaaatgctCTTTCGATTCGCAATTGGACATTATGGACGAAACTACAGCGActcaccaacagcagcagctgcaacagcaacaacaccaccaccaacaacaacaacaacaacaacattatcagAAACCGACTCGCAAATTGTGTTGTCCCGATTGTGATGGTGATGACGAAAGTTGCTGTTCTGTGAAAAATAATCCGCCGAATAACCACAAACAATTATTCAATCAGCAGCCATACGCAGGCGGTTATCAGCCACCGCCACACATTACGATACCTTCGCCCGAGCAGACTGAACCAGATTCCACCACAACGTTGCGGCATTTCCGTAAGAACCCCATGAAATCCCCCACGATAGTTTCCACGTCCAGTTCCAGCAACAGCAGTTGCATCACATATTCTCCGTGCgtctacagcaacaacagcggcggcggcagcagcaacaataacaacaacaacaacaatacatgcTATGGATCGTCTTCGTCGGGTGGCGTTAAATACTTTGCAGCGGAAAAGTATATGGTATCCCGTGATATGCACAATTGTCACTTGTGCGATGATGTATTCCCCACTGCGAACGCATTGCGCCGGCATCGGAACATTGCCCACAACCACCACGGCATCACTATGCCATTTGTTTGCACGATATGCAAGAGGGGCTTCCGTCTGCGCAACGCTTTGCAGCGGCACATGGAAACGCACGATGCCGAGGGACGACCCTATGAGTGCAACATCTGTCAAGTGCGTTTCCCGCGACCCTCACAGCTAACGTTGCACAAACTGACGGTGCATAAATTCGAAAGGGTACATACATGCGATGAATGTGGCAAACAATTTGCCACCGAAAGTTCTCTGAAGGCCCATGAAAAGGTGGCCCACGAAGCCAATTCGATGCCTTTGCCGTTTGCCTGCGTCTACCTGGAGGCGCCAAAACATCAAAAGCCCCGTGTATCCAAAGAGTAG
- Protein Sequence
- MIHKFRRKCLKVQAHLRGLYDEQHQQLKLQLPVNEVERQPTKVPQSDGVTFPPASSKDEQLQVPQTSGRRDGPTTVTDNDVTNSKSDQQQQTTSELATTALSLSSDTSAGKNVNDVKTTGETEPKSLPLIDSDRPQTTETVEAAAASSFKEQQTTGSKQKCDKDMTKMTEARRKRRNSLDRRRSKSADVPPASTTQPAAGNHQSTSELAEDARRDASECSRNPSEKRRKCRTRRSDLSSDTTSGKTAHETADVDTAETATTGETEPKSVQTTRTAEAATTKQQSTGISSSCNDLMKTTEARRKRRNSEDRRRSKSTDKSVDNVKDADATPLQPAADNHQSATEPADDAHHRNPTEKRRKGRPRRSELLKRSKSSPECCYLLTKAALKSYSTVTTRAASSAYEKKAADYISVADAAVIRPEQLLGRPLQSEAAGEHQVLASAGADPQRTSQTIATGFFSQEHQRQVSMTGSCTGGLLASATGKMRNDNNNNDHRRQNEADNNAKELSPSPRDHLSTSERSKHPSASSSPKHRSKRLRKADAKEALNAKRRAEQTPKSQLPGSVPSQGQLEQPPRQRRKCSVSQYNKRDHHHHHRQHRHKLSEKPTMKRALCSSTAAAPTELKADTTKRRGRRRQQEADDMATSSTLGQQQLHEQIIRHKSKRQQERQQQQHTKLADETAPTSHKAAGETETTHKVSAATAIASIFAAKASLNPLKANPNTLSPMFASSSAGSSSFYLPAAETVAAVTPAAPVRNPVNATLAYNANDVKWQRRRSQRLSTSSSASSLSSSSSSSLSSTDDDQDDDDDDDDDDDDDDDDVYYGANEYRHHLQDIRNYHQHVNTPPVPQMYFWKTKAQMKANANDMQMQNIFKAMASAETTSLDHIKPLKPEDQVTVASDSVAEEANSSTCSITEGLRTQTLDDGETKDGPTSSPVATNESNSSQHDHDNNEANNEQAPVKVTQNGERPEEAVQKQIKLKQPTDDGRCADDDDSEISCNSKEFKNEKDGDDNAAKQKPTISIPTTNTDDATTTLTPSSDNQTGGCSDTAAATAAAGDNRSRGGMKLILQRRSSTRFTCLRKEEANTSAPSSGSSSPARKRKRKQRKEEEEASAADRLSAMEKTSDRRLKEIVRPNDETHDLKRETKRHKKVEVEVATIELASIQTKNHKTKHKASNDNQTHEGGDAAISPGPQLEEHQTEDCDEATTATTRVADDQLHKSMVDDVAVELEKEKDNAAIGPEAEDNQKLVIRVPLAALTQNFKRMHLTKDNDDDGQGKENQLDQIGEKTEASAQLDTNPTNESENLPNKVKEKIDLSEIAAPVTHDTHNVNKSEETPEEEIQCENAKSEPRDVVKTIEISCETNAMEQMHPADKDPTSTGSPDDILPMTSNDANTMENSTVVEQNEIVTPSSCKSQGAPLPDCLAISSLAPEILEFVQETESRGAEEISASPGFCGASSKITDFINDFQNNCINSPEAEADVNTMDVLPPLAAATNPNLSDEIRDVEDTLNGILSEMHDRDMYTPRSGETEDFLAHSSIYSPMTDAPTTPSQSLYAESPCTVNSNPMSRSPFIQSQMDYNAMTPQSNHSSSVSGHTTATMSSSSSSSSSQLNGGGGGGGGGAGGASSDHFHSYTDCFAEESTQSELIGFQNDIPCFENIDLPPTGDAADELLAIPNDAEETLTPSKQYTNKDLLESLDKAPDIKKDLVVITTDTVEPAVIEPEATSLPADLAQIAAVPEKPTATVSVELPEATVSYIAEEIDPTIIQVDSMPTTQQISCDAIVTPDTVAATHQQYVLTNTPHGPVFISTPPESSQQQAQQQNIQYVTLDSNSSASKLGWSNQPAPAAAATYFLNAAGEVYLSNSTFNTLLVPPQPTAATAQSSAMDTNENYLQVYQGQPQQHHQHHHQQQQQQQPNNNNAPQYIMLVNNLTTGGQQYITNPSAMGTSTVLLHTQVPNNNCSYINSQPASEELDRSATTMPTFSIATTIPGQHATVSLAPDNEEQRTPTPTPPPVQQQETRHQTVQKLLQQKLLQQKAADVAIKPRSPNNRTQKINLVCRFCHKRPKFTNNVDYSNHIITMHPAEKPYNCDYCPKHFQRRSERQDHVAQIHGSRYQCAQCGVSFCAQRALDFHLQKYHASSLTCSIPPRIATVAPTQQLLSSSSSSASASSMPAVVNHLQQNSTSSASSSASSPTTYHLLHNNANAQQQRLVRGVDDVHTHNAEDVEEEAKNNKCSFDSQLDIMDETTATHQQQQLQQQQHHHQQQQQQQHYQKPTRKLCCPDCDGDDESCCSVKNNPPNNHKQLFNQQPYAGGYQPPPHITIPSPEQTEPDSTTTLRHFRKNPMKSPTIVSTSSSSNSSCITYSPCVYSNNSGGGSSNNNNNNNNTCYGSSSSGGVKYFAAEKYMVSRDMHNCHLCDDVFPTANALRRHRNIAHNHHGITMPFVCTICKRGFRLRNALQRHMETHDAEGRPYECNICQVRFPRPSQLTLHKLTVHKFERVHTCDECGKQFATESSLKAHEKVAHEANSMPLPFACVYLEAPKHQKPRVSKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -